GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Sudden cardiac arrest

The human homologues of the following genes have been identified in "Sudden cardiac arrest" studies:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
ACYP2 ACYP2 ENSDARG00000086271 1 Not determined 1
ap1g2 AP1G2 ENSDARG00000054337 None Not determined 1
atf1 ATF1 ENSDARG00000044301 None Not determined 2
cdh5 CDH4 ENSDARG00000075549 7 Not determined 6
CHL1 (1 of 2) CHL1 ENSDARG00000076233 6 Not determined 7
chl1a CHL1 ENSDARG00000077881 4 Not determined 7
chrnb2a CHRNB4 ENSDARG00000008674 3 Not determined 4
dcn DCN ENSDARG00000012066 2 Not determined 1
degs2 DEGS2 ENSDARG00000042544 1 Not determined 1
esr1 ESR1 ENSDARG00000004111 1 Not determined 14
fmo5 FMO1 ENSDARG00000016357 1 Not determined 1
gria1a GRIA1 ENSDARG00000021352 6 Not determined 4
gria1b GRIA1 ENSDARG00000032714 1 Not determined 4
kctd1 KCTD1 ENSDARG00000074056 1 Not determined 1
LOC568566 CHRNB4 ENSDARG00000019983 2 Not determined 4
LOC569662 CHRNB4 ENSDARG00000021392 1 Not determined 4
LOC569664 CLSTN2 ENSDARG00000060638 4 Not determined 4
LOC793236 FMO1 ENSDARG00000069333 1 Not determined 1
MCTP2 (1 of 2) MCTP2 ENSDARG00000073970 2 Not determined 5
NP_571161.1 CDH4 ENSDARG00000015002 2 Not determined 6
plce1 PLCE1 ENSDARG00000089601 5 Not determined 7
PLCE1 (1 of 2) PLCE1 ENSDARG00000087921 4 Not determined 7
plekhg7 PLEKHG7 ENSDARG00000062855 5 Not determined 1
pvalb8 OCM2 ENSDARG00000037790 None Not determined 1
pvalb9 OCM2 ENSDARG00000071601 1 Normal 1
si:ch211-173p18.9 EFCAB1 ENSDARG00000061377 None Not determined 1
si:ch211-195d17.2 E2F6 ENSDARG00000008119 1 Not determined 1
si:ch211-214d15.1 MCTP2 ENSDARG00000001414 3 Not determined 5
si:dkey-174k18.1 PARP4 ENSDARG00000069934 5 Not determined 2
si:dkey-239i20.2 FMO1 ENSDARG00000043518 None Not determined 1
si:dkey-239i20.4 FMO1 ENSDARG00000043514 None Not determined 1
si:dkeyp-55c8.1 CLSTN2 ENSDARG00000060637 4 Not determined 4
sin3aa SIN3A ENSDARG00000079716 2 Not determined 2
sin3ab SIN3A ENSDARG00000059812 3 Not determined 2
TMEFF2 (3 of 3) TMEFF2 ENSDARG00000089012 1 Not determined 2
TMEFF2 (2 of 3) TMEFF2 ENSDARG00000058699 None Not determined 2
tmeff2a TMEFF2 ENSDARG00000051824 4 Not determined 2
zfpm2a ZFPM2 ENSDARG00000040123 2 Not determined 5
zfpm2b ZFPM2 ENSDARG00000035997 2 Not determined 5
zgc:112054 ATF1 ENSDARG00000033660 None Not determined 2
zgc:165617 BAZ2B ENSDARG00000078061 1 Not determined 1
zgc:77439 FMO1 ENSDARG00000039211 4 Not determined 1
znf385b ZNF385B ENSDARG00000006065 None Not determined 1

The following reported genes could not be linked automatically to a zebrafish gene:

  • GARNL4
  • PXMP3
  • RSHL1
Short-link