GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

A genome-wide association study of inflammatory biomarker changes in response to fenofibrate treatment in the Genetics of Lipid Lowering Drug and Diet Network.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
ahcyl2 AHCYL2 ENSDARG00000039343 2 Not determined 1
apbb1ip APBB1IP ENSDARG00000016505 1 Not determined 2
drgx DRGX ENSDARG00000069329 3 Not determined 1
LOC100003594 FAM135B ENSDARG00000079899 1 Not determined 2
NPAS3 NPAS3 ENSDARG00000079182 None Not determined 2
spon1a SPON1 ENSDARG00000010029 1 Normal 3
spon1b SPON1 ENSDARG00000023694 1 Not determined 3
zgc:158222 AHCYL2 ENSDARG00000051873 1 Not determined 1
zgc:162915 CYP4F8 ENSDARG00000053530 None Not determined 1

The following reported genes could not be linked automatically to a zebrafish gene:

  • COMMD10
  • IL2RA
  • IL2RA
  • Intergeic
* quick link - http://q.sanger.ac.uk/k886vsc8