PlasmidTron
A kmer based approach for identifying plasmids.
A tool to assemble parts of a genome responsible for a trait.
Downloads
Please see our GitHub page for download and installation instructions.
Further information
For more information and advice on using this software please see our GitHub page.
PlasmidTron is available under GPL3.
If you make use of this software in your research, please cite as:
PlasmidTron: assembling the cause of phenotypes and genotypes from NGS data
Andrew J Page, Alexander Wailan, Yan Shao, Kim Judge, Gordon Dougan, Elizabeth J. Klemm, Nicholas R. Thomson, Jacqueline A. Keane, 2018, Microbial Genomics 4(3); doi: 10.1099/mgen.0.000164
Contact
If you need help or have any queries, please contact us using the details below.
If you need help or have any queries, please contact us using the details below.
Email: path-help@sanger.ac.uk
Our normal office hours are 8:30-17:00 (GMT) Monday to Friday.
Sanger Institute Contributors
Previous contributors
Dr Andrew Page
Principal Computer Programmer