Zebrafish Mutation Project
About the Partnership
With knockout alleles in more than 60% of protein-coding genes, this project is uniquely capable of annotating gene function to thousands of vertebrate genes of which we currently know very little.
As a first pass analysis to annotate gene function to the ZMP allele collection, a high throughput phenotyping pipeline has been established to evaluate developmental morphology in the first 5 days of development. With its rapid and translucent development, by day 5 a zebrafish embryo has developed the majority of vertebrate structures and organs; eyes, brain, heart, liver, kidney, pancreas, blood cells, etc... Morphological features of the developing larvae are assessed and changes in their features are linked back to identified mutations.
An important aspect of the ZMP is to make our vast collection of alleles available to researchers across the entire world. This is achieved through our partners, the Zebrafish International Resource Center (ZIRC) and the European Zebrafish Resource Center (EZRC), who provide distribution services for the zebrafish community.
Partners and Funders
A systematic genome-wide analysis of zebrafish protein-coding gene function.
Multi-allelic phenotyping--a systematic approach for the simultaneous analysis of multiple induced mutations.
Methods (San Diego, Calif.) 2013;62;3;197-206
High-throughput and quantitative genome-wide messenger RNA sequencing for molecular phenotyping.
BMC genomics 2015;16;578