We have sequenced a large number of bacterial genomes at the Sanger Institute and have made all our sequence data freely available on relevant open-access international databases. If you would like to know more about history of the projects and the people who were involved, please click on the links below.
Archive Page
This page is maintained as a historical record and is no longer being updated.
This page is a historical record of the work carried out at the Sanger Institute.
All the data pages listed below are no longer being supported.
All the the data has now been transferred to relevant open-access international databases for ease of access and use.
- Klebsiella (klebsiella3189)
Klebsiella pneumoniae diversity - Streptococcus pneumoniae (streptococcus-pneumoniae2245)
Global Pneumococcal Sequencing (GPS) study I - Klebsiella pneumoniae (klebsiella-pneumoniae2485)
A local dissection of the longitudinal trends in the genetic diversity and antimicrobial resistance amongst Klebsiella pneumoniae and Enterobacter sp. - Enterobacter (enterobacter2485)
A local dissection of the longitudinal trends in the genetic diversity and antimicrobial resistance amongst Klebsiella pneumoniae and Enterobacter sp. - Klebsiella pneumoniae (klebsiella-pneumoniae3189)
Klebsiella pneumoniae diversity - Mycobacterium (mycobacterium2047)
Whole genome sequencing of pathogenic strains of Mycobacterium abscessus - Bifidobacterium (bifidobacterium3258)
Role of early life gut microbiota in colonisation resistance development - Staphylococcus aureus (staphylococcus-aureus3660)
Multi-drug resistant organisms in acute hospitals and intermediate and long term care facilities - Staphylococcus (staphylococcus3660)
Multi-drug resistant organisms in acute hospitals and intermediate and long term care facilities - Streptococcus (streptococcus2245)
Global Pneumococcal Sequencing (GPS) study I - Klebsiella (klebsiella2485)
A local dissection of the longitudinal trends in the genetic diversity and antimicrobial resistance amongst Klebsiella pneumoniae and Enterobacter sp. - Salmonella (salmonella3076)
Sequencing Salmonella Paratyphi A samples - Streptococcus (streptococcus1760)
Streptococcus pyogenes (GAS strains) diversity - Streptococcus (streptococcus1922)
Population genomics of Streptococcus pneumoniae in the presence of vaccine and antimicrobial treatment - Salmonella (salmonella234)
Pigeon adapted variants of DS. Typhimurium - Staphylococcus (staphylococcus2282)
Virulent Australian Staphylococcus aureus ST93; population structure, transmission dynamics and clinical correlates - Shigella (shigella2898)
Vaccination against Shigella and ETEC - Brevibacterium (brevibacterium3454)
Genomic characterization of bladder bacteria from healthy and infected women - Escherichia (escherichia2193)
Comparative genome sequence analysis of the globally disseminated Escherichia coli ST131 lineage - Klebsiella pneumoniae (klebsiella-pneumoniae3487)
AMR Enterobacteriaceae in Blantyre - Escherichia coli (escherichia-coli576)
Retrospective 0157:H7 TraDIS from screen in calves - Prevotella (prevotella3454)
Genomic characterization of bladder bacteria from healthy and infected women - Streptococcus pyogenes (streptococcus-pyogenes2027)
Comparative RNA-seq analysis of three bacterial species - Escherichia coli (escherichia-coli3305)
Sequencing bacterial genomes - Escherichia coli (escherichia-coli2090)
Global diversity of Shigella species - Morganella morganii (morganella-morganii2359)
HPACC Murray project - Bifidobacterium (bifidobacterium3454)
Genomic characterization of bladder bacteria from healthy and infected women - Chlamydophila (chlamydophila641)
Chlamydia trachomatis pilot - Neisseria (neisseria2589)
Global dataset of Neisseria gonorrhoeae spanning 2 decades to study global spread through the dissemination of drug resistant clones - Citrobacter (citrobacter2119)
Relationship of MLST structure of Escherichia coli species to genomic organisation complexity - Streptococcus pneumoniae (streptococcus-pneumoniae2842)
Integration of the host and pathogen genetics in bacterial meningitis - Burkholderia (burkholderia2101)
Burkholderia pseudomallei – evolutionary origin and spread - Salmonella (salmonella405)
Salmonella Enteritidis Invasive (NTS) - Klebsiella (klebsiella2117)
Understanding intrinsic antibiotic resistance in Klebsiella pneumoniae - Streptococcus (streptococcus1696)
Streptococcus suis genome comparisons - Cronobacter sakazakii (cronobacter-sakazakii2880)
Multi Drug Resistant Gram Negative Rods (MDR-GNR) sequencing study - Micrococcus (micrococcus3454)
Genomic characterization of bladder bacteria from healthy and infected women - Campylobacter (campylobacter2310)
Determination of spirality factors in Campylobacter jejuni - Ruminococcus (ruminococcus1765)
MetaHIT Genome Improvement - Staphylococcus (staphylococcus2106)
Staphylococcus aureus (USFL) study - Enterococcus (enterococcus2845)
Enterococci genome sequencing - Staphylococcus aureus (staphylococcus-aureus2170)
Staphylococcus aureus (EOE) study - Salmonella (salmonella217)
Salmonella Typhi fluoroquinolone resistance study - Staphylococcus (staphylococcus2462)
Staphylococcus aureus (MRSA) hospital samples - Klebsiella pneumoniae (klebsiella-pneumoniae3740)
Determining plasmid content of Klebsiella and Enterobacter samples from Addenbrookes hospital - Staphylococcus aureus (staphylococcus-aureus2097)
MRSA library sequencing - Peptoclostridium difficile (peptoclostridium-difficile498)
Clostridium difficile ribotype 017 study - Salmonella (salmonella697)
Salmonella enterica diversity - Neisseria (neisseria2842)
Integration of the host and pathogen genetics in bacterial meningitis - Peptoclostridium (peptoclostridium618)
Clostridium difficile genomic stability - Shigella (shigella3533)
Bloodstream surveillence across Africas - Streptococcus pyogenes (streptococcus-pyogenes3095)
PacBio sequencing of Streptococcus spp. - Paralactobacillus selangorensis (paralactobacillus-selangorensis2233)
Lactobacillus in severe early childhood caries - Escherichia coli (escherichia-coli2359)
HPACC Murray project - Acinetobacter (acinetobacter3305)
Sequencing bacterial genomes - Pseudomonas (pseudomonas2682)
Pseudomonas aeruginosa genome sequencing study - Streptococcus (streptococcus1717)
Streptococcus pneumoniae evolution and population structure during longitudinal sampling in a defined human population - Actinotignum (actinotignum3454)
Genomic characterization of bladder bacteria from healthy and infected women - Streptococcus (streptococcus2087)
Genomic characterisation of uropathogenic Streptococcus agalactiae - Mycoplasma (mycoplasma2902)
Genome sequencing of Mycoplasma genitalium strains - Neisseria (neisseria287)
Discovery of sequence diversity in Neisseria spp. - Staphylococcus aureus (staphylococcus-aureus2662)
Veterinary hospital MRSA infection study - Salmonella (salmonella582)
Mali iNTS – Stanleyville - Escherichia (escherichia2544)
Unravelling the influence of stx phage transduction on gene expression of atypical EPEC - Streptococcus pyogenes (streptococcus-pyogenes655)
Streptococcus pyogenes genome architecture - Enterobacter (enterobacter2731)
TraDIS to study novel antibiotic targets - Chlamydophila (chlamydophila1707)
Blautia producta genome comparisons - Staphylococcus (staphylococcus361)
Discovery of sequence diversity in Staphylococcus aureus ST398 - Stenotrophomonas (stenotrophomonas1943)
Diversity of MRSA - Roseburia (roseburia1921)
MetaHIT_KT01 - Streptococcus pneumoniae (streptococcus-pneumoniae1943)
Diversity of MRSA - Klebsiella pneumoniae (klebsiella-pneumoniae2117)
Understanding intrinsic antibiotic resistance in Klebsiella pneumoniae - Peptoclostridium (peptoclostridium2951)
Clostridium difficile contaminating strains - Streptococcus (streptococcus1688)
Population structure and diversity in non-encapsulated Streptococcus pneumoniae - Citrobacter (citrobacter2985)
TraDIS method optimisation and validation - Streptococcus pneumoniae (streptococcus-pneumoniae517)
Pneumococcal in morbus diversity (QEH, Blantyre, Malawi) - Staphylococcus aureus (staphylococcus-aureus304)
Genetic diversity in Staphylococcus aureus (European collection) - Streptococcus pneumoniae (streptococcus-pneumoniae2004)
Impact of HIV on nasopharyngeal carriage of Streptococcus pneumoniae - Salmonella (salmonella2195)
Phylogenomics of invasive non-typhoidal Salmonella (NTS) disease in Southern Vietnam - Escherichia (escherichia487)
E. coli MiniTn5 sequencing - Chlamydophila (chlamydophila445)
Chlamydial genome assembly - Escherichia coli (escherichia-coli3627)
Study of novel antibiotic targets - Escherichia (escherichia2600)
Variation of DNA damage and repair along a bacterial genome - Salmonella (salmonella441)
TraDIS on salmonella typhimurium, Tn5 macrophages - Klebsiella (klebsiella2512)
Molecular epidemiology of Klebsiella pneumoniae invasive isolates from Kilifi - Mycobacterium (mycobacterium3367)
Sequence analysis of Mycobacterium tuberculosis esx region mutants - Staphylococcus aureus (staphylococcus-aureus1719)
Staphylococcus aureus (MRSA) transmission in a London hospital - Escherichia (escherichia3256)
TraDIS to study T6SS in Pseudomonas aeruginosa - Streptococcus (streptococcus362)
Genetic diversity on Streptococcus pneumoniae in Malawi 2 - Haemophilus (haemophilus3454)
Genomic characterization of bladder bacteria from healthy and infected women - Klebsiella (klebsiella2598)
Nosocomial Klebsiella pneumoniae with a high mortality rate in Kathmandu, Nepal - Stenotrophomonas maltophilia (stenotrophomonas-maltophilia3248)
Hospital acquired Klebsiella pneumoniae and the role of colonization and transmission (Australia) - Helicobacter (helicobacter2629)
Helicobacter typhlonius genome sequencing - Aeromonas (aeromonas2359)
HPACC Murray project - Streptococcus pyogenes (streptococcus-pyogenes2393)
Streptococcus pyogenes infections among children admitted to Kilifi District Hospital - Escherichia (escherichia693)
ETEC wild types and attenuated vaccine strains - Streptococcus pneumoniae (streptococcus-pneumoniae3063)
Identifying pneumococcal genetic determinants for progression from colonisation to serious disease - Bacillus (bacillus1951)
Whole genome sequencing of naturally isolated Bacillus and Serratia strains that showed virulence to Caenorhabditis elegans - Streptococcus pneumoniae (streptococcus-pneumoniae2690)
Discovery of natural pneumococcal mutation rates during controlled colonisation of the human nasopharynx - Streptococcus pneumoniae (streptococcus-pneumoniae2852)
Genome sequence variation in a mouse model of invasive pneumococcal infection - Citrobacter freundii (citrobacter-freundii2119)
Relationship of MLST structure of Escherichia coli species to genomic organisation complexity - Shigella sonnei (shigella-sonnei2200)
Shigella CJ DB project - Peptoclostridium difficile (peptoclostridium-difficile2027)
Comparative RNA-seq analysis of three bacterial species - Burkholderia (burkholderia2359)
HPACC Murray project - Chlamydophila (chlamydophila2069)
Acinetobacter baumannii multiple antimicrobial resistance - Campylobacter (campylobacter3370)
PacBio sequencing study of Campylobacter jejuni DNA methylation - Blautia (blautia1765)
MetaHIT Genome Improvement - Escherichia coli (escherichia-coli2433)
Comparative analysis of the two pandemic CTX-M-15 ESBL-producing E. coli lineages ST131 and ST648 from various hosts - Mycobacterium (mycobacterium499)
Mycobacterium microti genome diversity - Serratia marcescens (serratia-marcescens2880)
Multi Drug Resistant Gram Negative Rods (MDR-GNR) sequencing study - Escherichia coli (escherichia-coli2198)
Whole genome sequencing of naturally isolated Escherichia coli from nursing homes in Ireland - Staphylococcus aureus (staphylococcus-aureus2342)
Antimicrobial resistance modifiers studied by TraDIS - Streptococcus (streptococcus1718)
Streptococcus pneumoniae evolution and population structure during longitudinal sampling in a defined human population - Streptococcus (streptococcus2088)
Streptococcus pyogenes isolates from Fiji - Parabacteroides (parabacteroides129)
Single Bacterial Cell Whole Genome Amplification - Mycobacterium (mycobacterium2656)
Global and local genomics of Mycobacterium ulcerans - Shigella (shigella628)
Shigella sonnei TraDIS - Serratia (serratia1951)
Whole genome sequencing of naturally isolated Bacillus and Serratia strains that showed virulence to Caenorhabditis elegans - Citrobacter rodentium (citrobacter-rodentium3387)
Sequencing Citrobacter rodentium small colony variants (SCV) - Burkholderia (burkholderia2727)
Sequencing Burkholderia gladioli BCC0238 - Haemophilus (haemophilus1690)
Haemophilus parasuis genome comparisons - Faecalibacterium (faecalibacterium1765)
MetaHIT Genome Improvement - Mycoplasma (mycoplasma692)
Mycoplasma and Chlamydia multiplex test - Salmonella (salmonella3078)
Sequencing of Salmonella Dublin isolates from 2006-2011 - Vibrio (vibrio3625)
Tucuman Variant of Vibrio cholerae - Mycobacterium (mycobacterium17)
Discovery of sequence diversity in Mycobacterium tuberculosis - Klebsiella pneumoniae (klebsiella-pneumoniae2512)
Molecular epidemiology of Klebsiella pneumoniae invasive isolates from Kilifi - Streptococcus pneumoniae (streptococcus-pneumoniae1747)
Whole genome sequencing of carried Streptococcus pneumoniae during the implementation of pneumococcal conjugate vaccines in the UK - Klebsiella (klebsiella2342)
Antimicrobial resistance modifiers studied by TraDIS - Staphylococcus aureus (staphylococcus-aureus1943)
Diversity of MRSA - Escherichia (escherichia3248)
Hospital acquired Klebsiella pneumoniae and the role of colonization and transmission (Australia) - Klebsiella pneumoniae (klebsiella-pneumoniae2598)
Nosocomial Klebsiella pneumoniae with a high mortality rate in Kathmandu, Nepal - Bordetella (bordetella1690)
Haemophilus parasuis genome comparisons - Salmonella (salmonella1702)
TraDIS of Salmonella Typhimurium subjected to serum killing - Salmonella (salmonella2234)
TraDIS; identification of antimicrobial resistance genes in Salmonella Typhimurium - Salmonella (salmonella3249)
Salmonella Typhi RNA study - Streptococcus (streptococcus2700)
Enterococci sequencing (BSAC collection) - Streptococcus (streptococcus2662)
Veterinary hospital MRSA infection study - Ruminococcus (ruminococcus2213)
Clostridium difficile 078 diversity - Staphylococcus aureus (staphylococcus-aureus2843)
Staphylococcus aureus (MRSA) study - Fructobacillus fructosus (fructobacillus-fructosus2233)
Lactobacillus in severe early childhood caries - Paenibacillus (paenibacillus2513)
Unraveling genetic diversity and plasticity within the honey bee pathogenic bacterial species Paenibacillus larvae - Mycobacterium (mycobacterium3565)
