GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Prostate-specific antigen levels

The human homologues of the following genes have been identified in "Prostate-specific antigen levels" studies:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
atf7ip ATF7IP ENSDARG00000069619 2 Not determined 2
fgfr2 FGFR2 ENSDARG00000058115 7 Not determined 10
hnf1ba HNF1B ENSDARG00000006615 1 Not determined 8
hnf1bb HNF1B ENSDARG00000022295 None Not determined 8
LOC100334188 TBX3 ENSDARG00000061509 None Not determined 8
nucks1b NUCKS1 ENSDARG00000012777 1 Not determined 4
slc41a1 SLC41A1 ENSDARG00000070214 1 Not determined 3
slc45a3 SLC45A3 ENSDARG00000075975 4 Not determined 3
tbx16 TBX3 ENSDARG00000007329 None Not determined 8
tbx3 TBX3 ENSDARG00000002216 5 Normal 8
tbx6 TBX3 ENSDARG00000006939 1 Not determined 8
tert TERT ENSDARG00000042637 3 Normal 18
wu:fc07e02 NUCKS1 ENSDARG00000078473 2 Not determined 4
zgc:77158 SLC45A3 ENSDARG00000013784 2 Not determined 3

The following reported genes could not be linked automatically to a zebrafish gene:

  • FLJ32569
  • KLK2
  • KLK3
  • KLK3
  • KLKP1
  • MSMB
  • MSMB
  • RAB7L1
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