Wellcome Sanger Institute

Pathogen Informatics

Parasites and Microbes

The Pathogen Informatics team develop and maintain software applications and systems to support the research activities of the Parasites and Microbes programme.

This currently includes the following activities:

  • Development and maintenance of automated pipelines for tracking and analysis of sequencing data
  • Development of open-source software tools for downstream analysis of genomic data, such as ArtemisRoary, or Ariba
  • Ad-hoc informatics support to members of the programme via a helpdesk
  • Bioinformatics training courses for in-house scientists and the wider community
  • Maintenance of websites that make genomic data and research findings available to the community, such as GeneDB
  • Development of a platform for community genome annotation

Core team

Photo of Dr Magnus Manske

Dr Magnus Manske

Senior Staff Scientist

Photo of Dr T R Stickland

Dr T R Stickland

Senior Scientific Programmer

Previous team members

Photo of Dr Andrew Page

Dr Andrew Page

Principal Computer Programmer

Photo of Dr Nishadi H. De Silva

Dr Nishadi H. De Silva

Senior Software Developer

Photo of Dr Martin Hunt

Dr Martin Hunt

Senior Bioinformatician

Photo of Dr Jacqueline A Keane

Dr Jacqueline A Keane

Senior Scientific Manager

Associated research

Related groups

 

Publications

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