Determining the methylome of Mycobacterium tuberculosis - Escherichia (escherichia3454)
Genomic characterization of bladder bacteria from healthy and infected women - Escherichia (escherichia2725)
Pathogenesis of Escherichia coli prostatitis and oncogenesis - Mycobacterium (mycobacterium1748)
Evolution of drug resistance in Mycobacterium tuberculosis - Streptococcus (streptococcus3677)
PacBio sequencing of Streptococcus equi 4592 - Eubacterium (eubacterium1765)
MetaHIT Genome Improvement - Klebsiella (klebsiella1943)
Diversity of MRSA - Lactobacillus (lactobacillus1921)
MetaHIT_KT01 - Dialister (dialister3454)
Genomic characterization of bladder bacteria from healthy and infected women - Peptoclostridium difficile (peptoclostridium-difficile2696)
TraDIS study on Clostridium difficile - Bacteroides (bacteroides129)
Single Bacterial Cell Whole Genome Amplification - Salmonella (salmonella613)
Salmonella Typhimurium DT104 isolates - Salmonella (salmonella451)
Salmonella TraDIS - Enterococcus (enterococcus3379)
Sequencing vancomycin-resistant and sensitive Enterococci (VRE/VRS) (HICF) - Staphylococcus (staphylococcus2661)
Staphylococcus aureus ST239 diversity in Thailand - Citrobacter rodentium (citrobacter-rodentium2561)
TraDIS Citrobacter rodentium - Chlamydia (chlamydia641)
Chlamydia trachomatis pilot - Turicibacter sanguinis (turicibacter-sanguinis2213)
Clostridium difficile 078 diversity - Streptococcus (streptococcus2795)
Streptococcus pyogenes group A sequencing - Citrobacter rodentium (citrobacter-rodentium310)
Citrobacter rodentium genome assembly - Staphylococcus (staphylococcus2588)
Staphylococcus aureus global survey - Aerococcus (aerococcus3454)
Genomic characterization of bladder bacteria from healthy and infected women - Escherichia coli (escherichia-coli2434)
Defining hidden traits of successful pathogenic E. coli lineages in Sequence type 10 strains - Peptoclostridium difficile (peptoclostridium-difficile226)
Microevolution of hypervirulent clade and ribotype 027 Clostridium difficile isolates - Streptococcus pneumoniae (streptococcus-pneumoniae2862)
Indel detection in stressed pneumococci - Klebsiella pneumoniae (klebsiella-pneumoniae2342)
Antimicrobial resistance modifiers studied by TraDIS - Streptococcus (streptococcus2842)
Integration of the host and pathogen genetics in bacterial meningitis - Burkholderia (burkholderia2604)
Burkholderia pseudomallei – case-control study - Escherichia (escherichia1690)
Haemophilus parasuis genome comparisons - Vibrio cholerae (vibrio-cholerae3625)
Tucuman Variant of Vibrio cholerae - Staphylococcus aureus (staphylococcus-aureus2985)
TraDIS method optimisation and validation - Campylobacter (campylobacter3542)
Global population genomics of Campylobacter fetus - Escherichia coli (escherichia-coli2084)
Atypical enteropathogenic E. coli virulence markers - Escherichia coli (escherichia-coli2961)
Escherichia coli (ETEC) samples from KEMRI - Mycobacterium (mycobacterium3630)
PacBio sequencing of Mycobacterium abscessus strains - Streptococcus pneumoniae (streptococcus-pneumoniae1945)
Streptococcus pneumoniae samples from Malawi - Chlamydophila abortus (chlamydophila-abortus1994)
European-wide survey of Chlamydophila abortus - Chlamydia trachomatis (chlamydia-trachomatis2182)
Chlamydia trachomatis Sure Select V1 - Klebsiella pneumoniae (klebsiella-pneumoniae1943)
Diversity of MRSA - Mycobacterium (mycobacterium2469)
Effect of HIV co-infection on the population genomics of Mycobacterium tuberculosis in Sub-Saharan Africa - Klebsiella (klebsiella3555)
VRES-water - Brachyspira (brachyspira1765)
MetaHIT Genome Improvement - Streptococcus (streptococcus517)
Pneumococcal in morbus diversity (QEH, Blantyre, Malawi) - Klebsiella (klebsiella2985)
TraDIS method optimisation and validation - Weissella (weissella2233)
Lactobacillus in severe early childhood caries - Rothia (rothia3454)
Genomic characterization of bladder bacteria from healthy and infected women - Pseudomonas (pseudomonas3631)
Lung Culturomics - Salmonella (salmonella2359)
HPACC Murray project - Staphylococcus (staphylococcus2170)
Staphylococcus aureus (EOE) study - Staphylococcus (staphylococcus2097)
MRSA library sequencing - Acinetobacter (acinetobacter2952)
Whole genome sequencing of colistin resistant Klebsiella and Acinetobacter - Burkholderia (burkholderia2460)
Burkholderia pseudomallei MLST determination - Mycobacterium (mycobacterium2837)
Genomics of Mycobacterium africanum on the global and local scale - Streptococcus dysgalactiae (streptococcus-dysgalactiae655)
Streptococcus pyogenes genome architecture - Enterobacter (enterobacter3248)
Hospital acquired Klebsiella pneumoniae and the role of colonization and transmission (Australia) - Staphylococcus (staphylococcus705)
Major lineages of healthcare-associated methicillin-resistant Staphylococcus aureus in Singapore - Staphylococcus (staphylococcus508)
Staphylococcus aureus ST239 diversity - Peptoclostridium (peptoclostridium129)
Single Bacterial Cell Whole Genome Amplification - Salmonella (salmonella3135)
Sequencing Nigerian Salmonella Typhi samples - Streptococcus dysgalactiae (streptococcus-dysgalactiae3095)
PacBio sequencing of Streptococcus spp. - Prevotella (prevotella129)
Single Bacterial Cell Whole Genome Amplification - Escherichia coli (escherichia-coli2067)
CF negative Enterotoxigenic Escherichia coli - Streptococcus suis (streptococcus-suis607)
Identification of Streptococcus suis genes required for infection of pig nasal septum IVOC using TraDIS - Escherichia coli (escherichia-coli3638)
WGS on UPEC strains for colicin study - Salmonella (salmonella2689)
Salmonella enterica ser. Typhimurium in Argentina - Streptococcus (streptococcus1943)
Diversity of MRSA - Escherichia (escherichia3305)
Sequencing bacterial genomes - Escherichia (escherichia2090)
Global diversity of Shigella species - Staphylococcus (staphylococcus2662)
Veterinary hospital MRSA infection study - Salmonella (salmonella255)
Salmonella Virchow genome assembly - Mycobacterium (mycobacterium1793)
Survival and growth of Mycobacterium tuberculosis (TraDIS) - Chlamydia (chlamydia445)
Chlamydial genome assembly - Blautia (blautia2213)
Clostridium difficile 078 diversity - Shigella (shigella297)
Discovery of sequence diversity in Shigella sp. - Chlamydia trachomatis (chlamydia-trachomatis3539)
Chlamydia trachomatis genomic heterogeneity - Shigella (shigella2200)
Shigella CJ DB project - Enterobacter (enterobacter3454)
Genomic characterization of bladder bacteria from healthy and infected women - Peptoclostridium (peptoclostridium532)
Clostridium difficile ribotype 027 project - Shigella sonnei (shigella-sonnei2485)
A local dissection of the longitudinal trends in the genetic diversity and antimicrobial resistance amongst Klebsiella pneumoniae and Enterobacter sp. - Streptococcus (streptococcus2004)
Impact of HIV on nasopharyngeal carriage of Streptococcus pneumoniae - Streptococcus pyogenes (streptococcus-pyogenes1872)
Genome diversity of spatially distinct Streptococcus agalactiae - Mycoplasma (mycoplasma2028)
Mycoplasma hyopneumoniae genome comparisons - Vibrio (vibrio2689)
Salmonella enterica ser. Typhimurium in Argentina - Staphylococcus aureus (staphylococcus-aureus2309)
Staphylococcus aureus (MPROS) study - Citrobacter (citrobacter3387)
Sequencing Citrobacter rodentium small colony variants (SCV) - Gemella (gemella3454)
Genomic characterization of bladder bacteria from healthy and infected women - Chlamydophila abortus (chlamydophila-abortus641)
Chlamydia trachomatis pilot - Klebsiella pneumoniae (klebsiella-pneumoniae3555)
VRES-water - Staphylococcus aureus (staphylococcus-aureus3197)
Staphylococcus aureus samples from PHE collection - Klebsiella pneumoniae (klebsiella-pneumoniae2985)
TraDIS method optimisation and validation - Shigella sonnei (shigella-sonnei2853)
Contemporary outbreaks of shigellosis at European arts festivals - Salmonella (salmonella2065)
ChIP-seq Salmonella - Clostridium (clostridium2082)
Generation of draft genomes for supershedder and bacteriotherapy bacteria - Salmonella (salmonella1819)
MICROME single carbon source testing by TraDIS - Salmonella (salmonella2189)
TraDIS on Salmonella carbon source - Streptococcus (streptococcus3063)
Identifying pneumococcal genetic determinants for progression from colonisation to serious disease - Citrobacter (citrobacter3631)
Lung Culturomics - Olsenella uli (olsenella-uli2233)
Lactobacillus in severe early childhood caries - Salmonella (salmonella1978)
Whole genome sequencing of Non-Typhoidal Salmonella Typhimurium and Enteritidis isolates - Streptococcus pyogenes (streptococcus-pyogenes2699)
100 Year Genomic Evolution of M1 strains of Streptococcus pyogenes - Streptococcus (streptococcus2690)
Discovery of natural pneumococcal mutation rates during controlled colonisation of the human nasopharynx - Streptococcus (streptococcus2852)
Genome sequence variation in a mouse model of invasive pneumococcal infection - Staphylococcus (staphylococcus1719)
Staphylococcus aureus (MRSA) transmission in a London hospital - Bacillus (bacillus2789)
Whole genome sequencing of 1200 bacterial strains isolated from healthy faecal transplant donors and recurrent C. difficile patients - Escherichia (escherichia2359)
HPACC Murray project - Clostridium sordellii (clostridium-sordellii2304)
Neglected Clostridial pathogens - Peptoclostridium (peptoclostridium1669)
Clostridium difficile ribotype 027 resequencing II - Salmonella (salmonella3003)
Genomic study of Salmonella Typhi - Salmonella (salmonella2433)
Comparative analysis of the two pandemic CTX-M-15 ESBL-producing E. coli lineages ST131 and ST648 from various hosts - Trueperella (trueperella3454)
Genomic characterization of bladder bacteria from healthy and infected women - Chlamydophila (chlamydophila162)
Chlamydia trachomatis global diversity project - Chlamydia (chlamydia2182)
Chlamydia trachomatis Sure Select V1 - Shigella (shigella1934)
Transcriptome analysis of Shigella flexneri M90T wild type strain and its fnr mutant in response to anaerobiosis - Leptospira interrogans (leptospira-interrogans358)
Discovery of sequence diversity in Leptospira interrogans ST34 - Streptococcus pneumoniae (streptococcus-pneumoniae2363)
Streptococcus pneumoniae genetic diversity and invasive pneumococcal disease - Eubacterium (eubacterium2213)
Clostridium difficile 078 diversity - Salmonella (salmonella444)
Salmonella enterica subspecies assembly - Staphylococcus aureus (staphylococcus-aureus2683)
Staphylococcus aureus genome sequencing study - Staphylococcus aureus (staphylococcus-aureus3377)
Sequencing MRSA samples (HICF) - Enterococcus (enterococcus3454)
Genomic characterization of bladder bacteria from healthy and infected women - Staphylococcus (staphylococcus2342)
Antimicrobial resistance modifiers studied by TraDIS - Citrobacter (citrobacter2561)
TraDIS Citrobacter rodentium - Streptococcus (streptococcus1747)
Whole genome sequencing of carried Streptococcus pneumoniae during the implementation of pneumococcal conjugate vaccines in the UK - Raoultella (raoultella3248)
Hospital acquired Klebsiella pneumoniae and the role of colonization and transmission (Australia) - Proteus mirabilis (proteus-mirabilis3414)
Pacbio sequencing of KPC Proteus mirabilis - Escherichia (escherichia3627)
Study of novel antibiotic targets - Klebsiella (klebsiella2880)
Multi Drug Resistant Gram Negative Rods (MDR-GNR) sequencing study - Haemophilus (haemophilus1722)
Illumina sequencing of the Finnish otitis media non-typable Haemophilus influenzae strains - Klebsiella (klebsiella2486)
Investigation of carbapenem resistant Klebsiella pneumoniae isolates associated with nosocomial epidemics in Spain. - Flavonifractor plautii (flavonifractor-plautii2213)
Clostridium difficile 078 diversity - Staphylococcus aureus (staphylococcus-aureus360)
Discovery of sequence diversity in Staphylococcus aureus ST22 (global collection) - Neisseria (neisseria3416)
Extended genomic epidemiology of Neisseria gonorrhoeae with reduced susceptibility to extended spectrum cephalosporins and azithromycin in the US - Morganella morganii (morganella-morganii3380)
Sequencing Gram negative bacteria (HICF) - Vibrio cholerae (vibrio-cholerae2689)
Salmonella enterica ser. Typhimurium in Argentina - Yersinia (yersinia221)
Yersinia enterocolitica diversity (biotypes) - Streptococcus pneumoniae (streptococcus-pneumoniae3631)
Lung Culturomics - Staphylococcus aureus (staphylococcus-aureus2221)
Population structure of a very early branching Staphylococcus aureus lineage - Pseudomonas (pseudomonas3256)
TraDIS to study T6SS in Pseudomonas aeruginosa - Salmonella (salmonella106)
Salmonella enterica strain C5507 - Chlamydia (chlamydia3539)
Chlamydia trachomatis genomic heterogeneity - Staphylococcus (staphylococcus1943)
Diversity of MRSA - Salmonella (salmonella427)
Salmonella Paratyphi B & Java genome assembly - Acinetobacter (acinetobacter3665)
TraDIS to study biofilms in Acinetobacter - Chlamydophila abortus (chlamydophila-abortus445)
Chlamydial genome assembly - Enterobacter (enterobacter3305)
Sequencing bacterial genomes - Serratia (serratia2880)
Multi Drug Resistant Gram Negative Rods (MDR-GNR) sequencing study - Salmonella (salmonella2301)
Multi-country outbreak of Salmonella Newport infection, December 2011 - Peptoclostridium (peptoclostridium380)
Genetic variation in recurrent infection with Clostridium difficile 027 - Peptoclostridium difficile (peptoclostridium-difficile2951)
Clostridium difficile contaminating strains - Escherichia coli (escherichia-coli3533)
Bloodstream surveillence across Africas - Salmonella (salmonella2387)
A genome-wide approach to understand the interplay between bacterial virulence genes and host immune responses - Enterococcus (enterococcus1690)
Haemophilus parasuis genome comparisons - Staphylococcus aureus (staphylococcus-aureus2033)
Staphylococcus aureus (MSSA) study - Streptococcus dysgalactiae (streptococcus-dysgalactiae1977)
Genome diversity in Streptococcus dysgalactiae subspecies equisimilis - Escherichia (escherichia2433)
Comparative analysis of the two pandemic CTX-M-15 ESBL-producing E. coli lineages ST131 and ST648 from various hosts - Staphylococcus (staphylococcus2843)
Staphylococcus aureus (MRSA) study - Legionella (legionella2531)
Evaluation of whole genome sequencing for the epidemiological typing of Legionella pneumophila - Streptococcus pneumoniae (streptococcus-pneumoniae270)
Genetic diversity on Streptococcus pneumoniae in Malawi 1 - Streptococcus equi (streptococcus-equi3677)
PacBio sequencing of Streptococcus equi 4592 - Staphylococcus aureus (staphylococcus-aureus1981)
Diversity of MRSA II - Escherichia (escherichia2198)
Whole genome sequencing of naturally isolated Escherichia coli from nursing homes in Ireland - Corynebacterium diphtheriae (corynebacterium-diphtheriae3156)
