GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

A genome-wide association study identifies three new risk loci for Kawasaki disease.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
bltk BLK ENSDARG00000007783 2 Not determined 11
LOC100330652 MLF1IP ENSDARG00000086704 None Not determined 1
LOC100333940 NUMBL ENSDARG00000087856 None Not determined 1
LOC795266 MLF1IP ENSDARG00000088924 None Not determined 1
mhc2dab HLA-DOB ENSDARG00000079105 None Not determined 2
mhc2dab HLA-DQB2 ENSDARG00000079105 None Not determined 3
NP_001091732.1 HLA-DOB ENSDARG00000071168 1 Not determined 2
NP_001091732.1 HLA-DQB2 ENSDARG00000071168 1 Not determined 3
numbl NUMBL ENSDARG00000024043 2 Not determined 1
si:busm1-104n07.3 HLA-DOB ENSDARG00000074510 1 Normal 2
si:busm1-104n07.3 HLA-DQB2 ENSDARG00000074510 1 Normal 3
si:busm1-160c18.3 HLA-DQB2 ENSDARG00000053738 None Not determined 3
si:busm1-160c18.3 HLA-DOB ENSDARG00000053738 None Not determined 2
si:busm1-160c18.3 HLA-DOB ENSDARG00000093706 None Not determined 2
si:busm1-160c18.3 HLA-DQB2 ENSDARG00000093706 None Not determined 3
si:busm1-194e12.12 HLA-DOB ENSDARG00000055447 None Not determined 2
si:busm1-194e12.12 HLA-DQB2 ENSDARG00000055447 None Not determined 3
si:busm1-228j01.4 HLA-DOB ENSDARG00000088872 2 Not determined 2
si:busm1-228j01.4 HLA-DQB2 ENSDARG00000088872 2 Not determined 3
si:busm1-228j01.6 HLA-DOB ENSDARG00000041705 1 Not determined 2
si:busm1-228j01.6 HLA-DQB2 ENSDARG00000041705 1 Not determined 3
si:ch211-261f7.2 FAM167A ENSDARG00000023952 1 Not determined 1
si:zfos-2070c2.3 HLA-DOB ENSDARG00000076307 None Not determined 2
si:zfos-2070c2.3 HLA-DQB2 ENSDARG00000076307 None Not determined 3
wu:fd58b11 HLA-DOB ENSDARG00000054921 None Not determined 2
wu:fd58b11 HLA-DQB2 ENSDARG00000054921 None Not determined 3
zgc:153067 HLA-DOB ENSDARG00000056330 2 Not determined 2
zgc:153067 HLA-DQB2 ENSDARG00000056330 2 Not determined 3
zgc:153092 FAM167A ENSDARG00000067665 None Not determined 1
zgc:194158 MIA ENSDARG00000052437 1 Not determined 1

The following reported genes could not be linked automatically to a zebrafish gene:

  • CD40
Short-link