GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Sequence variants affecting eosinophil numbers associate with asthma and myocardial infarction.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
gata2a GATA2 ENSDARG00000059327 None Not determined 2
gata2b GATA2 ENSDARG00000009094 1 Not determined 2
LOC799279 IL1RL1 ENSDARG00000090844 None Not determined 8
SH2B3 (1 of 2) SH2B3 ENSDARG00000069958 None Not determined 19
si:dkeyp-1e8.2 SH2B3 ENSDARG00000093095 None Not determined 19
si:zfos-1425h8.1 IKZF2 ENSDARG00000069111 1 Not determined 1
wdr36 WDR36 ENSDARG00000004774 2 Not determined 2

The following reported genes could not be linked automatically to a zebrafish gene:

  • IL5
  • MHC
  • TSLP
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