PacBio sequencing of Corynebacterium diphtheriae - Proteus mirabilis (proteus-mirabilis2789)
Whole genome sequencing of 1200 bacterial strains isolated from healthy faecal transplant donors and recurrent C. difficile patients - Escherichia coli (escherichia-coli2133)
Defining EPEC: evolution, global distribution and effector inventory - Streptococcus uberis (streptococcus-uberis1943)
Diversity of MRSA - Salmonella (salmonella2790)
Evaluation of genetic and phenotypic diversity in serovar of non-typhoidal Salmonella enterica circulating in Uruguay - Escherichia coli (escherichia-coli3380)
Sequencing Gram negative bacteria (HICF) - Escherichia coli (escherichia-coli3542)
Global population genomics of Campylobacter fetus - Salmonella (salmonella2755)
Survival of Salmonella enterica serotype Typhi in the water microcosm: transcriptome response - Mycobacterium (mycobacterium2232)
Genomic diversity in Mycobacterium bovis associated with cows and badgers - Salmonella (salmonella321)
Salmonella Hadar & Infantis pooled isolates - Alistipes (alistipes1765)
MetaHIT Genome Improvement - Streptococcus (streptococcus2862)
Indel detection in stressed pneumococci - Klebsiella pneumoniae (klebsiella-pneumoniae2880)
Multi Drug Resistant Gram Negative Rods (MDR-GNR) sequencing study - Klebsiella pneumoniae (klebsiella-pneumoniae2486)
Investigation of carbapenem resistant Klebsiella pneumoniae isolates associated with nosocomial epidemics in Spain. - Prevotella (prevotella1921)
MetaHIT_KT01 - Enterobacter (enterobacter2359)
HPACC Murray project - Alloscardovia (alloscardovia3454)
Genomic characterization of bladder bacteria from healthy and infected women - Serratia (serratia460)
Serratia transcriptomics - Serratia marcescens (serratia-marcescens3248)
Hospital acquired Klebsiella pneumoniae and the role of colonization and transmission (Australia) - Pseudomonas (pseudomonas3248)
Hospital acquired Klebsiella pneumoniae and the role of colonization and transmission (Australia) - Staphylococcus aureus (staphylococcus-aureus2731)
TraDIS to study novel antibiotic targets - Streptococcus (streptococcus1945)
Streptococcus pneumoniae samples from Malawi - Salmonella (salmonella651)
Salmonella Typhi and Salmonella Paratyphi A Strains - Citrobacter (citrobacter310)
Citrobacter rodentium genome assembly - Staphylococcus (staphylococcus2985)
TraDIS method optimisation and validation - Corynebacterium (corynebacterium196)
Discovery of sequence diversity in Corynebacterium diphtheriae - Staphylococcus aureus (staphylococcus-aureus361)
Discovery of sequence diversity in Staphylococcus aureus ST398 - Streptococcus suis (streptococcus-suis2904)
Streptococcus suis in the pig meat supply chain - Hafnia alvei (hafnia-alvei2119)
Relationship of MLST structure of Escherichia coli species to genomic organisation complexity - Aeromonas (aeromonas3533)
Bloodstream surveillence across Africas - Shigella (shigella2485)
A local dissection of the longitudinal trends in the genetic diversity and antimicrobial resistance amongst Klebsiella pneumoniae and Enterobacter sp. - Pseudomonas (pseudomonas3454)
Genomic characterization of bladder bacteria from healthy and infected women - Staphylococcus aureus (staphylococcus-aureus2025)
MRSA sequencing test - Escherichia coli (escherichia-coli1867)
Global phylogeny of enterotoxigenic Escherichia coli collection - Escherichia coli (escherichia-coli3487)
AMR Enterobacteriaceae in Blantyre - Staphylococcus aureus (staphylococcus-aureus3631)
Lung Culturomics - Cronobacter (cronobacter2880)
Multi Drug Resistant Gram Negative Rods (MDR-GNR) sequencing study - Klebsiella (klebsiella2731)
TraDIS to study novel antibiotic targets - Peptoclostridium (peptoclostridium3552)
VRECD-water - Mycobacterium (mycobacterium302)
Mycobacterium tuberculosis from archeological samples - Bordetella (bordetella2093)
Bordetella genome survey - Mycobacterium (mycobacterium229)
Discovery of sequence diversity in Mycobacterium tuberculosis (Russia collection) - Anaerostipes (anaerostipes2213)
Clostridium difficile 078 diversity - Shigella (shigella2853)
Contemporary outbreaks of shigellosis at European arts festivals - Escherichia coli (escherichia-coli3534)
Pathogenic lineages of enteric bacteria in Nigeria - Salmonella (salmonella1856)
Atypical Salmonella Enteritidis persistent infection - Peptoclostridium difficile (peptoclostridium-difficile632)
Clostridium difficile ribotype 027 resequencing - Mycobacterium (mycobacterium56)
Mycobacterium canetti genome assembly - Blautia producta (blautia-producta1707)
Blautia producta genome comparisons - Mycobacterium (mycobacterium3274)
The interaction between the host and pathogen genetics in susceptibility to pulmonary tuberculosis - Escherichia (escherichia2434)
Defining hidden traits of successful pathogenic E. coli lineages in Sequence type 10 strains - Acinetobacter (acinetobacter2069)
Acinetobacter baumannii multiple antimicrobial resistance - Klebsiella (klebsiella3631)
Lung Culturomics - Legionella (legionella2532)
Characterisation of some of the major disease-associated clones of L.pneumophila to investigate their enhanced potential to cause human disease - Bacteroides (bacteroides1921)
MetaHIT_KT01 - Salmonella (salmonella3326)
A molecular epidemiology study of the occurrence and control of Salmonella in duck breeding and production - Burkholderia (burkholderia265)
Discovery of sequence diversity in Burkholderia pseudomallei infection - Bordetella (bordetella336)
Bordetella bronchiseptica complex IV Genome Sequencing - Peptoclostridium difficile (peptoclostridium-difficile247)
The genome sequence for Clostridium difficile strain R20291 - Citrobacter (citrobacter3248)
Hospital acquired Klebsiella pneumoniae and the role of colonization and transmission (Australia) - Escherichia (escherichia2084)
Atypical enteropathogenic E. coli virulence markers - Staphylococcus aureus (staphylococcus-aureus2329)
Staphylococcus aureus lineages from the Indian subcontinent: emergence and global transmission - Serratia (serratia3631)
Lung Culturomics - Escherichia (escherichia2961)
Escherichia coli (ETEC) samples from KEMRI - Lactonifactor longoviformis (lactonifactor-longoviformis2213)
Clostridium difficile 078 diversity - Bordetella (bordetella2756)
Sequencing Czech Bordetella pertussis wP vaccine strains - Chlamydia trachomatis (chlamydia-trachomatis641)
Chlamydia trachomatis pilot - Salmonella (salmonella2409)
Whole genome sequencing based analysis of blood stream invasive Nontyphoidal Salmonellae from Sub Saharan Africa - Enterococcus (enterococcus2082)
Generation of draft genomes for supershedder and bacteriotherapy bacteria - Escherichia coli (escherichia-coli3390)
Sequencing RNA samples from ETEC strains - Salmonella (salmonella2927)
Phylogeography of Shigella spp. in Southeast Asia - Mycobacterium (mycobacterium2045)
Relapse and Reinfection in Tuberculosis - Staphylococcus (staphylococcus2309)
Staphylococcus aureus (MPROS) study - Shigella dysenteriae (shigella-dysenteriae3426)
Evolution and adaptation of the epidemic dysentery bacterium Shigella dysenteriae type 1 (Shiga�s bacillus) during the pre and post-antibiotic era - Klebsiella pneumoniae (klebsiella-pneumoniae2731)
TraDIS to study novel antibiotic targets - Leptospira (leptospira358)
Discovery of sequence diversity in Leptospira interrogans ST34 - Staphylococcus aureus (staphylococcus-aureus3264)
Staphylococcus aureus small colony variants sequencing study - Streptococcus (streptococcus1946)
Genomic and transcriptomic characterisation of Streptococcus pyogenes emm12 strains from the 2011 Hong Kong scarlet fever outbreak - Chlamydia (chlamydia162)
Chlamydia trachomatis global diversity project - Staphylococcus (staphylococcus3197)
Staphylococcus aureus samples from PHE collection - Raoultella (raoultella2359)
HPACC Murray project - Streptococcus suis (streptococcus-suis1690)
Haemophilus parasuis genome comparisons - Enterococcus (enterococcus1721)
Whole genome sequencing of routine samples supplied by the diagnostic lab at Addenbrooke’s Hospital - Peptoclostridium difficile (peptoclostridium-difficile462)
Clostridium difficile Ribotype Reference Genome Project - Streptococcus (streptococcus2363)
Streptococcus pneumoniae genetic diversity and invasive pneumococcal disease - Neisseria (neisseria528)
Genome sequencing of Neisseria gonorrhoeae isolates - Klebsiella pneumoniae (klebsiella-pneumoniae3631)
Lung Culturomics - Escherichia (escherichia2067)
CF negative Enterotoxigenic Escherichia coli - Escherichia (escherichia3638)
WGS on UPEC strains for colicin study - Salmonella (salmonella2303)
Genomic and immunological characterization of clinical isolates of non-typhoidal Salmonella from Kenya - Stenotrophomonas (stenotrophomonas3248)
Hospital acquired Klebsiella pneumoniae and the role of colonization and transmission (Australia) - Streptococcus pyogenes (streptococcus-pyogenes1760)
Streptococcus pyogenes (GAS strains) diversity - Escherichia coli (escherichia-coli3338)
TraDIS to study Escherichia coli PHE isolates - Proteus (proteus3414)
Pacbio sequencing of KPC Proteus mirabilis - Roseburia (roseburia1765)
MetaHIT Genome Improvement - Yersinia (yersinia518)
Yersinia enterocolitica Nottingham - Peptoniphilus (peptoniphilus3454)
Genomic characterization of bladder bacteria from healthy and infected women - Mycobacterium (mycobacterium3275)
Population genomics of Mycobacterium abscessus Brazilian epidemic - Staphylococcus (staphylococcus2683)
Staphylococcus aureus genome sequencing study - Staphylococcus (staphylococcus3377)
Sequencing MRSA samples (HICF) - Streptococcus (streptococcus270)
Genetic diversity on Streptococcus pneumoniae in Malawi 1 - Salmonella (salmonella1707)
Blautia producta genome comparisons - Campylobacter (campylobacter2826)
i-CAMPS 3 – Prevalence of Campylobacter in the Grampian region of Scotland - Atopobium (atopobium2233)
Lactobacillus in severe early childhood caries - Clostridium (clostridium1921)
MetaHIT_KT01 - Streptococcus (streptococcus3631)
Lung Culturomics - Streptococcus pneumoniae (streptococcus-pneumoniae3454)
Genomic characterization of bladder bacteria from healthy and infected women - Bordetella (bordetella299)
Bordetella diversity project - Streptococcus (streptococcus244)
Discovery of sequence diversity in Streptococcus suis (Vietnam) - Mycobacterium (mycobacterium480)
Discovery of sequence diversity in Mycobacterium tuberculosis (key strains) - Chlamydia trachomatis (chlamydia-trachomatis445)
Chlamydial genome assembly - Salmonella (salmonella3533)
Bloodstream surveillence across Africas - Salmonella (salmonella2607)
Phylogenomic analysis of blood and stool isolates of Non-typhoidal Salmonella from urban and rural sites in Kenya - Streptococcus pneumoniae (streptococcus-pneumoniae3501)
Streptococcus pneumoniae from the pre-PCV7, PCV7 and PCV13 eras - Staphylococcus (staphylococcus2221)
Population structure of a very early branching Staphylococcus aureus lineage - Escherichia coli (escherichia-coli3553)
VREC-water - Campylobacter (campylobacter264)
Discovery of sequence diversity in Campylobacter spp. - Mycobacterium (mycobacterium3455)
Sequence analysis of Mycobacterium tuberculosis - Citrobacter freundii (citrobacter-freundii3248)
Hospital acquired Klebsiella pneumoniae and the role of colonization and transmission (Australia) - Burkholderia (burkholderia3723)
PacBio sequencing of Burkholderia ambifaria - Proteus (proteus2789)
Whole genome sequencing of 1200 bacterial strains isolated from healthy faecal transplant donors and recurrent C. difficile patients - Mycobacterium (mycobacterium2688)
Isoniazid-resistant TB outbreak investigation - Salmonella (salmonella2133)
Defining EPEC: evolution, global distribution and effector inventory - Neisseria (neisseria3454)
Genomic characterization of bladder bacteria from healthy and infected women - Staphylococcus (staphylococcus2033)
Staphylococcus aureus (MSSA) study - Peptoclostridium (peptoclostridium498)
Clostridium difficile ribotype 017 study - Butyrivibrio (butyrivibrio1765)
MetaHIT Genome Improvement - Salmonella (salmonella306)
Group C Salmonella diversity - Streptococcus (streptococcus2329)
Staphylococcus aureus lineages from the Indian subcontinent: emergence and global transmission - Peptoclostridium (peptoclostridium2342)
Antimicrobial resistance modifiers studied by TraDIS - Staphylococcus aureus (staphylococcus-aureus1851)
Evolution of MRSA in a single institution over a 12 year period - Chlamydophila abortus (chlamydophila-abortus162)
Chlamydia trachomatis global diversity project - Staphylococcus (staphylococcus1981)
Diversity of MRSA II - Escherichia coli (escherichia-coli3412)
Escherichia coli sequencing - Peptoclostridium difficile (peptoclostridium-difficile1669)
Clostridium difficile ribotype 027 resequencing II - Neisseria (neisseria3587)
Molecular epidemiology and microbial ecology of Neisseria gonorrhoeae in Singapore - Peptoclostridium difficile (peptoclostridium-difficile116)
Discovery of sequence diversity in Clostridium difficile serogroup 027 (pooled without indexing) - Corynebacterium (corynebacterium3454)
Genomic characterization of bladder bacteria from healthy and infected women - Streptococcus pneumoniae (streptococcus-pneumoniae2590)
Microevolution of Neisseria meningitidis during clonal waves of colonization and disease – phase 2 - Staphylococcus aureus (staphylococcus-aureus2036)
Staphylococcus aureus (BSAC) study - Yersinia (yersinia519)
Yersinia Genus project - Salmonella (salmonella2510)
Determination of microevolution of S. typhi during infection: a human volunteer study - Salmonella (salmonella3204)
Investigation of temporo-spatial and carriage-invasion relationships between isolates of Salmonella Typhimurium from a well described paediatric cohort in Malawi - Staphylococcus aureus (staphylococcus-aureus705)
Major lineages of healthcare-associated methicillin-resistant Staphylococcus aureus in Singapore - Staphylococcus aureus (staphylococcus-aureus508)
Staphylococcus aureus ST239 diversity - Salmonella (salmonella66)
Salmonella Paratyphi A diversity (East India) - Escherichia coli (escherichia-coli3027)
Pacbio sequencing for TraDIS reference genomes - Staphylococcus (staphylococcus2213)
Clostridium difficile 078 diversity - Peptoclostridium difficile (peptoclostridium-difficile481)
Clostridium difficile ribotype 078 resequencing - Corynebacterium diphtheriae (corynebacterium-diphtheriae196)
Discovery of sequence diversity in Corynebacterium diphtheriae - Staphylococcus (staphylococcus2731)
TraDIS to study novel antibiotic targets - Staphylococcus aureus (staphylococcus-aureus3454)
Genomic characterization of bladder bacteria from healthy and infected women - Escherichia (escherichia3533)
