Dr Stijn van Dongen

Senior Software Developer

I work in the Cellular Genetics Informatics lab at the Wellcome Sanger institute, providing pipeline development and analysis services for RNA-seq, Chip-Seq, ATAC-seq and others. Currently our pipelines run under Nextflow, an elegant and powerful language to express and manage process dependencies and parallellisation.

My timeline

 

My publications

Loading publications...

Connect with me on Twitter

We've posted COG report #9 today which contains detailed modelling of the effect of the D614G spike mutation in the UK population. We see no evidence of an effect on disease severity, and potentially a small effect on transmissibility. Read more https://www.cogconsortium.uk/wp-content/uploads/2020/07/25th-June-2020-Report-COVID-19-Genomics-UK-COG-UK-Consortium.pdf @erikmvolz

Only a week left, it you had a career break and want to return to science apply to join us and help us identify new drug targets for immune diseases. You'll be part of great community @sangerinstitute @targetvalidate https://twitter.com/Sangercareers/status/1269917384363708426

Only a week left, it you had a career break and want to return to science apply to join us and help us identify new drug targets for immune diseases. You'll be part of great community @sangerinstitute @targetvalidate https://t.co/9IXV5a3VIf
Sanger Careers@Sangercareers

Join the Trynka/Bassett Project: Building variant effect maps of immune disease genes with CRISPR saturation mutagenesis

@GosiaTrynka @targetvalidate