<=>End overlap alignment

Alignment #1 HSP: 56 bps / non-identical: 50 bps

Full alignment

CU182773.4	24464	AAGAAGACAAACAAAGTTGTTTCATCTCAACTCAACAA--CCTTAATATT	24511
			||||||| |||||| ||| |||  ||||||||||||||  |||||||| |
CU075534.9	66825	AAGAAGAGAAACAACGTTATTTTGTCTCAACTCAACAAACCCTTAATACT	66874

CU182773.4	24512	TGTGTCAA	24519
			||||||||
CU075534.9	66875	TGTGTCAA	66882

Compact alignment

CU182773.4	24464	AAGAAGACAAACAAAGTTGTTTCATCTCAACTCAACAA--CCTTAATATT	24511
			||||||| |||||| ||| |||  ||||||||||||||  |||||||| |
CU075534.9	66825	AAGAAGAGAAACAACGTTATTTTGTCTCAACTCAACAAACCCTTAATACT	66874

skip 8 bps 100% identity alignment

Overview

Query
CU182773.4 - 91967 bps
Hit
CU075534.9 - 78594 bps
Total alignments
10
Best alignment
alignment #1 (HSP: 56 bps)
Best alignment cartoon

Alternate alignments

#%IDscoreHSPstartendstrandhstarthendhstrand
186.2130562446424519166825668821
290.081772835894559227111583118641
394.081471853500835192118967191521
410050966736467459123235233301
510051976736367459-140788408841
610030626725267313144941450021
778.57722243075030973163747639701
891.43971413157931719164543646821
989.3665982459524692166686667791
1073.96511162459524710166956670511
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