Bloodstream surveillence across Africas - Klebsiella (klebsiella3248)
Hospital acquired Klebsiella pneumoniae and the role of colonization and transmission (Australia) - Mycoplasma (mycoplasma3494)
Chest Array: Direct sequencing of selected bacterial strains from clinical samples - Blautia (blautia2082)
Generation of draft genomes for supershedder and bacteriotherapy bacteria - Staphylococcus (staphylococcus262)
Discovery of sequence diversity in Staphylococcus aureus ST22 and ST36 - Neisseria (neisseria2590)
Microevolution of Neisseria meningitidis during clonal waves of colonization and disease – phase 2 - Escherichia coli (escherichia-coli2342)
Antimicrobial resistance modifiers studied by TraDIS - Clostridium (clostridium2304)
Neglected Clostridial pathogens - Klebsiella pneumoniae (klebsiella-pneumoniae478)
Klebsiella pneumoniae diversity - Escherichia (escherichia576)
Retrospective 0157:H7 TraDIS from screen in calves - Brucella (brucella3355)
Characterization of gene regulatory networks in Brucella abortus - Staphylococcus (staphylococcus2025)
MRSA sequencing test - Chlamydophila abortus (chlamydophila-abortus2069)
Acinetobacter baumannii multiple antimicrobial resistance - Campylobacter jejuni (campylobacter-jejuni2310)
Determination of spirality factors in Campylobacter jejuni - Clostridiales (clostridiales1921)
MetaHIT_KT01 - Staphylococcus (staphylococcus3631)
Lung Culturomics - Escherichia (escherichia2133)
Defining EPEC: evolution, global distribution and effector inventory - Staphylococcus aureus (staphylococcus-aureus2734)
Staphylococcus aureus (erythromycin resistant strains) study - Escherichia (escherichia3380)
Sequencing Gram negative bacteria (HICF) - Escherichia (escherichia3542)
Global population genomics of Campylobacter fetus - Klebsiella (klebsiella3454)
Genomic characterization of bladder bacteria from healthy and infected women - Fusobacterium (fusobacterium3454)
Genomic characterization of bladder bacteria from healthy and infected women - Streptococcus pneumoniae (streptococcus-pneumoniae615)
Streptococcus pneumoniae evolution - Serratia (serratia3248)
Hospital acquired Klebsiella pneumoniae and the role of colonization and transmission (Australia) - Campylobacter coli (campylobacter-coli264)
Discovery of sequence diversity in Campylobacter spp. - Salmonella (salmonella2096)
Genomic sequencing of Salmonella Java and Paratyphi B - Escherichia coli (escherichia-coli2119)
Relationship of MLST structure of Escherichia coli species to genomic organisation complexity - Streptococcus pyogenes (streptococcus-pyogenes2088)
Streptococcus pyogenes isolates from Fiji - Campylobacter (campylobacter312)
Campylobacter jejuni HPC5 (pseudolysogen) genome assembly - Escherichia coli (escherichia-coli1943)
Diversity of MRSA - Kocuria (kocuria3454)
Genomic characterization of bladder bacteria from healthy and infected women - Enterorhabdus mucosicola (enterorhabdus-mucosicola2082)
Generation of draft genomes for supershedder and bacteriotherapy bacteria - Acinetobacter (acinetobacter3027)
Pacbio sequencing for TraDIS reference genomes - Salmonella (salmonella504)
Phylogeography of Salmonella Typhimurium - Pluralibacter gergoviae (pluralibacter-gergoviae2880)
Multi Drug Resistant Gram Negative Rods (MDR-GNR) sequencing study - Escherichia coli (escherichia-coli2796)
Escherichia coli (PHE & BSAC collections) sequencing - Streptococcus (streptococcus1957)
Evolution and transmission of Streptococcus zooepidemicus ST-209 during the 2010 outbreak of respiratory disease in Icelandic horses - Streptococcus (streptococcus263)
Discovery of sequence diversity in Streptococcus equi - Neisseria (neisseria2611)
Neisseria meningitidis causing invasive disease in South Africa, 2003-2012 - Escherichia coli (escherichia-coli487)
E. coli MiniTn5 sequencing - Roseburia (roseburia2213)
Clostridium difficile 078 diversity - Shigella (shigella3426)
Evolution and adaptation of the epidemic dysentery bacterium Shigella dysenteriae type 1 (Shiga�s bacillus) during the pre and post-antibiotic era - Streptococcus pneumoniae (streptococcus-pneumoniae1703)
Streptococcus pneumoniae evolution and population structure during longitudinal sampling in a defined human population - Acinetobacter (acinetobacter2342)
Antimicrobial resistance modifiers studied by TraDIS - Helicobacter (helicobacter344)
Helicobacter genus diversity - Kluyvera (kluyvera3380)
Sequencing Gram negative bacteria (HICF) - Salmonella (salmonella316)
Salmonella typhimurium (tropical isolates) - Staphylococcus (staphylococcus2329)
Staphylococcus aureus lineages from the Indian subcontinent: emergence and global transmission - Klebsiella pneumoniae (klebsiella-pneumoniae3248)
Hospital acquired Klebsiella pneumoniae and the role of colonization and transmission (Australia) - Escherichia (escherichia1867)
Global phylogeny of enterotoxigenic Escherichia coli collection - Escherichia (escherichia3487)
AMR Enterobacteriaceae in Blantyre - Escherichia coli (escherichia-coli693)
ETEC wild types and attenuated vaccine strains - Actinomyces (actinomyces3454)
Genomic characterization of bladder bacteria from healthy and infected women - Salmonella (salmonella2511)
Phylogenomic analysis of blood and stool isolates of Salmonella Weltevreden from Vietnam - Mycobacterium (mycobacterium276)
Discovery of sequence diversity in Mycobacterium bovis - Shigella sonnei (shigella-sonnei1817)
Temporal & geographical Shigella genus diversity in Southern Vietnam 1994-2011 - Salmonella (salmonella67)
Salmonella Paratyphi A diversity (North India) - Streptococcus suis (streptococcus-suis3098)
Streptococcus suis in the pig meat supply chain - Salmonella (salmonella2276)
Hfq interactome and transciptome in Salmonella enterica serotypes - Brucella (brucella2815)
Genome sequence variation of Brucella isolated from wild and domesticated hosts - Streptococcus (streptococcus2027)
Comparative RNA-seq analysis of three bacterial species - Salmonella (salmonella3685)
PacBio sequencing for Salmonella surveillance study - Mycobacterium (mycobacterium1704)
Whole genome sequencing of Mycobacterium tuberculosis from a population in Malawi – transmission dynamics and associations with HIV - Streptococcus (streptococcus2904)
Streptococcus suis in the pig meat supply chain - Salmonella (salmonella522)
MDR invasive NTS Salmonella Typhimurium strains - Staphylococcus aureus (staphylococcus-aureus2208)
Staphylococcus aureus (CSARH & CSASH) study - Staphylococcus (staphylococcus3264)
Staphylococcus aureus small colony variants sequencing study - Klebsiella (klebsiella2234)
TraDIS; identification of antimicrobial resistance genes in Salmonella Typhimurium - Acinetobacter (acinetobacter1943)
Diversity of MRSA - Klebsiella pneumoniae (klebsiella-pneumoniae3454)
Genomic characterization of bladder bacteria from healthy and infected women - Mycobacterium (mycobacterium2754)
Illumina sequencing of multidrug resistant Mycobacterium tuberculosis (MTB) strains - Escherichia (escherichia3534)
Pathogenic lineages of enteric bacteria in Nigeria - Haemophilus (haemophilus3373)
Haemophilus ducreyi genome sequencing - Mycobacterium (mycobacterium644)
Mycobacterium tuberculosis pilot - Taylorella equigenitalis (taylorella-equigenitalis524)
Taylorella equigenitalis genome sequencing - Salmonella (salmonella1753)
TraDIS on tumour targeting Salmonella Typhimurium - Streptococcus (streptococcus2233)
Lactobacillus in severe early childhood caries - Escherichia coli (escherichia-coli3555)
VRES-water - Shigella dysenteriae (shigella-dysenteriae2090)
Global diversity of Shigella species - Streptococcus pyogenes (streptococcus-pyogenes2795)
Streptococcus pyogenes group A sequencing - Staphylococcus aureus (staphylococcus-aureus3305)
Sequencing bacterial genomes - Salmonella (salmonella531)
Monophasic Salmonella isolates - Shigella sonnei (shigella-sonnei628)
Shigella sonnei TraDIS - Peptoclostridium difficile (peptoclostridium-difficile618)
Clostridium difficile genomic stability - Escherichia coli (escherichia-coli2985)
TraDIS method optimisation and validation - Vibrio (vibrio352)
Investigating the diversity of Vibrio cholerae isolates - Proteus mirabilis (proteus-mirabilis3454)
Genomic characterization of bladder bacteria from healthy and infected women - Achromobacter (achromobacter3248)
Hospital acquired Klebsiella pneumoniae and the role of colonization and transmission (Australia) - Enterobacter (enterobacter3533)
Bloodstream surveillence across Africas - Streptococcus pneumoniae (streptococcus-pneumoniae616)
Streptococcus pneumoniae ST180 diversity - Neisseria (neisseria2209)
Emergence and spread of antibiotic resistant Neisseria gonorrhoeae in the US - Burkholderia pseudomallei (burkholderia-pseudomallei2101)
Burkholderia pseudomallei – evolutionary origin and spread - Salmonella (salmonella2332)
Genomic study of Typhi from typhoid-endemic regions of Asia and Africa and interactions with vaccines, antimicrobials, HIV and asymptomatic carriage - Peptoclostridium difficile (peptoclostridium-difficile3552)
VRECD-water - Vibrio (vibrio3411)
Vibrio cholerae sequencing - Staphylococcus (staphylococcus593)
Staphylococcus aureus ST239 diversity (Turkey) - Salmonella (salmonella3741)
Sequencing Salmonella Typhi strain - Oligella (oligella3454)
Genomic characterization of bladder bacteria from healthy and infected women - Shigella sonnei (shigella-sonnei1797)
Shigella sonnei & flexneri from around the world - Neisseria (neisseria1995)
Neisseria meningitidis study - Peptoclostridium (peptoclostridium2220)
Clostridium difficile toxin A-/B+ ribotype 017 global population structure - Salmonella (salmonella1689)
Salmonella Typhi and Salmonella Paratyphi A Strains II - Streptococcus (streptococcus3454)
Genomic characterization of bladder bacteria from healthy and infected women - Streptococcus (streptococcus3095)
PacBio sequencing of Streptococcus spp. - Klebsiella (klebsiella3305)
Sequencing bacterial genomes - Peptoclostridium (peptoclostridium2703)
Clostridium difficile clinical samples - Campylobacter jejuni (campylobacter-jejuni3370)
PacBio sequencing study of Campylobacter jejuni DNA methylation - Escherichia (escherichia3390)
Sequencing RNA samples from ETEC strains - Slackia (slackia3454)
Genomic characterization of bladder bacteria from healthy and infected women - Enterobacter (enterobacter3542)
Global population genomics of Campylobacter fetus - Enterobacter (enterobacter3380)
Sequencing Gram negative bacteria (HICF) - Mycoplasma amphoriforme (mycoplasma-amphoriforme692)
Mycoplasma and Chlamydia multiplex test - Shigella sonnei (shigella-sonnei2090)
Global diversity of Shigella species - Chlamydia (chlamydia692)
Mycoplasma and Chlamydia multiplex test - Peptoclostridium (peptoclostridium226)
Microevolution of hypervirulent clade and ribotype 027 Clostridium difficile isolates - Shigella sonnei (shigella-sonnei3626)
The distribution and evolution of Shigella sonnei across regional Latin America - Streptococcus (streptococcus3501)
Streptococcus pneumoniae from the pre-PCV7, PCV7 and PCV13 eras - Burkholderia (burkholderia619)
Burkholderia pseudomallei diversity - Klebsiella pneumoniae (klebsiella-pneumoniae2234)
TraDIS; identification of antimicrobial resistance genes in Salmonella Typhimurium - Mycobacterium (mycobacterium2066)
Karonga Prevention Study (KPS) : whole genome sequencing in a whole population - Salmonella (salmonella352)
Investigating the diversity of Vibrio cholerae isolates - Peptoclostridium (peptoclostridium2871)
Genomic analyses of novel pulsotypes and B1/027/NAP1 strains of Clostridium difficile isolated in Costa Rican hospitals during the last decade - Citrobacter rodentium (citrobacter-rodentium211)
Citrobacter rodentium transcriptomics (regulation) - Mycoplasma (mycoplasma2596)
Full genome sequencing of Mycoplasma species isolates from ruminants - Fluoribacter dumoffii (fluoribacter-dumoffii1723)
Phylogenomics and evolution of the genus Legionella - Salmonella (salmonella2315)
Atypical S. Enteritidis persistent infection in an immune deficient patient - Mycobacterium (mycobacterium277)
The genome sequence of antelope associated clade of the Mycobacterium tuberculosis complex (strain VIC4031ORYX) - Streptococcus (streptococcus1690)
Haemophilus parasuis genome comparisons - Salmonella (salmonella129)
Single Bacterial Cell Whole Genome Amplification - Sphingomonas (sphingomonas3248)
Hospital acquired Klebsiella pneumoniae and the role of colonization and transmission (Australia) - Ruminococcus (ruminococcus1921)
MetaHIT_KT01 - Escherichia (escherichia3338)
TraDIS to study Escherichia coli PHE isolates - Lactobacillus (lactobacillus2213)
Clostridium difficile 078 diversity - Klebsiella (klebsiella2359)
HPACC Murray project - Haemophilus (haemophilus2842)
Integration of the host and pathogen genetics in bacterial meningitis - Chlamydia trachomatis (chlamydia-trachomatis162)
Chlamydia trachomatis global diversity project - Gardnerella (gardnerella3454)
Genomic characterization of bladder bacteria from healthy and infected women - Bifidobacterium (bifidobacterium3422)
TraDIS Bifidobacterium breve - Shigella sonnei (shigella-sonnei2359)
HPACC Murray project - Salmonella (salmonella3695)
Urinary Tract Infection 16S study - Klebsiella pneumoniae (klebsiella-pneumoniae3305)
Sequencing bacterial genomes - Streptococcus (streptococcus2590)
Microevolution of Neisseria meningitidis during clonal waves of colonization and disease – phase 2 - Streptococcus (streptococcus2393)
Streptococcus pyogenes infections among children admitted to Kilifi District Hospital - Staphylococcus (staphylococcus1851)
Evolution of MRSA in a single institution over a 12 year period - Salmonella (salmonella138)
Salmonella Paratyphi A diversity (test pool) - Vibrio cholerae (vibrio-cholerae3411)
Vibrio cholerae sequencing - Mycobacterium (mycobacterium2926)
Mycobacterium tuberculosis (HICF) sequencing - Staphylococcus (staphylococcus114)
Evolution of MRSA During Hospital Transmission and Intercontinental Spread - Streptococcus (streptococcus615)
Streptococcus pneumoniae evolution - Streptococcus pneumoniae (streptococcus-pneumoniae293)
Deep sequencing within the Streptococcus pneumoniae antibiotic resistant pandemic clone PMEN1 - Staphylococcus (staphylococcus2036)
Staphylococcus aureus (BSAC) study - Klebsiella (klebsiella1721)
Whole genome sequencing of routine samples supplied by the diagnostic lab at Addenbrooke’s Hospital - Microbacterium (microbacterium3454)
Genomic characterization of bladder bacteria from healthy and infected women - Lactococcus lactis (lactococcus-lactis2213)
Clostridium difficile 078 diversity - Escherichia (escherichia3553)
VREC-water - Klebsiella (klebsiella3627)
Study of novel antibiotic targets - Clostridium sordellii (clostridium-sordellii2213)
