GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Genome-wide association scan of trait depression.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
cdh18 CDH18 ENSDARG00000061371 1 Not determined 1
CDH18 (1 of 2) CDH18 ENSDARG00000067692 None Not determined 1
cdh5 CDH13 ENSDARG00000075549 7 Not determined 15
DDX21 DDX21 ENSDARG00000063626 1 Not determined 1
EIF3F EIF3F ENSDARG00000077533 None Not determined 1
fam155a FAM155A ENSDARG00000075858 1 Not determined 4
FAM155A (1 of 2) FAM155A ENSDARG00000086224 None Not determined 4
itgb1a ITGB1 ENSDARG00000071863 4 Not determined 1
itgb1b ITGB1 ENSDARG00000053255 1 Not determined 1
itgb1b.1 ITGB1 ENSDARG00000053232 1 Not determined 1
itgb1b.2 ITGB1 ENSDARG00000022689 2 Not determined 1
LOC569768 GRM8 ENSDARG00000076508 4 Not determined 3
LOC792371 GRM8 ENSDARG00000077654 5 Not determined 3
roraa RORA ENSDARG00000031768 2 Not determined 11
rorab RORA ENSDARG00000001910 2 Not determined 11
si:ch211-122a20.1 CDH13 ENSDARG00000014215 1 Not determined 15

The following reported genes could not be linked automatically to a zebrafish gene:

  • SLFN12L
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