GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Association of genome-wide variation with the risk of incident heart failure in adults of European and African ancestry: a prospective meta-analysis from the cohorts for heart and aging research in genomic epidemiology (CHARGE) consortium.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
btg1 BTG1 ENSDARG00000027249 1 Not determined 1
ch25h CH25H ENSDARG00000045190 None Not determined 2
ch25hl1.1 CH25H ENSDARG00000039381 None Not determined 2
ch25hl1.2 CH25H ENSDARG00000068138 None Not determined 2
ch25hl2 CH25H ENSDARG00000038728 1 Not determined 2
eve1 EVX1 ENSDARG00000056012 None Not determined 1
evx1 EVX1 ENSDARG00000005628 1 Not determined 1
fbxl22 USP3 ENSDARG00000045641 4 Not determined 1
GNA15 (2 of 5) GNA15 ENSDARG00000056654 2 Not determined 1
gnav1 GNA15 ENSDARG00000043006 4 Not determined 1
LOC100005337 CH25H ENSDARG00000093818 None Not determined 2
LOC100334697 BCHE ENSDARG00000053709 2 Not determined 5
LRIG3 LRIG3 ENSDARG00000079363 4 Not determined 1
prickle1a PRICKLE1 ENSDARG00000040649 1 Not determined 2
prickle1b PRICKLE1 ENSDARG00000045694 1 Not determined 2
sh3gl2 SH3GL2 ENSDARG00000023600 2 Not determined 5
SH3GL2 (1 of 2) SH3GL2 ENSDARG00000039901 None Not determined 5
si:ch211-207c7.1 GNA15 ENSDARG00000071416 1 Not determined 1
si:ch211-207c7.2 GNA15 ENSDARG00000092481 None Not determined 1
si:ch211-207c7.3 GNA15 ENSDARG00000092948 None Not determined 1
si:ch211-222g23.4 TBC1D4 ENSDARG00000075156 3 Not determined 1
si:ch211-71n6.4 BCHE ENSDARG00000088003 None Not determined 5
si:dkey-30c15.17 BCHE ENSDARG00000058492 1 Normal 5
tmtc1 TMTC1 ENSDARG00000063149 6 Not determined 2
zgc:100942 GNA15 ENSDARG00000016364 None Not determined 1
zgc:77396 SNX16 ENSDARG00000046072 None Not determined 3
zgc:92006 RPUSD4 ENSDARG00000012674 1 Not determined 1

The following reported genes could not be linked automatically to a zebrafish gene:

  • LOC100129376
  • LOC339760
  • MOBKL2B
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