Clostridium difficile 078 diversity - Vibrio (vibrio289)
Discovery of sequence diversity in Vibrio sp. - Salmonella (salmonella2342)
Antimicrobial resistance modifiers studied by TraDIS - Escherichia coli (escherichia-coli2880)
Multi Drug Resistant Gram Negative Rods (MDR-GNR) sequencing study - Burkholderia pseudomallei (burkholderia-pseudomallei2359)
HPACC Murray project - Acinetobacter (acinetobacter2309)
Staphylococcus aureus (MPROS) study - Raoultella (raoultella3380)
Sequencing Gram negative bacteria (HICF) - Staphylococcus aureus (staphylococcus-aureus2074)
Genomic characterisation of early UK MRSA isolates - Staphylococcus (staphylococcus3454)
Genomic characterization of bladder bacteria from healthy and infected women - Staphylococcus aureus (staphylococcus-aureus3483)
Transcriptomic analysis of investigation of the Type VII protein secretion system in Staphylococcus aureus - Klebsiella pneumoniae (klebsiella-pneumoniae2359)
HPACC Murray project - Haemophilus (haemophilus1943)
Diversity of MRSA - Campylobacter jejuni (campylobacter-jejuni264)
Discovery of sequence diversity in Campylobacter spp. - Pseudomonas (pseudomonas2500)
Mapping the evolution of Pseudomonas aeruginosa ST235 over 16 years in Russia and neighbouring countries - Salmonella (salmonella1943)
Diversity of MRSA - Carnobacterium (carnobacterium2233)
Lactobacillus in severe early childhood caries - Shigella (shigella1817)
Temporal & geographical Shigella genus diversity in Southern Vietnam 1994-2011 - Streptococcus pneumoniae (streptococcus-pneumoniae1714)
Streptococcus pneumoniae evolution and population structure during longitudinal sampling in a defined human population - Escherichia (escherichia3412)
Escherichia coli sequencing - Shigella sonnei (shigella-sonnei297)
Discovery of sequence diversity in Shigella sp. - Staphylococcus (staphylococcus2734)
Staphylococcus aureus (erythromycin resistant strains) study - Staphylococcus aureus (staphylococcus-aureus2960)
Staphylococcus aureus (National Collection) sequencing - Streptococcus (streptococcus1977)
Genome diversity in Streptococcus dysgalactiae subspecies equisimilis - Klebsiella (klebsiella3645)
Genomic basis for antibiotic resistant Klebsiella pneumoniae strains from Brazil - Burkholderia pseudomallei (burkholderia-pseudomallei265)
Discovery of sequence diversity in Burkholderia pseudomallei infection - Peptoclostridium (peptoclostridium3378)
Sequencing Clostridium difficile samples (HICF) - Streptococcus equi (streptococcus-equi263)
Discovery of sequence diversity in Streptococcus equi - Proteus mirabilis (proteus-mirabilis2359)
HPACC Murray project - Streptococcus (streptococcus607)
Identification of Streptococcus suis genes required for infection of pig nasal septum IVOC using TraDIS - Shigella (shigella1826)
Shigella flexneri from around the world - Streptococcus (streptococcus1703)
Streptococcus pneumoniae evolution and population structure during longitudinal sampling in a defined human population - Bifidobacterium (bifidobacterium1765)
MetaHIT Genome Improvement - Peptoclostridium (peptoclostridium2213)
Clostridium difficile 078 diversity - Klebsiella pneumoniae (klebsiella-pneumoniae1721)
Whole genome sequencing of routine samples supplied by the diagnostic lab at Addenbrooke’s Hospital - Streptococcus pneumoniae (streptococcus-pneumoniae2738)
An epidemiological study to evaluate the impact of the 10-valent pneumococcal conjugate vaccine in a previously unvaccinated population - Escherichia (escherichia3027)
Pacbio sequencing for TraDIS reference genomes - Acinetobacter (acinetobacter2880)
Multi Drug Resistant Gram Negative Rods (MDR-GNR) sequencing study - Mycobacterium (mycobacterium3494)
Chest Array: Direct sequencing of selected bacterial strains from clinical samples - Klebsiella pneumoniae (klebsiella-pneumoniae3627)
Study of novel antibiotic targets - Streptococcus equi (streptococcus-equi1957)
Evolution and transmission of Streptococcus zooepidemicus ST-209 during the 2010 outbreak of respiratory disease in Icelandic horses - Salmonella (salmonella298)
Salmonella bovismorbificans genome assembly - Peptoclostridium difficile (peptoclostridium-difficile2342)
Antimicrobial resistance modifiers studied by TraDIS - Streptococcus (streptococcus616)
Streptococcus pneumoniae ST180 diversity - Anaerotruncus (anaerotruncus2213)
Clostridium difficile 078 diversity - Mycoplasma (mycoplasma607)
Identification of Streptococcus suis genes required for infection of pig nasal septum IVOC using TraDIS - Candidatus (candidatus437)
MetaHit Single Cell WGA - Actinobacillus (actinobacillus1691)
Actinobacillus spp. genome comparisons - Shigella (shigella1797)
Shigella sonnei & flexneri from around the world - Escherichia (escherichia2342)
Antimicrobial resistance modifiers studied by TraDIS - Klebsiella (klebsiella2934)
Klebsiella colistin resistance with RNAseq - Klebsiella (klebsiella2896)
Colistin resistance in Klebsiella - Shigella (shigella2090)
Global diversity of Shigella species - Mycobacterium (mycobacterium629)
Mycobacterium avium subspecies paratuberculosis diversity - Shigella (shigella3626)
The distribution and evolution of Shigella sonnei across regional Latin America - Streptococcus pneumoniae (streptococcus-pneumoniae2435)
Effect of mass macrolide treatment on pneumococcal population - Salmonella (salmonella2985)
TraDIS method optimisation and validation - Staphylococcus (staphylococcus2208)
Staphylococcus aureus (CSARH & CSASH) study - Proteus (proteus3454)
Genomic characterization of bladder bacteria from healthy and infected women - Salmonella (salmonella319)
Salmonella Dublin & Pullorum genome assembly - Escherichia (escherichia2119)
Relationship of MLST structure of Escherichia coli species to genomic organisation complexity - Collinsella aerofaciens (collinsella-aerofaciens2213)
Clostridium difficile 078 diversity - Streptococcus pneumoniae (streptococcus-pneumoniae512)
Streptococcus pneumoniae serotype switching - Klebsiella pneumoniae (klebsiella-pneumoniae3645)
Genomic basis for antibiotic resistant Klebsiella pneumoniae strains from Brazil - Escherichia (escherichia1943)
Diversity of MRSA - Escherichia (escherichia2796)
Escherichia coli (PHE & BSAC collections) sequencing - Blautia (blautia1707)
Blautia producta genome comparisons - Escherichia coli (escherichia-coli2213)
Clostridium difficile 078 diversity - Chlamydophila (chlamydophila1994)
European-wide survey of Chlamydophila abortus - Coprococcus (coprococcus1765)
MetaHIT Genome Improvement - Burkholderia pseudomallei (burkholderia-pseudomallei2604)
Burkholderia pseudomallei – case-control study - Streptococcus pneumoniae (streptococcus-pneumoniae1715)
Streptococcus pneumoniae evolution and population structure during longitudinal sampling in a defined human population - Chlamydia (chlamydia2746)
Novel fish pathogens of the Chlamydiae - Neisseria (neisseria624)
Neisseria meningitidis transformation study - Staphylococcus (staphylococcus3305)
Sequencing bacterial genomes - Peptoclostridium difficile (peptoclostridium-difficile129)
Single Bacterial Cell Whole Genome Amplification - Streptococcus pneumoniae (streptococcus-pneumoniae3494)
Chest Array: Direct sequencing of selected bacterial strains from clinical samples - Streptococcus (streptococcus1692)
Streptococcus equi genome diversity - Eubacterium (eubacterium1921)
MetaHIT_KT01 - Salmonella (salmonella525)
Salmonella nitra genome sequencing - Klebsiella (klebsiella2952)
Whole genome sequencing of colistin resistant Klebsiella and Acinetobacter - Staphylococcus (staphylococcus304)
Genetic diversity in Staphylococcus aureus (European collection) - Campylobacter jejuni (campylobacter-jejuni312)
Campylobacter jejuni HPC5 (pseudolysogen) genome assembly - Bordetella (bordetella1747)
Whole genome sequencing of carried Streptococcus pneumoniae during the implementation of pneumococcal conjugate vaccines in the UK - Shigella sonnei (shigella-sonnei2199)
Shigella sonnei transmission study - Escherichia coli (escherichia-coli3631)
Lung Culturomics - Salmonella (salmonella2485)
A local dissection of the longitudinal trends in the genetic diversity and antimicrobial resistance amongst Klebsiella pneumoniae and Enterobacter sp. - Shigella (shigella2359)
HPACC Murray project - Peptoclostridium difficile (peptoclostridium-difficile532)
Clostridium difficile ribotype 027 project - Citrobacter (citrobacter3533)
Bloodstream surveillence across Africas - Acinetobacter (acinetobacter3575)
Colistin resistance of Acinetobacter baumannii with RNAseq - Klebsiella pneumoniae (klebsiella-pneumoniae2934)
Klebsiella colistin resistance with RNAseq - Streptococcus pneumoniae (streptococcus-pneumoniae136)
Streptococcus pneumoniae transcriptomics - Streptococcus (streptococcus293)
Deep sequencing within the Streptococcus pneumoniae antibiotic resistant pandemic clone PMEN1 - Klebsiella pneumoniae (klebsiella-pneumoniae2896)
Colistin resistance in Klebsiella - Mycobacterium (mycobacterium459)
Discovery of sequence diversity in Mycobacterium tuberculosis during outbreak - Salmonella (salmonella3029)
Transcriptional profiling of Salmonella Typhimurium during serum exposure - Streptococcus suis (streptococcus-suis1696)
Streptococcus suis genome comparisons - Burkholderia pseudomallei (burkholderia-pseudomallei2460)
Burkholderia pseudomallei MLST determination - Escherichia coli (escherichia-coli2193)
Comparative genome sequence analysis of the globally disseminated Escherichia coli ST131 lineage - Citrobacter (citrobacter2133)
Defining EPEC: evolution, global distribution and effector inventory - Citrobacter (citrobacter3380)
Sequencing Gram negative bacteria (HICF) - Streptococcus (streptococcus1872)
Genome diversity of spatially distinct Streptococcus agalactiae - Streptococcus (streptococcus3098)
Streptococcus suis in the pig meat supply chain - Actinobacillus (actinobacillus607)
Identification of Streptococcus suis genes required for infection of pig nasal septum IVOC using TraDIS - Escherichia (escherichia3555)
VRES-water - Chlamydophila pneumoniae (chlamydophila-pneumoniae1707)
Blautia producta genome comparisons - Lactobacillus (lactobacillus2233)
Lactobacillus in severe early childhood caries - Listeria (listeria2842)
Integration of the host and pathogen genetics in bacterial meningitis - Streptococcus pneumoniae (streptococcus-pneumoniae466)
Discovery of sequence diversity in Streptococcus pneumoniae serotype 1 - Mycobacterium (mycobacterium506)
Epidemiology of tuberculosis - Escherichia (escherichia2985)
TraDIS method optimisation and validation - Moraxella (moraxella3454)
Genomic characterization of bladder bacteria from healthy and infected women - Enterococcus (enterococcus2700)
Enterococci sequencing (BSAC collection) - Kiloniellales (kiloniellales1765)
MetaHIT Genome Improvement - Staphylococcus (staphylococcus2082)
Generation of draft genomes for supershedder and bacteriotherapy bacteria - Citrobacter (citrobacter211)
Citrobacter rodentium transcriptomics (regulation) - Klebsiella pneumoniae (klebsiella-pneumoniae2952)
Whole genome sequencing of colistin resistant Klebsiella and Acinetobacter - Enterobacter (enterobacter2342)
Antimicrobial resistance modifiers studied by TraDIS - Streptococcus (streptococcus2699)
100 Year Genomic Evolution of M1 strains of Streptococcus pyogenes - Klebsiella (klebsiella2585)
Colistin resistance in Klebsiella pneumoniae - Staphylococcus aureus (staphylococcus-aureus262)
Discovery of sequence diversity in Staphylococcus aureus ST22 and ST36 - Lactobacillus (lactobacillus3454)
Genomic characterization of bladder bacteria from healthy and infected women - Peptoclostridium (peptoclostridium632)
Clostridium difficile ribotype 027 resequencing - Lelliottia amnigena (lelliottia-amnigena2880)
Multi Drug Resistant Gram Negative Rods (MDR-GNR) sequencing study - Streptococcus pneumoniae (streptococcus-pneumoniae1716)
Streptococcus pneumoniae evolution and population structure during longitudinal sampling in a defined human population - Clostridium (clostridium1765)
MetaHIT Genome Improvement - Staphylococcus aureus (staphylococcus-aureus2282)
Virulent Australian Staphylococcus aureus ST93; population structure, transmission dynamics and clinical correlates - Salmonella (salmonella329)
Salmonella gene expression in vivo - Shigella dysenteriae (shigella-dysenteriae2927)
Phylogeography of Shigella spp. in Southeast Asia - Burkholderia (burkholderia3631)
Lung Culturomics - Lactococcus lactis (lactococcus-lactis2233)
Lactobacillus in severe early childhood caries - Enterobacter (enterobacter1943)
Diversity of MRSA - Streptococcus (streptococcus482)
Discovery of sequence diversity in Streptococcus pyogenes transmission study - Bifidobacterium (bifidobacterium2213)
Clostridium difficile 078 diversity - Neisseria (neisseria88)
Neisseria meningitidis variation during infection - Peptoclostridium (peptoclostridium247)
The genome sequence for Clostridium difficile strain R20291 - Blautia producta (blautia-producta2213)
Clostridium difficile 078 diversity - Escherichia coli (escherichia-coli2544)
Unravelling the influence of stx phage transduction on gene expression of atypical EPEC - Corynebacterium (corynebacterium3156)
PacBio sequencing of Corynebacterium diphtheriae - Haemophilus (haemophilus246)
Discovery of sequence diversity in Haemophilus influenzae - Streptococcus pyogenes (streptococcus-pyogenes1946)
Genomic and transcriptomic characterisation of Streptococcus pyogenes emm12 strains from the 2011 Hong Kong scarlet fever outbreak - Propionibacterium (propionibacterium3454)
Genomic characterization of bladder bacteria from healthy and infected women - Streptococcus pneumoniae (streptococcus-pneumoniae1922)
Population genomics of Streptococcus pneumoniae in the presence of vaccine and antimicrobial treatment - Peptoclostridium difficile (peptoclostridium-difficile2220)
Clostridium difficile toxin A-/B+ ribotype 017 global population structure - Peptoclostridium difficile (peptoclostridium-difficile2703)
Clostridium difficile clinical samples - Bacteroides fragilis (bacteroides-fragilis3631)
Lung Culturomics - Shigella sonnei (shigella-sonnei2927)
Phylogeography of Shigella spp. in Southeast Asia - Chlamydia trachomatis (chlamydia-trachomatis692)
Mycoplasma and Chlamydia multiplex test - Streptococcus (streptococcus1714)
Streptococcus pneumoniae evolution and population structure during longitudinal sampling in a defined human population - Peptoclostridium difficile (peptoclostridium-difficile380)
Genetic variation in recurrent infection with Clostridium difficile 027 - Salmonella (salmonella223)
Salmonella Typhisuis genome assembly - Staphylococcus aureus (staphylococcus-aureus2106)
Staphylococcus aureus (USFL) study - Mycoplasma amphoriforme (mycoplasma-amphoriforme3494)
