<=>End overlap alignment

Alignment #1 HSP: 2000 bps / non-identical: 0 bps

Full alignment

BX000470.24	1	AAGCTTATTACATGAGCTGCGCACCGCGACCGACTATGCTCTTCGGACTA	50
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	163367	AAGCTTATTACATGAGCTGCGCACCGCGACCGACTATGCTCTTCGGACTA	163416

BX000470.24	51	CTAAGTCCGCCGCGTGTGCGCTGGGGAGGACGATGTCCACACTTGTGGTT	100
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	163417	CTAAGTCCGCCGCGTGTGCGCTGGGGAGGACGATGTCCACACTTGTGGTT	163466

BX000470.24	101	CAGGAACGCCACCTCTGGCTAAACCTGGCCGATATGCGCGACGTTGACAA	150
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	163467	CAGGAACGCCACCTCTGGCTAAACCTGGCCGATATGCGCGACGTTGACAA	163516

BX000470.24	151	AGTTCGCTTTCTTGACTCGCCCATATCCCAGGCTGGCCTGTTCGGCGACA	200
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	163517	AGTTCGCTTTCTTGACTCGCCCATATCCCAGGCTGGCCTGTTCGGCGACA	163566

BX000470.24	201	CCGTCGGTGAATTCACCCAGGAATTCAAGGCGGTGAAAGAGCAGTCGGAT	250
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	163567	CCGTCGGTGAATTCACCCAGGAATTCAAGGCGGTGAAAGAGCAGTCGGAT	163616

BX000470.24	251	GCGATGGGCAATGTCATCTATCGGCGTGGCCGTAAGCCCGCTCCGCCCGC	300
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	163617	GCGATGGGCAATGTCATCTATCGGCGTGGCCGTAAGCCCGCTCCGCCCGC	163666

BX000470.24	301	CGAGCCATCCACCTCCGCTGTTCCTCGCCGAGGGCGCCCGCCAACGAGTG	350
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	163667	CGAGCCATCCACCTCCGCTGTTCCTCGCCGAGGGCGCCCGCCAACGAGTG	163716

BX000470.24	351	CTGCCCCGCCCCCGCCTGCGCCTCCGGCCAAGCGGGCGCGGCGTTCACCT	400
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	163717	CTGCCCCGCCCCCGCCTGCGCCTCCGGCCAAGCGGGCGCGGCGTTCACCT	163766

BX000470.24	401	CGAAAGCAGGCAGCCCCTCCTGCCCAGGGCGCCGTTAAGTCCGGTAAACG	450
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	163767	CGAAAGCAGGCAGCCCCTCCTGCCCAGGGCGCCGTTAAGTCCGGTAAACG	163816

BX000470.24	451	GACCGCGAAGCGTCCCTGAGACAGGCCATCCGGAGAAGAGGAAACTTGCT	500
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	163817	GACCGCGAAGCGTCCCTGAGACAGGCCATCCGGAGAAGAGGAAACTTGCT	163866

BX000470.24	501	CTTTCCCCGCTGGAGGGCGGGGCCCCGATAACAACGGTACTTTTCAGTGC	550
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	163867	CTTTCCCCGCTGGAGGGCGGGGCCCCGATAACAACGGTACTTTTCAGTGC	163916

BX000470.24	551	CACCAAAACATCAGTAAAAGAGCACTTTTTCCCTTCCCCGGATGTGACTG	600
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	163917	CACCAAAACATCAGTAAAAGAGCACTTTTTCCCTTCCCCGGATGTGACTG	163966

BX000470.24	601	CACGAGTTCTGCCAGTCCGGGACGCGCTGCCTTCCGGCTCGCAGACTCTA	650
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	163967	CACGAGTTCTGCCAGTCCGGGACGCGCTGCCTTCCGGCTCGCAGACTCTA	164016

BX000470.24	651	CGTGCTTCGCCAGTGGCTCACGAGCGCTGGGGGGACGGTCTCCCTTCCCT	700
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	164017	CGTGCTTCGCCAGTGGCTCACGAGCGCTGGGGGGACGGTCTCCCTTCCCT	164066

BX000470.24	701	CAGCCCTCCAGCCCCCTCTCCGGAGTCAGGGTGCGGAGCCAGAGCGAATC	750
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	164067	CAGCCCTCCAGCCCCCTCTCCGGAGTCAGGGTGCGGAGCCAGAGCGAATC	164116

BX000470.24	751	GCTCTCCTCCAGCTTTTCCGCGGGACCCTCGTGCTTCCCGGATCAGCACA	800
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	164117	GCTCTCCTCCAGCTTTTCCGCGGGACCCTCGTGCTTCCCGGATCAGCACA	164166

BX000470.24	801	CCCACTCCGCGCTGCCCCACCGCTGGTACGTCAGCGATTGTAGCGATGAC	850
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	164167	CCCACTCCGCGCTGCCCCACCGCTGGTACGTCAGCGATTGTAGCGATGAC	164216

BX000470.24	851	TCCATTAGCGAGGGCTCTGCCTGCCTGGTTAGCGCGGGCCAGCCCCTCGC	900
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	164217	TCCATTAGCGAGGGCTCTGCCTGCCTGGTTAGCGCGGGCCAGCCCCTCGC	164266

BX000470.24	901	GGTGGCTCATACGCACAATCAGACTCGGTTACGCGATTCAGTTCGCGAAA	950
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	164267	GGTGGCTCATACGCACAATCAGACTCGGTTACGCGATTCAGTTCGCGAAA	164316

