GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

A genome-wide association study of nasopharyngeal carcinoma identifies three new susceptibility loci.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
cdkn2b CDKN2B ENSDARG00000037262 2 Not determined 30
tnfrsf19 TNFRSF19 ENSDARG00000041869 2 Not determined 3

The following reported genes could not be linked automatically to a zebrafish gene:

  • CDNK2A
  • EVI1
  • HLA-A
  • HLA-B
  • HLA-C
  • HLA-DQ
  • HLA-DR
  • MDS1
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