Chest Array: Direct sequencing of selected bacterial strains from clinical samples - Staphylococcus (staphylococcus2074)
Genomic characterisation of early UK MRSA isolates - Peptoclostridium (peptoclostridium2027)
Comparative RNA-seq analysis of three bacterial species - Staphylococcus aureus (staphylococcus-aureus2462)
Staphylococcus aureus (MRSA) hospital samples - Proteus (proteus2359)
HPACC Murray project - Staphylococcus (staphylococcus3483)
Transcriptomic analysis of investigation of the Type VII protein secretion system in Staphylococcus aureus - Klebsiella pneumoniae (klebsiella-pneumoniae2585)
Colistin resistance in Klebsiella pneumoniae - Streptococcus pneumoniae (streptococcus-pneumoniae664)
Streptococcus pneumoniae global lineages - Peptoclostridium (peptoclostridium462)
Clostridium difficile Ribotype Reference Genome Project - Escherichia coli (escherichia-coli2600)
Variation of DNA damage and repair along a bacterial genome - Peptoclostridium difficile (peptoclostridium-difficile2871)
Genomic analyses of novel pulsotypes and B1/027/NAP1 strains of Clostridium difficile isolated in Costa Rican hospitals during the last decade - Enterococcus (enterococcus2701)
Enterococci sequencing (Addenbrooke’s collection) - Escherichia coli (escherichia-coli3256)
TraDIS to study T6SS in Pseudomonas aeruginosa - Shigella sonnei (shigella-sonnei2898)
Vaccination against Shigella and ETEC - Vibrio (vibrio3583)
PacBio sequencing of Vibrio cholerae samples - Citrobacter freundii (citrobacter-freundii2133)
Defining EPEC: evolution, global distribution and effector inventory - Enterococcus (enterococcus3554)
VREN-water - Salmonella (salmonella232)
Salmonella Dublin genome assembly - Neisseria (neisseria652)
Neisseria lactamica Colonisation - Citrobacter freundii (citrobacter-freundii3380)
Sequencing Gram negative bacteria (HICF) - Fusobacterium nucleatum (fusobacterium-nucleatum3454)
Genomic characterization of bladder bacteria from healthy and infected women - Streptococcus (streptococcus2738)
An epidemiological study to evaluate the impact of the 10-valent pneumococcal conjugate vaccine in a previously unvaccinated population - Klebsiella (klebsiella3550)
VRCO-water - Staphylococcus (staphylococcus2960)
Staphylococcus aureus (National Collection) sequencing - Mycobacterium (mycobacterium2982)
Mycobacterium bovis study on samples from New Zealand - Streptococcus (streptococcus512)
Streptococcus pneumoniae serotype switching - Streptococcus equi (streptococcus-equi1977)
Genome diversity in Streptococcus dysgalactiae subspecies equisimilis - Dermabacter (dermabacter3454)
Genomic characterization of bladder bacteria from healthy and infected women - Coprococcus (coprococcus2213)
Clostridium difficile 078 diversity - Enterobacter (enterobacter2985)
TraDIS method optimisation and validation - Morganella morganii (morganella-morganii3248)
Hospital acquired Klebsiella pneumoniae and the role of colonization and transmission (Australia) - Neisseria (neisseria1893)
Neisseria meningitidis diversity - Holdemania filiformis (holdemania-filiformis2213)
Clostridium difficile 078 diversity - Salmonella (salmonella1749)
Characterisation of the phylogenetic relationship of Salmonella enterica subsp. enterica (Subspecies I) Serotype 4,[5],12:i:- - Enterococcus (enterococcus1943)
Diversity of MRSA - Streptococcus pneumoniae (streptococcus-pneumoniae1717)
Streptococcus pneumoniae evolution and population structure during longitudinal sampling in a defined human population - Citrobacter rodentium (citrobacter-rodentium2119)
Relationship of MLST structure of Escherichia coli species to genomic organisation complexity - Escherichia (escherichia2880)
Multi Drug Resistant Gram Negative Rods (MDR-GNR) sequencing study - Barnesiella (barnesiella2082)
Generation of draft genomes for supershedder and bacteriotherapy bacteria - Bacteroides (bacteroides3631)
Lung Culturomics - Vibrio cholerae (vibrio-cholerae352)
Investigating the diversity of Vibrio cholerae isolates - Staphylococcus aureus (staphylococcus-aureus593)
Staphylococcus aureus ST239 diversity (Turkey) - Shigella (shigella2199)
Shigella sonnei transmission study - Streptococcus (streptococcus2435)
Effect of mass macrolide treatment on pneumococcal population - Salmonella (salmonella215)
Salmonella Bongori genome assembly - Pseudomonas (pseudomonas2439)
TraDIS investigating twitching mobility in Pseudomonas aeruginosa - Salmonella (salmonella374)
Recrudescent Salmonella study - Streptococcus pneumoniae (streptococcus-pneumoniae1688)
Population structure and diversity in non-encapsulated Streptococcus pneumoniae - Klebsiella (klebsiella3533)
Bloodstream surveillence across Africas - Streptococcus pyogenes (streptococcus-pyogenes482)
Discovery of sequence diversity in Streptococcus pyogenes transmission study - Streptococcus (streptococcus136)
Streptococcus pneumoniae transcriptomics - Salmonella (salmonella695)
Salmonella Paratyphi A global variation - Chlamydia trachomatis (chlamydia-trachomatis3693)
Chlamydia trachomatis from Australian Aboriginal people with trachoma are from novel lineages - Peptoclostridium (peptoclostridium2696)
TraDIS study on Clostridium difficile - Paenibacillus larvae (paenibacillus-larvae2513)
Unraveling genetic diversity and plasticity within the honey bee pathogenic bacterial species Paenibacillus larvae - Shigella sonnei (shigella-sonnei3533)
Bloodstream surveillence across Africas - Arthrobacter (arthrobacter3454)
Genomic characterization of bladder bacteria from healthy and infected women - Yersinia (yersinia2453)
Yersinia pseudotuberculosis project investigating localised evolution towards increased pathogenesis in the bovine host - Salmonella (salmonella3622)
Salmonella surveillance study - Streptococcus pyogenes (streptococcus-pyogenes2329)
Staphylococcus aureus lineages from the Indian subcontinent: emergence and global transmission - Serratia marcescens (serratia-marcescens1951)
Whole genome sequencing of naturally isolated Bacillus and Serratia strains that showed virulence to Caenorhabditis elegans - Escherichia coli (escherichia-coli3248)
Hospital acquired Klebsiella pneumoniae and the role of colonization and transmission (Australia) - Streptococcus (streptococcus1715)
Streptococcus pneumoniae evolution and population structure during longitudinal sampling in a defined human population - Klebsiella pneumoniae (klebsiella-pneumoniae3550)
VRCO-water - Streptococcus (streptococcus3494)
Chest Array: Direct sequencing of selected bacterial strains from clinical samples - Mycobacterium (mycobacterium2097)
MRSA library sequencing - Klebsiella (klebsiella3542)
Global population genomics of Campylobacter fetus - Klebsiella (klebsiella3380)
Sequencing Gram negative bacteria (HICF) - Haemophilus (haemophilus3631)
Lung Culturomics - Vibrio cholerae (vibrio-cholerae3583)
PacBio sequencing of Vibrio cholerae samples - Streptococcus (streptococcus466)
Discovery of sequence diversity in Streptococcus pneumoniae serotype 1 - Enterobacter (enterobacter1765)
MetaHIT Genome Improvement - Neisseria (neisseria3381)
Understanding the Molecular Epidemiology of Scottish Meningococci through Genome Sequencing - Salmonella (salmonella1814)
Salmonella ChIP-seq multiplex - Adlercreutzia (adlercreutzia2082)
Generation of draft genomes for supershedder and bacteriotherapy bacteria - Escherichia coli (escherichia-coli3454)
Genomic characterization of bladder bacteria from healthy and infected women - Escherichia coli (escherichia-coli2725)
Pathogenesis of Escherichia coli prostatitis and oncogenesis - Salmonella (salmonella233)
Salmonella Typhi Quails strain genome assembly - Vibrio (vibrio3549)
Understanding the historical spread of cholera from West Africa to South America in the 1990�s - Finegoldia (finegoldia3454)
Genomic characterization of bladder bacteria from healthy and infected women - Streptococcus equi (streptococcus-equi1692)
Streptococcus equi genome diversity - Legionella (legionella1723)
Phylogenomics and evolution of the genus Legionella - Burkholderia pseudomallei (burkholderia-pseudomallei619)
Burkholderia pseudomallei diversity - Lactobacillus (lactobacillus2082)
Generation of draft genomes for supershedder and bacteriotherapy bacteria - Citrobacter rodentium (citrobacter-rodentium2985)
TraDIS method optimisation and validation - Peptoclostridium (peptoclostridium116)
Discovery of sequence diversity in Clostridium difficile serogroup 027 (pooled without indexing) - Aeromonas (aeromonas2545)
Phylogenomic study of Aeromonas spp. associated with moderate to severe diarrhea or asymptomatic carriage in Pakistan - Clostridium (clostridium2213)
Clostridium difficile 078 diversity - Peptoclostridium difficile (peptoclostridium-difficile3378)
Sequencing Clostridium difficile samples (HICF) - Leuconostoc (leuconostoc2233)
Lactobacillus in severe early childhood caries - Alistipes (alistipes1921)
MetaHIT_KT01 - Klebsiella (klebsiella478)
Klebsiella pneumoniae diversity - Chlamydia (chlamydia3319)
Chlamydia pecorum comparative genomics - Streptococcus pneumoniae (streptococcus-pneumoniae1718)
Streptococcus pneumoniae evolution and population structure during longitudinal sampling in a defined human population - Klebsiella pneumoniae (klebsiella-pneumoniae3533)
Bloodstream surveillence across Africas - Melissococcus plutonius (melissococcus-plutonius2043)
Sequencing Melissococcus plutonius samples - Acinetobacter (acinetobacter3248)
Hospital acquired Klebsiella pneumoniae and the role of colonization and transmission (Australia) - Streptococcus pneumoniae (streptococcus-pneumoniae362)
Genetic diversity on Streptococcus pneumoniae in Malawi 2 - Peptoclostridium difficile (peptoclostridium-difficile2213)
Clostridium difficile 078 diversity - Staphylococcus aureus (staphylococcus-aureus114)
Evolution of MRSA During Hospital Transmission and Intercontinental Spread - Staphylococcus lugdunensis (staphylococcus-lugdunensis325)
Determination of the genome sequence of Staphylococcus lugdunensis strain 1003 - Klebsiella (klebsiella3487)
AMR Enterobacteriaceae in Blantyre - Peptoclostridium (peptoclostridium481)
Clostridium difficile ribotype 078 resequencing - Escherichia coli (escherichia-coli1690)
Haemophilus parasuis genome comparisons - Clostridium (clostridium3631)
Lung Culturomics - Streptococcus suis (streptococcus-suis244)
Discovery of sequence diversity in Streptococcus suis (Vietnam) - Haemophilus (haemophilus607)
Identification of Streptococcus suis genes required for infection of pig nasal septum IVOC using TraDIS - Pseudomonas (pseudomonas1943)
Diversity of MRSA - Escherichia (escherichia2213)
Clostridium difficile 078 diversity - Klebsiella pneumoniae (klebsiella-pneumoniae3380)
Sequencing Gram negative bacteria (HICF) - Salmonella (salmonella696)
Salmonella enterica variation - Burkholderia (burkholderia3248)
Hospital acquired Klebsiella pneumoniae and the role of colonization and transmission (Australia) - Enterobacter (enterobacter2880)
Multi Drug Resistant Gram Negative Rods (MDR-GNR) sequencing study - Streptococcus (streptococcus655)
Streptococcus pyogenes genome architecture - Shigella (shigella2927)
Phylogeography of Shigella spp. in Southeast Asia - Vibrio cholerae (vibrio-cholerae289)
Discovery of sequence diversity in Vibrio sp. - Streptococcus pneumoniae (streptococcus-pneumoniae2662)
Veterinary hospital MRSA infection study - Streptococcus (streptococcus1716)
Streptococcus pneumoniae evolution and population structure during longitudinal sampling in a defined human population - Chlamydia (chlamydia3693)
Chlamydia trachomatis from Australian Aboriginal people with trachoma are from novel lineages - Salmonella (salmonella225)
Genomic variation in a global set of Salmonella Paratyphi A isolates - Staphylococcus aureus (staphylococcus-aureus2661)
Staphylococcus aureus ST239 diversity in Thailand - Escherichia (escherichia3631)
Lung Culturomics - Salmonella (salmonella581)
Mali iNTS – Dublin & Enteritidis - Klebsiella (klebsiella3740)
Determining plasmid content of Klebsiella and Enterobacter samples from Addenbrookes hospital - Raoultella (raoultella2485)
A local dissection of the longitudinal trends in the genetic diversity and antimicrobial resistance amongst Klebsiella pneumoniae and Enterobacter sp. - Staphylococcus aureus (staphylococcus-aureus2588)
Staphylococcus aureus global survey - Staphylococcus (staphylococcus360)
Discovery of sequence diversity in Staphylococcus aureus ST22 (global collection) - Staphylococcus (staphylococcus325)
Determination of the genome sequence of Staphylococcus lugdunensis strain 1003 - Vibrio cholerae (vibrio-cholerae3549)
Understanding the historical spread of cholera from West Africa to South America in the 1990�s - Streptococcus (streptococcus664)
Streptococcus pneumoniae global lineages - Staphylococcus aureus (staphylococcus_aureus2462)
Staphylococcus aureus (MRSA) hospital samples - Proteus mirabilis (proteus_mirabilis2359)
HPACC Murray project - Clostridium difficile (clostridium-difficile2220)
Clostridium difficile toxin A-/B+ ribotype 017 global population structure - Taylorella equigenitalis (taylorella_equigenitalis524)
Taylorella equigenitalis genome sequencing - Shigella sonnei (shigella_sonnei2359)
HPACC Murray project - Clostridium difficile (clostridium-difficile2703)
Clostridium difficile clinical samples - Escherichia coli (escherichia_coli576)
Retrospective 0157:H7 TraDIS from screen in calves - Clostridium difficile (clostridium_difficile129)
Single Bacterial Cell Whole Genome Amplification - Clostridium difficile (clostridium-difficile2871)
Genomic analyses of novel pulsotypes and B1/027/NAP1 strains of Clostridium difficile isolated in Costa Rican hospitals during the last decade - Escherichia coli (escherichia_coli2880)
Multi Drug Resistant Gram Negative Rods (MDR-GNR) sequencing study - Streptococcus pneumoniae (streptococcus_pneumoniae362)
Genetic diversity on Streptococcus pneumoniae in Malawi 2 - Clostridium difficile (clostridium_difficile532)
Clostridium difficile ribotype 027 project - Streptococcus pneumoniae (streptococcus_pneumoniae2245)
Global Pneumococcal Sequencing (GPS) study I - Clostridium (clostridium2220)
Clostridium difficile toxin A-/B+ ribotype 017 global population structure - Klebsiella pneumoniae (klebsiella_pneumoniae2934)
Klebsiella colistin resistance with RNAseq - Clostridium (clostridium2703)
Clostridium difficile clinical samples - Klebsiella pneumoniae (klebsiella_pneumoniae2896)
Colistin resistance in Klebsiella - Clostridium (clostridium618)
Clostridium difficile genomic stability - Clostridium (clostridium2871)
Genomic analyses of novel pulsotypes and B1/027/NAP1 strains of Clostridium difficile isolated in Costa Rican hospitals during the last decade - Chlamydia trachomatis (chlamydia_trachomatis692)
