PlasmidTron

A kmer based approach for identifying plasmids.

A tool to assemble parts of a genome responsible for a trait.

Further information

For more information and advice on using this software please see our GitHub page.

PlasmidTron is available under GPL3.

If you make use of this software in your research, please cite as:

PlasmidTron: assembling the cause of phenotypes and genotypes from NGS data

Andrew J Page, Alexander Wailan, Yan Shao, Kim Judge, Gordon Dougan, Elizabeth J. Klemm, Nicholas R. Thomson, Jacqueline A. Keane, 2018, Microbial Genomics 4(3); doi: 10.1099/mgen.0.000164

Contact

If you need help or have any queries, please contact us using the details below.

If you need help or have any queries, please contact us using the details below.

Email: path-help@sanger.ac.uk

Our normal office hours are 8:30-17:00 (GMT) Monday to Friday.


Sanger Institute Contributors

Previous contributors

Photo of Dr Andrew Page

Dr Andrew Page

Principal Computer Programmer