Dr Magnus Manske | Senior Staff Scientist

Manske, Magnus


  • Wikidata as a knowledge graph for the life sciences.

    Waagmeester A, Stupp G, Burgstaller-Muehlbacher S, Good BM, Griffith M et al.

    eLife 2020;9

  • Genetic architecture of artemisinin-resistant Plasmodium falciparum.

    Miotto O, Amato R, Ashley EA, MacInnis B, Almagro-Garcia J et al.

    Nature genetics 2015;47;3;226-34

  • Optimized whole-genome amplification strategy for extremely AT-biased template.

    Oyola SO, Manske M, Campino S, Claessens A, Hamilton WL et al.

    DNA research : an international journal for rapid publication of reports on genes and genomes 2014;21;6;661-71

  • Adaptive introgression between Anopheles sibling species eliminates a major genomic island but not reproductive isolation.

    Clarkson CS, Weetman D, Essandoh J, Yawson AE, Maslen G et al.

    Nature communications 2014;5;4248

  • The NGS WikiBook: a dynamic collaborative online training effort with long-term sustainability.

    Li JW, Bolser D, Manske M, Giorgi FM, Vyahhi N et al.

    Briefings in bioinformatics 2013;14;5;548-55

  • Multiple populations of artemisinin-resistant Plasmodium falciparum in Cambodia.

    Miotto O, Almagro-Garcia J, Manske M, Macinnis B, Campino S et al.

    Nature genetics 2013;45;6;648-55

  • Plasmodium falciparum-like parasites infecting wild apes in southern Cameroon do not represent a recurrent source of human malaria.

    Sundararaman SA, Liu W, Keele BF, Learn GH, Bittinger K et al.

    Proceedings of the National Academy of Sciences of the United States of America 2013;110;17;7020-5

  • Efficient depletion of host DNA contamination in malaria clinical sequencing.

    Oyola SO, Gu Y, Manske M, Otto TD, O'Brien J et al.

    Journal of clinical microbiology 2013;51;3;745-51

  • Genome-wide screen identifies new candidate genes associated with artemisinin susceptibility in Plasmodium falciparum in Kenya.

    Borrmann S, Straimer J, Mwai L, Abdi A, Rippert A et al.

    Scientific reports 2013;3;3318

  • Analysis of Plasmodium falciparum diversity in natural infections by deep sequencing.

    Manske M, Miotto O, Campino S, Auburn S, Almagro-Garcia J et al.

    Nature 2012;487;7407;375-9

  • Optimizing Illumina next-generation sequencing library preparation for extremely AT-biased genomes.

    Oyola SO, Otto TD, Gu Y, Maslen G, Manske M et al.

    BMC genomics 2012;13;1

  • An In-Solution Hybridisation Method for the Isolation of Pathogen DNA from Human DNA-rich Clinical Samples for Analysis by NGS.

    Smith M, Campino S, Gu Y, Clark TG, Otto TD et al.

    The open genomics journal 2012;5

  • Characterization of within-host Plasmodium falciparum diversity using next-generation sequence data.

    Auburn S, Campino S, Miotto O, Djimde AA, Zongo I et al.

    PloS one 2012;7;2;e32891

  • Population genomic scan for candidate signatures of balancing selection to guide antigen characterization in malaria parasites.

    Amambua-Ngwa A, Tetteh KK, Manske M, Gomez-Escobar N, Stewart LB et al.

    PLoS genetics 2012;8;11;e1002992

  • An effective method to purify Plasmodium falciparum DNA directly from clinical blood samples for whole genome high-throughput sequencing.

    Auburn S, Campino S, Clark TG, Djimde AA, Zongo I et al.

    PloS one 2011;6;7;e22213

  • An optimized microarray platform for assaying genomic variation in Plasmodium falciparum field populations.

    Tan JC, Miller BA, Tan A, Patel JJ, Cheeseman IH et al.

    Genome biology 2011;12;4;R35

  • Drug-resistant genotypes and multi-clonality in Plasmodium falciparum analysed by direct genome sequencing from peripheral blood of malaria patients.

    Robinson T, Campino SG, Auburn S, Assefa SA, Polley SD et al.

    PloS one 2011;6;8;e23204

  • LookSeq: a browser-based viewer for deep sequencing data.

    Manske HM and Kwiatkowski DP

    Genome research 2009;19;11;2125-32

  • SnoopCGH: software for visualizing comparative genomic hybridization data.

    Almagro-Garcia J, Manske M, Carret C, Campino S, Auburn S et al.

    Bioinformatics (Oxford, England) 2009;25;20;2732-3

  • SNP-o-matic.

    Manske HM and Kwiatkowski DP

    Bioinformatics (Oxford, England) 2009;25;18;2434-5

  • Genome-wide and fine-resolution association analysis of malaria in West Africa.

    Jallow M, Teo YY, Small KS, Rockett KA, Deloukas P et al.

    Nature genetics 2009;41;6;657-65

  • A global network for investigating the genomic epidemiology of malaria.

    Malaria Genomic Epidemiology Network

    Nature 2008;456;7223;732-7

  • The RNA WikiProject: community annotation of RNA families.

    Daub J, Gardner PP, Tate J, Ramsköld D, Manske M et al.

    RNA (New York, N.Y.) 2008;14;12;2462-4

Manske, Magnus