Mycoplasma and Chlamydia multiplex test - Vibrio cholerae (vibrio_cholerae289)
Discovery of sequence diversity in Vibrio sp. - Klebsiella pneumoniae (klebsiella_pneumoniae2952)
Whole genome sequencing of colistin resistant Klebsiella and Acinetobacter - Streptococcus pyogenes (streptococcus_pyogenes1946)
Genomic and transcriptomic characterisation of Streptococcus pyogenes emm12 strains from the 2011 Hong Kong scarlet fever outbreak - Escherichia coli (escherichia_coli2213)
Clostridium difficile 078 diversity - Streptococcus pneumoniae (streptococcus_pneumoniae1714)
Streptococcus pneumoniae evolution and population structure during longitudinal sampling in a defined human population - Chlamydophila abortus (chlamydophila_abortus1994)
European-wide survey of Chlamydophila abortus - Clostridium difficile (clostridium-difficile632)
Clostridium difficile ribotype 027 resequencing - Clostridium difficile (clostridium-difficile2213)
Clostridium difficile 078 diversity - Clostridium difficile (clostridium_difficile380)
Genetic variation in recurrent infection with Clostridium difficile 027 - Shigella sonnei (shigella_sonnei628)
Shigella sonnei TraDIS - Streptococcus pneumoniae (streptococcus_pneumoniae2738)
An epidemiological study to evaluate the impact of the 10-valent pneumococcal conjugate vaccine in a previously unvaccinated population - Staphylococcus aureus (staphylococcus_aureus2661)
Staphylococcus aureus ST239 diversity in Thailand - Clostridium difficile (clostridium-difficile247)
The genome sequence for Clostridium difficile strain R20291 - Klebsiella pneumoniae (klebsiella_pneumoniae2585)
Colistin resistance in Klebsiella pneumoniae - Burkholderia pseudomallei (burkholderia_pseudomallei619)
Burkholderia pseudomallei diversity - Staphylococcus aureus (staphylococcus_aureus2588)
Staphylococcus aureus global survey - Staphylococcus aureus (staphylococcus_aureus262)
Discovery of sequence diversity in Staphylococcus aureus ST22 and ST36 - Shigella sonnei (shigella_sonnei2199)
Shigella sonnei transmission study - Escherichia coli (escherichia_coli2193)
Comparative genome sequence analysis of the globally disseminated Escherichia coli ST131 lineage - Streptococcus pneumoniae (streptococcus_pneumoniae517)
Pneumococcal in morbus diversity (QEH, Blantyre, Malawi) - Campylobacter coli (campylobacter_coli264)
Discovery of sequence diversity in Campylobacter spp. - Streptococcus pneumoniae (streptococcus_pneumoniae2435)
Effect of mass macrolide treatment on pneumococcal population - Clostridium difficile (clostridium-difficile462)
Clostridium difficile Ribotype Reference Genome Project - Clostridium sordellii (clostridium_sordellii2213)
Clostridium difficile 078 diversity - Streptococcus pyogenes (streptococcus_pyogenes2329)
Staphylococcus aureus lineages from the Indian subcontinent: emergence and global transmission - Streptococcus pneumoniae (streptococcus_pneumoniae1715)
Streptococcus pneumoniae evolution and population structure during longitudinal sampling in a defined human population - Staphylococcus aureus (staphylococcus_aureus2170)
Staphylococcus aureus (EOE) study - Staphylococcus aureus (staphylococcus_aureus2097)
MRSA library sequencing - Escherichia coli (escherichia_coli2544)
Unravelling the influence of stx phage transduction on gene expression of atypical EPEC - Clostridium difficile (clostridium_difficile2342)
Antimicrobial resistance modifiers studied by TraDIS - Staphylococcus aureus (staphylococcus_aureus2662)
Veterinary hospital MRSA infection study - Chlamydophila pneumoniae (chlamydophila_pneumoniae1707)
Blautia producta genome comparisons - Mycoplasma amphoriforme (mycoplasma_amphoriforme692)
Mycoplasma and Chlamydia multiplex test - Vibrio cholerae (vibrio_cholerae2689)
Salmonella enterica ser. Typhimurium in Argentina - Escherichia coli (escherichia_coli2600)
Variation of DNA damage and repair along a bacterial genome - Shigella sonnei (shigella_sonnei2927)
Phylogeography of Shigella spp. in Southeast Asia - Staphylococcus aureus (staphylococcus_aureus593)
Staphylococcus aureus ST239 diversity (Turkey) - Staphylococcus aureus (staphylococcus_aureus1719)
Staphylococcus aureus (MRSA) transmission in a London hospital - Clostridium (clostridium129)
Single Bacterial Cell Whole Genome Amplification - Shigella sonnei (shigella_sonnei2898)
Vaccination against Shigella and ETEC - Streptococcus pneumoniae (streptococcus_pneumoniae1716)
Streptococcus pneumoniae evolution and population structure during longitudinal sampling in a defined human population - Clostridium difficile (clostridium-difficile116)
Discovery of sequence diversity in Clostridium difficile serogroup 027 (pooled without indexing) - Shigella sonnei (shigella_sonnei297)
Discovery of sequence diversity in Shigella sp. - Chlamydia trachomatis (chlamydia_trachomatis2182)
Chlamydia trachomatis Sure Select V1 - Clostridium (clostridium532)
Clostridium difficile ribotype 027 project - Streptococcus pneumoniae (streptococcus_pneumoniae1922)
Population genomics of Streptococcus pneumoniae in the presence of vaccine and antimicrobial treatment - Staphylococcus aureus (staphylococcus_aureus2342)
Antimicrobial resistance modifiers studied by TraDIS - Clostridium difficile (clostridium-difficile481)
Clostridium difficile ribotype 078 resequencing - Streptococcus pyogenes (streptococcus_pyogenes2027)
Comparative RNA-seq analysis of three bacterial species - Clostridium difficile (clostridium-difficile2027)
Comparative RNA-seq analysis of three bacterial species - Staphylococcus aureus (staphylococcus_aureus1943)
Diversity of MRSA - Staphylococcus aureus (staphylococcus_aureus114)
Evolution of MRSA During Hospital Transmission and Intercontinental Spread - Escherichia coli (escherichia_coli2725)
Pathogenesis of Escherichia coli prostatitis and oncogenesis - Staphylococcus aureus (staphylococcus_aureus2843)
Staphylococcus aureus (MRSA) study - Citrobacter rodentium (citrobacter_rodentium211)
Citrobacter rodentium transcriptomics (regulation) - Streptococcus suis (streptococcus_suis2904)
Streptococcus suis in the pig meat supply chain - Streptococcus pneumoniae (streptococcus_pneumoniae1717)
Streptococcus pneumoniae evolution and population structure during longitudinal sampling in a defined human population - Clostridium difficile (clostridium_difficile498)
Clostridium difficile ribotype 017 study - Clostridium (clostridium2027)
Comparative RNA-seq analysis of three bacterial species - Blautia producta (blautia_producta2213)
Clostridium difficile 078 diversity - Escherichia coli (escherichia_coli1690)
Haemophilus parasuis genome comparisons - Clostridium difficile (clostridium-difficile2696)
TraDIS study on Clostridium difficile - Clostridium difficile (clostridium_difficile2220)
Clostridium difficile toxin A-/B+ ribotype 017 global population structure - Streptococcus pneumoniae (streptococcus_pneumoniae1688)
Population structure and diversity in non-encapsulated Streptococcus pneumoniae - Clostridium difficile (clostridium_difficile2703)
Clostridium difficile clinical samples - Streptococcus equi (streptococcus_equi263)
Discovery of sequence diversity in Streptococcus equi - Staphylococcus aureus (staphylococcus_aureus2985)
TraDIS method optimisation and validation - Clostridium (clostridium380)
Genetic variation in recurrent infection with Clostridium difficile 027 - Klebsiella pneumoniae (klebsiella_pneumoniae2117)
Understanding intrinsic antibiotic resistance in Klebsiella pneumoniae - Chlamydophila abortus (chlamydophila_abortus641)
Chlamydia trachomatis pilot - Clostridium difficile (clostridium-difficile618)
Clostridium difficile genomic stability - Clostridium difficile (clostridium_difficile2871)
Genomic analyses of novel pulsotypes and B1/027/NAP1 strains of Clostridium difficile isolated in Costa Rican hospitals during the last decade - Streptococcus pyogenes (streptococcus_pyogenes2393)
Streptococcus pyogenes infections among children admitted to Kilifi District Hospital - Streptococcus suis (streptococcus_suis1690)
Haemophilus parasuis genome comparisons - Clostridium (clostridium2696)
TraDIS study on Clostridium difficile - Escherichia coli (escherichia_coli2090)
Global diversity of Shigella species - Streptococcus pneumoniae (streptococcus_pneumoniae1718)
Streptococcus pneumoniae evolution and population structure during longitudinal sampling in a defined human population - Citrobacter rodentium (citrobacter_rodentium2119)
Relationship of MLST structure of Escherichia coli species to genomic organisation complexity - Staphylococcus aureus (staphylococcus_aureus2309)
Staphylococcus aureus (MPROS) study - Staphylococcus aureus (staphylococcus_aureus304)
Genetic diversity in Staphylococcus aureus (European collection) - Escherichia coli (escherichia_coli2359)
HPACC Murray project - Streptococcus pneumoniae (streptococcus_pneumoniae2662)
Veterinary hospital MRSA infection study - Klebsiella pneumoniae (klebsiella_pneumoniae2512)
Molecular epidemiology of Klebsiella pneumoniae invasive isolates from Kilifi - Streptococcus pneumoniae (streptococcus_pneumoniae270)
Genetic diversity on Streptococcus pneumoniae in Malawi 1 - Chlamydophila abortus (chlamydophila_abortus445)
Chlamydial genome assembly - Klebsiella pneumoniae (klebsiella_pneumoniae2598)
Nosocomial Klebsiella pneumoniae with a high mortality rate in Kathmandu, Nepal - Staphylococcus aureus (staphylococcus_aureus2683)
Staphylococcus aureus genome sequencing study - Staphylococcus lugdunensis (staphylococcus_lugdunensis325)
Determination of the genome sequence of Staphylococcus lugdunensis strain 1003 - Streptococcus pneumoniae (streptococcus_pneumoniae2842)
Integration of the host and pathogen genetics in bacterial meningitis - Clostridium difficile (clostridium_difficile2213)
Clostridium difficile 078 diversity - Citrobacter rodentium (citrobacter_rodentium2985)
TraDIS method optimisation and validation - Clostridium difficile (clostridium_difficile226)
Microevolution of hypervirulent clade and ribotype 027 Clostridium difficile isolates - Staphylococcus aureus (staphylococcus_aureus2221)
Population structure of a very early branching Staphylococcus aureus lineage - Klebsiella pneumoniae (klebsiella_pneumoniae2342)
Antimicrobial resistance modifiers studied by TraDIS - Streptococcus dysgalactiae (streptococcus_dysgalactiae655)
Streptococcus pyogenes genome architecture - Escherichia coli (escherichia_coli2433)
Comparative analysis of the two pandemic CTX-M-15 ESBL-producing E. coli lineages ST131 and ST648 from various hosts - Chlamydophila abortus (chlamydophila_abortus2069)
Acinetobacter baumannii multiple antimicrobial resistance - Staphylococcus aureus (staphylococcus_aureus2033)
Staphylococcus aureus (MSSA) study - Escherichia coli (escherichia_coli2198)
Whole genome sequencing of naturally isolated Escherichia coli from nursing homes in Ireland - Shigella sonnei (shigella_sonnei2200)
Shigella CJ DB project - Staphylococcus aureus (staphylococcus_aureus1981)
Diversity of MRSA II - Campylobacter jejuni (campylobacter_jejuni264)
Discovery of sequence diversity in Campylobacter spp. - Clostridium difficile (clostridium-difficile2951)
Clostridium difficile contaminating strains - Streptococcus pneumoniae (streptococcus_pneumoniae1943)
Diversity of MRSA - Streptococcus pneumoniae (streptococcus_pneumoniae2004)
Impact of HIV on nasopharyngeal carriage of Streptococcus pneumoniae - Streptococcus pyogenes (streptococcus_pyogenes1872)
Genome diversity of spatially distinct Streptococcus agalactiae - Staphylococcus aureus (staphylococcus_aureus2731)
TraDIS to study novel antibiotic targets - Streptococcus pneumoniae (streptococcus_pneumoniae3063)
Identifying pneumococcal genetic determinants for progression from colonisation to serious disease - Staphylococcus aureus (staphylococcus_aureus2025)
MRSA sequencing test - Streptococcus pneumoniae (streptococcus_pneumoniae2690)
Discovery of natural pneumococcal mutation rates during controlled colonisation of the human nasopharynx - Streptococcus pneumoniae (streptococcus_pneumoniae2852)
Genome sequence variation in a mouse model of invasive pneumococcal infection - Streptococcus pyogenes (streptococcus_pyogenes2699)
100 Year Genomic Evolution of M1 strains of Streptococcus pyogenes - Clostridium (clostridium498)
Clostridium difficile ribotype 017 study - Clostridium difficile (clostridium-difficile129)
Single Bacterial Cell Whole Genome Amplification - Klebsiella pneumoniae (klebsiella_pneumoniae2985)
TraDIS method optimisation and validation - Clostridium (clostridium2951)
Clostridium difficile contaminating strains - Streptococcus suis (streptococcus_suis3098)
Streptococcus suis in the pig meat supply chain - Escherichia coli (escherichia_coli2434)
Defining hidden traits of successful pathogenic E. coli lineages in Sequence type 10 strains - Corynebacterium diphtheriae (corynebacterium_diphtheriae196)
Discovery of sequence diversity in Corynebacterium diphtheriae - Clostridium difficile (clostridium-difficile532)
Clostridium difficile ribotype 027 project - Escherichia coli (escherichia_coli2084)
Atypical enteropathogenic E. coli virulence markers - Leptospira interrogans (leptospira_interrogans358)
Discovery of sequence diversity in Leptospira interrogans ST34 - Escherichia coli (escherichia_coli2961)
Escherichia coli (ETEC) samples from KEMRI - Citrobacter freundii (citrobacter_freundii2133)
Defining EPEC: evolution, global distribution and effector inventory - Streptococcus pneumoniae (streptococcus_pneumoniae1747)
Whole genome sequencing of carried Streptococcus pneumoniae during the implementation of pneumococcal conjugate vaccines in the UK - Staphylococcus aureus (staphylococcus_aureus2329)
Staphylococcus aureus lineages from the Indian subcontinent: emergence and global transmission - Klebsiella pneumoniae (klebsiella_pneumoniae2485)
A local dissection of the longitudinal trends in the genetic diversity and antimicrobial resistance amongst Klebsiella pneumoniae and Enterobacter sp. - Campylobacter jejuni (campylobacter_jejuni312)
Campylobacter jejuni HPC5 (pseudolysogen) genome assembly - Escherichia coli (escherichia_coli2067)
CF negative Enterotoxigenic Escherichia coli - Clostridium difficile (clostridium_difficile2027)
Comparative RNA-seq analysis of three bacterial species - Escherichia coli (escherichia_coli487)
E. coli MiniTn5 sequencing - Streptococcus suis (streptococcus_suis244)
Discovery of sequence diversity in Streptococcus suis (Vietnam) - Streptococcus pneumoniae (streptococcus_pneumoniae2862)
Indel detection in stressed pneumococci - Chlamydophila abortus (chlamydophila_abortus162)
Chlamydia trachomatis global diversity project - Escherichia coli (escherichia_coli693)
