This software converts GFF3 files from the annotation tool Prokka into a format that is suitable for submission to EMBL.
Download and Installation
Please see our GitHub page for download and installation instructions.
Learn and Support
For more information and advice on using this software please see our GitHub page.
License and Citation
gff3toembl is available under GPL3.
If you make use of this software in your research, please cite as:
"GFF3toEMBL: Preparing annotated assemblies for submission to EMBL", Andrew J. Page, Sascha Steinbiss, Ben Taylor, Torsten Seemann, Jacqueline A. Keane, The Journal of Open Source Software, 1 (6) 2016. http://dx.doi.org/10.21105/joss.00080
If you need help or have any queries, please contact us using the details below.
The Pathogen Informatics team develop and maintain software applications and systems to support the research activities of the Parasites and Microbes programme. We develop and maintain scalable and robust automated tools for sequence and annotation tracking and analysis and provide ad-hoc informatics support and training to the researchers in the programme.