Zebrafish Genome Project
The Sanger Institute started the zebrafish genome sequencing project in 2001 and has generated several genome assemblies of the Tuebingen strain. After the release of Zv9, the zebrafish genome project joined the Genome Reference Consortium (GRC) for further improvement and ongoing maintenance. The GRC has now released a new reference assembly, GRCz10. After the release of the next assembly GRCz11, planned for 2017, our GRC partners at ZFIN have agreed to take over the responsibility for further updates and maintenance.
Email us at firstname.lastname@example.org with your comments and enquiries, your input is welcome!
- Download the latest assembly.
- Assemblies from Zv2 to GRCz10
- Download clone sequences generated for the genome project.
- Download the manuals form the latest open door workshop at the 9th EZM in Oslo, 2015.
- Blast against finished and unfinished clones generated for the genome project.
- Access the daily updated zebrafish clone path: search for clones with their accession or name, browse the paths and download the sequences.
The zebrafish reference genome sequence and its relationship to the human genome.
This sequencing centre plans on publishing the completed and annotated sequences in a peer-reviewed journal as soon as possible. Permission of the principal investigator should be obtained before publishing analyses of the sequence/open reading frames/genes on a chromosome or genome scale. See our data sharing policy.
Clones that have been generated for the genome project can be ordered as specified below:
|library||external prefix||internal Prefix||Order Contact|
|ZfishFos||ZFOS||zF||This library is unfortunately not available anymore, please contact email@example.com for alternatives|
Data Release Policy
The Zebrafish Genomes Project releases sequence data and variant calls as a service to the research community. These data are released in accordance with the Fort Lauderdale agreement and Toronto agreements. As producers of these data we reserve the right to be the first to publish a genome-wide analysis of the data we have generated. The pre-publication data that we release via this website is embargoed for publication except for analyses of single chromosomes in single strains or single gene loci across multiple strains. We strongly encourage researchers to contact us if there are any queries about referencing or publishing analysis based on pre-publication data obtained via this website. More information on the Wellcome Trust Sanger Institute's data sharing policy.
If you have a query about using the project data in your studies or publications, we are happy to answer any queries and can be contacted at firstname.lastname@example.org