ETEC wild types and attenuated vaccine strains - Shigella sonnei (shigella_sonnei2485)
A local dissection of the longitudinal trends in the genetic diversity and antimicrobial resistance amongst Klebsiella pneumoniae and Enterobacter sp. - Serratia marcescens (serratia_marcescens1951)
Whole genome sequencing of naturally isolated Bacillus and Serratia strains that showed virulence to Caenorhabditis elegans - Shigella dysenteriae (shigella_dysenteriae2090)
Global diversity of Shigella species - Streptococcus pneumoniae (streptococcus_pneumoniae1945)
Streptococcus pneumoniae samples from Malawi - Clostridium difficile (clostridium-difficile380)
Genetic variation in recurrent infection with Clostridium difficile 027 - Klebsiella pneumoniae (klebsiella_pneumoniae2880)
Multi Drug Resistant Gram Negative Rods (MDR-GNR) sequencing study - Klebsiella pneumoniae (klebsiella_pneumoniae2486)
Investigation of carbapenem resistant Klebsiella pneumoniae isolates associated with nosocomial epidemics in Spain. - Staphylococcus aureus (staphylococcus_aureus360)
Discovery of sequence diversity in Staphylococcus aureus ST22 (global collection) - Shigella sonnei (shigella_sonnei2853)
Contemporary outbreaks of shigellosis at European arts festivals - Streptococcus pneumoniae (streptococcus_pneumoniae615)
Streptococcus pneumoniae evolution - Burkholderia pseudomallei (burkholderia_pseudomallei2101)
Burkholderia pseudomallei – evolutionary origin and spread - Clostridium difficile (clostridium_difficile2696)
TraDIS study on Clostridium difficile - Chlamydia trachomatis (chlamydia_trachomatis641)
Chlamydia trachomatis pilot - Campylobacter jejuni (campylobacter_jejuni2310)
Determination of spirality factors in Campylobacter jejuni - Staphylococcus aureus (staphylococcus_aureus1851)
Evolution of MRSA in a single institution over a 12 year period - Clostridium difficile (clostridium_difficile632)
Clostridium difficile ribotype 027 resequencing - Clostridium (clostridium226)
Microevolution of hypervirulent clade and ribotype 027 Clostridium difficile isolates - Staphylococcus aureus (staphylococcus_aureus2036)
Staphylococcus aureus (BSAC) study - Citrobacter rodentium (citrobacter_rodentium2561)
TraDIS Citrobacter rodentium - Clostridium difficile (clostridium_difficile247)
The genome sequence for Clostridium difficile strain R20291 - Clostridium difficile (clostridium-difficile1669)
Clostridium difficile ribotype 027 resequencing II - Streptococcus equi (streptococcus_equi1957)
Evolution and transmission of Streptococcus zooepidemicus ST-209 during the 2010 outbreak of respiratory disease in Icelandic horses - Staphylococcus aureus (staphylococcus_aureus361)
Discovery of sequence diversity in Staphylococcus aureus ST398 - Escherichia coli (escherichia_coli2133)
Defining EPEC: evolution, global distribution and effector inventory - Streptococcus pneumoniae (streptococcus_pneumoniae2363)
Streptococcus pneumoniae genetic diversity and invasive pneumococcal disease - Klebsiella pneumoniae (klebsiella_pneumoniae2731)
TraDIS to study novel antibiotic targets - Staphylococcus aureus (staphylococcus_aureus2734)
Staphylococcus aureus (erythromycin resistant strains) study - Streptococcus pneumoniae (streptococcus_pneumoniae616)
Streptococcus pneumoniae ST180 diversity - Chlamydia trachomatis (chlamydia_trachomatis445)
Chlamydial genome assembly - Streptococcus pyogenes (streptococcus_pyogenes1760)
Streptococcus pyogenes (GAS strains) diversity - Clostridium difficile (clostridium_difficile462)
Clostridium difficile Ribotype Reference Genome Project - Clostridium (clostridium1669)
Clostridium difficile ribotype 027 resequencing II - Burkholderia pseudomallei (burkholderia_pseudomallei2359)
HPACC Murray project - Escherichia coli (escherichia_coli1867)
Global phylogeny of enterotoxigenic Escherichia coli collection - Staphylococcus aureus (staphylococcus_aureus2208)
Staphylococcus aureus (CSARH & CSASH) study - Streptococcus suis (streptococcus_suis1696)
Streptococcus suis genome comparisons - Clostridium sordellii (clostridium_sordellii2304)
Neglected Clostridial pathogens - Streptococcus pneumoniae (streptococcus_pneumoniae293)
Deep sequencing within the Streptococcus pneumoniae antibiotic resistant pandemic clone PMEN1 - Citrobacter freundii (citrobacter_freundii2119)
Relationship of MLST structure of Escherichia coli species to genomic organisation complexity - Clostridium difficile (clostridium_difficile116)
Discovery of sequence diversity in Clostridium difficile serogroup 027 (pooled without indexing) - Clostridium difficile (clostridium_difficile2951)
Clostridium difficile contaminating strains - Clostridium difficile (clostridium-difficile498)
Clostridium difficile ribotype 017 study - Clostridium difficile (clostridium_difficile481)
Clostridium difficile ribotype 078 resequencing - Burkholderia pseudomallei (burkholderia_pseudomallei2604)
Burkholderia pseudomallei – case-control study - Serratia marcescens (serratia_marcescens2880)
Multi Drug Resistant Gram Negative Rods (MDR-GNR) sequencing study - Streptococcus pyogenes (streptococcus_pyogenes2088)
Streptococcus pyogenes isolates from Fiji - Burkholderia pseudomallei (burkholderia_pseudomallei2460)
Burkholderia pseudomallei MLST determination - Streptococcus equi (streptococcus_equi1977)
Genome diversity in Streptococcus dysgalactiae subspecies equisimilis - Citrobacter rodentium (citrobacter_rodentium310)
Citrobacter rodentium genome assembly - Staphylococcus aureus (staphylococcus_aureus705)
Major lineages of healthcare-associated methicillin-resistant Staphylococcus aureus in Singapore - Staphylococcus aureus (staphylococcus_aureus508)
Staphylococcus aureus ST239 diversity - Streptococcus suis (streptococcus_suis607)
Identification of Streptococcus suis genes required for infection of pig nasal septum IVOC using TraDIS - Staphylococcus aureus (staphylococcus_aureus2074)
Genomic characterisation of early UK MRSA isolates - Streptococcus pyogenes (streptococcus_pyogenes482)
Discovery of sequence diversity in Streptococcus pyogenes transmission study - Shigella dysenteriae (shigella_dysenteriae2927)
Phylogeography of Shigella spp. in Southeast Asia - Streptococcus pneumoniae (streptococcus_pneumoniae512)
Streptococcus pneumoniae serotype switching - Clostridium (clostridium632)
Clostridium difficile ribotype 027 resequencing - Streptococcus pyogenes (streptococcus_pyogenes2795)
Streptococcus pyogenes group A sequencing - Blautia producta (blautia_producta1707)
Blautia producta genome comparisons - Staphylococcus aureus (staphylococcus_aureus2960)
Staphylococcus aureus (National Collection) sequencing - Clostridium (clostridium247)
The genome sequence for Clostridium difficile strain R20291 - Clostridium difficile (clostridium_difficile618)
Clostridium difficile genomic stability - Streptococcus pneumoniae (streptococcus_pneumoniae136)
Streptococcus pneumoniae transcriptomics - Chlamydia trachomatis (chlamydia_trachomatis162)
Chlamydia trachomatis global diversity project - Escherichia coli (escherichia_coli2342)
Antimicrobial resistance modifiers studied by TraDIS - Streptococcus dysgalactiae (streptococcus_dysgalactiae1977)
Genome diversity in Streptococcus dysgalactiae subspecies equisimilis - Streptococcus equi (streptococcus_equi1692)
Streptococcus equi genome diversity - Streptococcus pneumoniae (streptococcus_pneumoniae466)
Discovery of sequence diversity in Streptococcus pneumoniae serotype 1 - Clostridium difficile (clostridium-difficile2342)
Antimicrobial resistance modifiers studied by TraDIS - Clostridium (clostridium462)
Clostridium difficile Ribotype Reference Genome Project - Escherichia coli (escherichia_coli2119)
Relationship of MLST structure of Escherichia coli species to genomic organisation complexity - Escherichia coli (escherichia_coli1943)
Diversity of MRSA - Escherichia coli (escherichia_coli2796)
Escherichia coli (PHE & BSAC collections) sequencing - Burkholderia pseudomallei (burkholderia_pseudomallei265)
Discovery of sequence diversity in Burkholderia pseudomallei infection - Streptococcus pneumoniae (streptococcus_pneumoniae2590)
Microevolution of Neisseria meningitidis during clonal waves of colonization and disease – phase 2 - Clostridium difficile (clostridium-difficile226)
Microevolution of hypervirulent clade and ribotype 027 Clostridium difficile isolates - Clostridium (clostridium2342)
Antimicrobial resistance modifiers studied by TraDIS - Shigella sonnei (shigella_sonnei1817)
Temporal & geographical Shigella genus diversity in Southern Vietnam 1994-2011 - Escherichia coli (escherichia_coli2985)
TraDIS method optimisation and validation - Streptococcus pneumoniae (streptococcus_pneumoniae664)
Streptococcus pneumoniae global lineages - Klebsiella pneumoniae (klebsiella_pneumoniae2359)
HPACC Murray project - Clostridium difficile (clostridium_difficile1669)
Clostridium difficile ribotype 027 resequencing II - Clostridium (clostridium116)
Discovery of sequence diversity in Clostridium difficile serogroup 027 (pooled without indexing) - Klebsiella pneumoniae (klebsiella_pneumoniae478)
Klebsiella pneumoniae diversity - Streptococcus pneumoniae (streptococcus_pneumoniae1703)
Streptococcus pneumoniae evolution and population structure during longitudinal sampling in a defined human population - Shigella sonnei (shigella_sonnei1797)
Shigella sonnei & flexneri from around the world - Staphylococcus aureus (staphylococcus_aureus2282)
Virulent Australian Staphylococcus aureus ST93; population structure, transmission dynamics and clinical correlates - Streptococcus pyogenes (streptococcus_pyogenes655)
Streptococcus pyogenes genome architecture - Shigella sonnei (shigella_sonnei2090)
Global diversity of Shigella species - Clostridium (clostridium481)
Clostridium difficile ribotype 078 resequencing - Klebsiella pneumoniae (klebsiella_pneumoniae1721)
Whole genome sequencing of routine samples supplied by the diagnostic lab at Addenbrooke’s Hospital - Vibrio cholerae (vibrio_cholerae352)
Investigating the diversity of Vibrio cholerae isolates - Staphylococcus aureus (staphylococcus_aureus2106)
Staphylococcus aureus (USFL) study
Related Links
NCTC
NCTC reference collection – generation of annotated and assembled genomes for 3,000 bacteria and 500 viruses
- Cronobacter (cronobacter3012)
- Plesiomonas (plesiomonas3012)
- Citrobacter freundii (citrobacter-freundii3012)
- Streptococcus pneumoniae (streptococcus-pneumoniae3012)
- Proteus (proteus3012)
- Streptococcus pyogenes (streptococcus-pyogenes3012)
- Leclercia adecarboxylata (leclercia-adecarboxylata3012)
- Raoultella (raoultella3012)
- Campylobacter coli (campylobacter-coli3012)
- Aggregatibacter (aggregatibacter3012)
- Cronobacter sakazakii (cronobacter-sakazakii3012)
- Mycobacterium (mycobacterium3012)
- Neisseria (neisseria3012)
- Mannheimia (mannheimia3012)
- Escherichia coli (escherichia-coli3012)
- Klebsiella (klebsiella3012)
- Morganella morganii (morganella-morganii3012)
- Ochrobactrum (ochrobactrum3012)
- Fusobacterium (fusobacterium3012)
- Haemophilus (haemophilus3012)
- Pantoea (pantoea3012)
- Clostridium (clostridium3012)
- Streptococcus (streptococcus3012)
- Escherichia (escherichia3012)
- Achromobacter (achromobacter3012)
- Providencia (providencia3012)
- Legionella (legionella3012)
- Chromobacterium (chromobacterium3012)
- Actinobacillus (actinobacillus3012)
- Proteus mirabilis (proteus-mirabilis3012)
- Edwardsiella (edwardsiella3012)
- Corynebacterium diphtheriae (corynebacterium-diphtheriae3012)
- Staphylococcus (staphylococcus3012)
- Klebsiella pneumoniae (klebsiella-pneumoniae3012)
- Enterobacter (enterobacter3012)
- Sphingobacterium (sphingobacterium3012)
- Elizabethkingia (elizabethkingia3012)
- Campylobacter (campylobacter3012)
- Pseudomonas (pseudomonas3012)
- Budvicia aquatica (budvicia-aquatica3012)
- Citrobacter (citrobacter3012)
- Campylobacter jejuni (campylobacter-jejuni3012)
- Helicobacter (helicobacter3012)
- Chryseobacterium (chryseobacterium3012)
- Pasteurella (pasteurella3012)
- Serratia marcescens (serratia-marcescens3012)
- Bacillus (bacillus3012)
- Acinetobacter (acinetobacter3012)
- Serratia (serratia3012)
- Vibrio (vibrio3012)
- Yersinia (yersinia3012)
- Corynebacterium (corynebacterium3012)
- Salmonella (salmonella3012)
- Bordetella (bordetella3012)
- Shimwellia (shimwellia3012)
- Fusobacterium nucleatum (fusobacterium-nucleatum3012)
- Peptoclostridium (peptoclostridium3012)
- Ewingella americana (ewingella-americana3012)
- Cedecea neteri (cedecea-neteri3012)
- Leminorella (leminorella3012)
- Peptoclostridium difficile (peptoclostridium-difficile3012)
- Shigella (shigella3037)
Shigella flexneri NCTC0001 genome sequence - Kluyvera (kluyvera3012)
- Avibacterium (avibacterium3012)
- Brachyspira (brachyspira3012)
- Staphylococcus aureus (staphylococcus-aureus3012)
- Moellerella wisconsensis (moellerella-wisconsensis3012)
- Fusobacterium ulcerans (fusobacterium-ulcerans3012)
- Yokenella regensburgei (yokenella-regensburgei3012)
- Tatumella (tatumella3012)
- Hafnia alvei (hafnia-alvei3012)
- Enterococcus (enterococcus2702)
Enterococci sequencing (NCTC collection) - Cedecea (cedecea3012)
- Streptococcus equi (streptococcus-equi3012)
- Pluralibacter gergoviae (pluralibacter-gergoviae3012)
- Nocardia farcinica (nocardia-farcinica3012)
- Kluyvera cryocrescens (kluyvera-cryocrescens3012)
- Streptococcus pneumoniae (streptococcus_pneumoniae3012)
- Escherichia coli (escherichia_coli3012)
- Streptococcus pyogenes (streptococcus_pyogenes3012)
- Clostridium difficile (clostridium-difficile3012)
- Campylobacter jejuni (campylobacter_jejuni3012)
- Clostridium difficile (clostridium_difficile3012)
- Staphylococcus aureus (staphylococcus_aureus3012)
- Providencia rustigianii (providencia-rustigianii3012)
- Corynebacterium diphtheriae (corynebacterium_diphtheriae3012)
BSAC Resistance Surveillance Programme
BSAC projects – British Society for Antimicrobial Chemotherapy projects
- bsac_2682
Pseudomonas aeruginosa genome sequencing study - bsac_2880
Multi Drug Resistant Gram Negative Rods (MDR-GNR) sequencing study - bsac_2795
Streptococcus pyogenes group A sequencing - bsac_2796
Escherichia coli (PHE & BSAC collections) sequencing - bsac_2700
Enterococci sequencing (BSAC collection) - bsac_2036
Staphylococcus aureus (BSAC) study
MetaHIT - METAgenomics of the Human Intestinal Tract
MetaHit – the role of the human intestinal microbiota in health and disease.
- blautia-producta.data
Blautia producta genome comparisons
Data use
This sequencing centre plans on publishing the completed and annotated sequences in a peer-reviewed journal as soon as possible. Permission of the principal investigator should be obtained before publishing analyses of the sequence/open reading frames/genes on a chromosome or genome scale. See our data sharing policy.