GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Identification of a common variant in the TFR2 gene implicated in the physiological regulation of serum iron levels.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
mhc1uba HFE ENSDARG00000075963 None Not determined 20
mhc1ze HFE ENSDARG00000074765 None Not determined 20
mhc1zel HFE ENSDARG00000092162 1 Not determined 20
NP_919406.1 HFE ENSDARG00000086877 1 Not determined 20
Q8MHB3_DANRE HFE ENSDARG00000076734 None Not determined 20
Q8MHB6_DANRE HFE ENSDARG00000088022 1 Not determined 20
si:ch211-231a1.5 TMPRSS6 ENSDARG00000094087 None Not determined 14
si:ch211-287j19.6 HFE ENSDARG00000001470 2 Not determined 20
si:ch73-213j4.4 HFE ENSDARG00000092731 None Not determined 20
tfa TF ENSDARG00000016771 6 Not determined 5
TFR2 (2 of 2) TFR2 ENSDARG00000018406 2 Not determined 4
TFR2 (1 of 2) TFR2 ENSDARG00000089980 None Not determined 4
zgc:136614 HFE ENSDARG00000069471 None Not determined 20
zgc:172271 TF ENSDARG00000013240 2 Not determined 5
zgc:64115 HFE ENSDARG00000036588 4 Not determined 20

The following reported genes could not be linked automatically to a zebrafish gene:

  • SLC17A1
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