GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Meta-analysis of genome-wide association data of bipolar disorder and major depressive disorder.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
ANK3 (2 of 2) ANK3 ENSDARG00000061736 15 Not determined 6
cacna1c CACNA1C ENSDARG00000008398 6 1 phenotype 7
CACNA1C CACNA1C ENSDARG00000037904 3 Not determined 7
dmtf1 DMTF1 ENSDARG00000025824 2 Not determined 2
FAT4 FAT4 ENSDARG00000045665 5 Normal 2
LOC556807 FAT4 ENSDARG00000078088 11 Not determined 2
Q5RHP7_DANRE SYNE1 ENSDARG00000009499 23 2 normal 5
si:ch211-212m21.5 COLEC12 ENSDARG00000061140 2 Not determined 2
si:dkey-22o22.2 FAT4 ENSDARG00000079247 9 Not determined 2
SYNE1 (1 of 2) SYNE1 ENSDARG00000063068 33 Not determined 5
thoc1 THOC1 ENSDARG00000088246 None Not determined 1
zgc:112101 C7orf23 ENSDARG00000042214 1 Not determined 1
zgc:171763 ANK3 ENSDARG00000077582 10 Not determined 6
zgc:85676 C7orf23 ENSDARG00000033179 1 Not determined 1

The following reported genes could not be linked automatically to a zebrafish gene:

  • C15orf53
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