Kenny's research focuses upon developing and applying wide-scale spatial transcriptomics approaches to analyse human cell diversity.

My research combines state-of-the-art single molecule in situ hybridisation and sequencing technologies with cutting edge high-throughput microscopy to visualise the expression of genes within human tissues in a spatially resolved manner.

Kenny Roberts, Bayraktar lab, Wellcome Sanger Institute.
Cortical layers in mouse brain. Kenny Roberts, Wellcome Sanger Institute.

My role incorporates two main themes:

  • Technology development and establishment. The world of spatial genomics and transcriptomics has exploded in recent years, along with the breadth of technologies available. I work closely with external collaborators and industrial partners to develop, transfer, and establish spatial technologies such as in situ sequencing and NanoString WTA, as well as adjacent imaging technologies such as flow cell-mediated cyclic microscopy, within the Cellular Genetics programme.
  • Biological application of spatial technologies. I collaborate closely with colleagues in histology, microscopy, and image analysis to generate spatially-resolved biological data that complement single cell transcriptomic approaches. Together, these themes are the bedrock of many Human Cell Atlas projects: my current projects include mapping of the female reproductive system and maternal-foetal interface in collaboration with Roser Vento-Tormo’s group, and mapping of the developing foetal limb with Sarah Teichmann’s group.

Previously, I wrote my doctoral thesis on the characterisation of a highly conserved long non-coding RNA CEROX1, a novel regulator of mitochondrial energy metabolism and central nervous system development.

My timeline

 

My publications

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