GWAS

(GWAS data used on the Zebrafish Mutation Project Web site comes from http://www.genome.gov/gwastudies/.)

Molecular genetics of adult ADHD: converging evidence from genome-wide association and extended pedigree linkage studies.

The human homologues of the following genes have been identified in this study:

Gene name Reported Gene Ensembl ID Alleles found Associated phenotype Study Count
ASTN2 (3 of 3) ASTN2 ENSDARG00000090831 None Not determined 9
ASTN2 (2 of 3) ASTN2 ENSDARG00000086640 None Not determined 9
ASTN2 (1 of 3) ASTN2 ENSDARG00000089410 1 Not determined 9
cdh5 CDH13 ENSDARG00000075549 5 Not determined 15
crygm1 CRYGC ENSDARG00000016421 None Not determined 1
crygm2a CRYGC ENSDARG00000057536 1 Not determined 1
crygm2b CRYGC ENSDARG00000078876 None Not determined 1
crygm2c CRYGC ENSDARG00000069831 1 Not determined 1
crygm2d1 CRYGC ENSDARG00000087324 None Not determined 1
crygm2d11 CRYGC ENSDARG00000069827 1 Not determined 1
crygm2d12 CRYGC ENSDARG00000069801 2 Not determined 1
crygm2d13 CRYGC ENSDARG00000057460 1 Not determined 1
crygm2d14 CRYGC ENSDARG00000087301 None Not determined 1
crygm2d15 CRYGC ENSDARG00000069826 None Not determined 1
crygm2d3 CRYGC ENSDARG00000088823 1 Not determined 1
crygm2d4 CRYGC ENSDARG00000087164 None Not determined 1
crygm2d5 CRYGC ENSDARG00000069792 1 Not determined 1
crygm2d6 CRYGC ENSDARG00000073874 None Not determined 1
crygm2d7 CRYGC ENSDARG00000076572 3 Not determined 1
crygm2d8 CRYGC ENSDARG00000069817 None Not determined 1
crygm2d9 CRYGC ENSDARG00000073750 None Not determined 1
crygm2e CRYGC ENSDARG00000044875 None Not determined 1
crygm2f CRYGC ENSDARG00000078134 None Not determined 1
crygm3 CRYGC ENSDARG00000078189 None Not determined 1
crygm5 CRYGC ENSDARG00000041179 None Not determined 1
crygm6 CRYGC ENSDARG00000040735 None Not determined 1
crygm7 CRYGC ENSDARG00000040736 None Not determined 1
crygmx CRYGC ENSDARG00000053862 None Not determined 1
crygmxl1 CRYGC ENSDARG00000018797 None Not determined 1
crygmxl2 CRYGC ENSDARG00000074001 2 Not determined 1
GPC6 (4 of 4) GPC6 ENSDARG00000090456 None Not determined 9
GPC6 (3 of 4) GPC6 ENSDARG00000036468 2 Not determined 9
GPC6 (2 of 4) GPC6 ENSDARG00000086960 None Not determined 9
itga11a ITGA11 ENSDARG00000036086 5 Not determined 2
itga11b ITGA11 ENSDARG00000007950 2 Not determined 2
ITGAE ITGAE ENSDARG00000057787 4 Not determined 1
LOC100333987 MAN2A2 ENSDARG00000063101 4 Not determined 1
mmp24 MMP24 ENSDARG00000018896 None Not determined 2
MYT1L (2 of 2) MYT1L ENSDARG00000006212 1 Normal 2
myt1la MYT1L ENSDARG00000008209 3 Not determined 2
NP_001007792.1 CRYGC ENSDARG00000008219 1 Normal 1
NP_001121673.1 MAP1B ENSDARG00000060434 4 Not determined 1
NP_956352.1 REEP5 ENSDARG00000091537 None Not determined 1
nt5dc3 NT5DC3 ENSDARG00000062949 1 Not determined 2
ppm1f PPM1F ENSDARG00000005786 3 Not determined 1
reep5 REEP5 ENSDARG00000052661 None Not determined 1
si:ch211-122a20.1 CDH13 ENSDARG00000014215 1 Not determined 15
si:ch211-212n6.16 CRYGC ENSDARG00000086658 None Not determined 1
si:ch211-212n6.17 CRYGC ENSDARG00000087765 None Not determined 1
si:ch211-212n6.18 CRYGC ENSDARG00000086917 None Not determined 1
si:ch211-212n6.8 CRYGC ENSDARG00000076693 None Not determined 1
si:ch211-223p8.5 C10orf79 ENSDARG00000001825 3 Not determined 1
si:ch211-46o5.1 CSMD2 ENSDARG00000001559 8 Not determined 5
si:ch211-55g3.6 CRYGC ENSDARG00000076790 None Not determined 1
si:ch211-89p1.4 C9orf98 ENSDARG00000030961 2 Not determined 2
si:ch73-310g9.3 DNM1 ENSDARG00000009281 3 Not determined 1
si:ch73-362g18.2 CREB5 ENSDARG00000070536 None Not determined 4
si:dkey-57a22.14 CRYGC ENSDARG00000092764 None Not determined 1
si:dkey-57a22.15 CRYGC ENSDARG00000093318 None Not determined 1
supt3h SUPT3H ENSDARG00000002776 3 Not determined 7
tfeb TFEB ENSDARG00000010794 1 Not determined 1
unc5b UNC5B ENSDARG00000033327 3 Normal 2
zgc:153846 CRYGC ENSDARG00000040738 None Not determined 1
zgc:162402 CRYGC ENSDARG00000091148 None Not determined 1
zgc:165347 CRYGC ENSDARG00000088687 None Not determined 1
zgc:171629 GPC6 ENSDARG00000091739 None Not determined 9
zgc:86723 CRYGC ENSDARG00000086912 1 Not determined 1

The following reported genes could not be linked automatically to a zebrafish gene:

  • AK094352
  • ATP2C2
  • MGC33657
  • MOBP
  • TLL2
* quick link - http://q.sanger.ac.uk/prvkj8fk