GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Genome-wide association study of smoking behaviours in patients with COPD.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
anxa5a ANXA5 ENSDARG00000026406 1 Not determined 1
anxa5b ANXA5 ENSDARG00000016470 None Not determined 1
LOC559635 AGPHD1 ENSDARG00000077610 None Not determined 2
msh6 MSH6 ENSDARG00000011666 5 Not determined 1
plce1 PLCE1 ENSDARG00000089601 5 Not determined 7
PLCE1 (1 of 2) PLCE1 ENSDARG00000087921 4 Not determined 7
si:dkey-58b18.11 CDYL ENSDARG00000038985 2 Not determined 1
socs5a SOCS5 ENSDARG00000061573 1 Not determined 2
socs5b SOCS5 ENSDARG00000062745 6 Not determined 2
socs9 SOCS5 ENSDARG00000074493 1 Not determined 2
zgc:171550 AGPHD1 ENSDARG00000074341 2 Not determined 2

The following reported genes could not be linked automatically to a zebrafish gene:

  • CD96
  • FLJ40434
  • ZBTB9
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