BX000470.24	951	CGGCCCCCCAAGTTTACGGGCGTGTATTTCTCCAGGGTCAACCCCCTGTC	1000
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	164317	CGGCCCCCCAAGTTTACGGGCGTGTATTTCTCCAGGGTCAACCCCCTGTC	164366

BX000470.24	1001	CGCCCCTGTCTTGCGAGAGGAGATTGCTGCCCTCCTGGCGAAGGGTGCAA	1050
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	164367	CGCCCCTGTCTTGCGAGAGGAGATTGCTGCCCTCCTGGCGAAGGGTGCAA	164416

BX000470.24	1051	TCGAGCCGGTTCCTCCAGCCGAGATGGAGAGTGGGTTTTACAGCCCATAC	1100
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	164417	TCGAGCCGGTTCCTCCAGCCGAGATGGAGAGTGGGTTTTACAGCCCATAC	164466

BX000470.24	1101	TTCATCGTACCCAAAAAGAGCGGTGGGTCACGGCCAATCCTAGATCTGCG	1150
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	164467	TTCATCGTACCCAAAAAGAGCGGTGGGTCACGGCCAATCCTAGATCTGCG	164516

BX000470.24	1151	CGTTTTGAACCGCTGTCTGCACAAGCTGCCGTTCAGAATGCTCACGCAGA	1200
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	164517	CGTTTTGAACCGCTGTCTGCACAAGCTGCCGTTCAGAATGCTCACGCAGA	164566

BX000470.24	1201	GGCGCATTCTCCAATGCGTTCGTCCTCGGGATTGGTTTGCAGCCATAGAC	1250
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	164567	GGCGCATTCTCCAATGCGTTCGTCCTCGGGATTGGTTTGCAGCCATAGAC	164616

BX000470.24	1251	CTGAAGGACGCGTATTTCCATGTCTCCATTCTTCCACGCCACCGCCAATT	1300
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	164617	CTGAAGGACGCGTATTTCCATGTCTCCATTCTTCCACGCCACCGCCAATT	164666

BX000470.24	1301	TCTGCGGTTTGCGTTCGAGGGTCGAGCGTGGCAGTACAAGGTCCTCCCCT	1350
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	164667	TCTGCGGTTTGCGTTCGAGGGTCGAGCGTGGCAGTACAAGGTCCTCCCCT	164716

BX000470.24	1351	TCGGGCTCTCTCTGTCTCCGCGGGTCTTCACCAAACTCGCGGAGGGTGCC	1400
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	164717	TCGGGCTCTCTCTGTCTCCGCGGGTCTTCACCAAACTCGCGGAGGGTGCC	164766

BX000470.24	1401	CTAGCGCCCCTTCGGCTCGCGGGCATTCGCATACTCAATTATCTCGACGA	1450
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	164767	CTAGCGCCCCTTCGGCTCGCGGGCATTCGCATACTCAATTATCTCGACGA	164816

BX000470.24	1451	CTGGCTGATTTTAGCCCACTCGCGGGAGCAATTGATTATGCACAGGGACG	1500
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	164817	CTGGCTGATTTTAGCCCACTCGCGGGAGCAATTGATTATGCACAGGGACG	164866

BX000470.24	1501	AGGTGCTTCGGCATCTCCGCCTACTGGGGCTTCAGGTCAACCGAGAAAAG	1550
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	164867	AGGTGCTTCGGCATCTCCGCCTACTGGGGCTTCAGGTCAACCGAGAAAAG	164916

BX000470.24	1551	AGCAAACTCGCCCCCGTGCAGAGGATTTCTTTTCTCGGGATGGAGCTGGA	1600
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	164917	AGCAAACTCGCCCCCGTGCAGAGGATTTCTTTTCTCGGGATGGAGCTGGA	164966

BX000470.24	1601	CTCGATCACCATGGTAGCGCACCTCTCCGAGGAACGCGCTCGCCTGTTGC	1650
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	164967	CTCGATCACCATGGTAGCGCACCTCTCCGAGGAACGCGCTCGCCTGTTGC	165016

BX000470.24	1651	TGAACTGTCTGAGGGAGCTCGACAGCAAACTAGTGGTCCCACTGAAGTTC	1700
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	165017	TGAACTGTCTGAGGGAGCTCGACAGCAAACTAGTGGTCCCACTGAAGTTC	165066

BX000470.24	1701	TTTCAGAGGCTCCTGGGGCATATGGCATCCGCAGCCGCCGTCACGCCGCT	1750
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	165067	TTTCAGAGGCTCCTGGGGCATATGGCATCCGCAGCCGCCGTCACGCCGCT	165116

BX000470.24	1751	CGGGTTGCTCCATATGAGACCACTTCAGCACTGGCTTCACGATCGGGTCC	1800
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	165117	CGGGTTGCTCCATATGAGACCACTTCAGCACTGGCTTCACGATCGGGTCC	165166

BX000470.24	1801	CCAGACGCGCATGGCACGCGGGCACACACCGGGTCTCGGTTACTGCGCTG	1850
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	165167	CCAGACGCGCATGGCACGCGGGCACACACCGGGTCTCGGTTACTGCGCTG	165216

BX000470.24	1851	TGTCGCCGCGCCCTCAGCCCTTGGAACGACCCCTCGTTCCTACAGGCCGG	1900
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	165217	TGTCGCCGCGCCCTCAGCCCTTGGAACGACCCCTCGTTCCTACAGGCCGG	165266

BX000470.24	1901	TGTGCCTCTAGGACAGGCGTCCAGCCATGTTGTTGTTTCAACAGACGCTT	1950
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	165267	TGTGCCTCTAGGACAGGCGTCCAGCCATGTTGTTGTTTCAACAGACGCTT	165316

BX000470.24	1951	CCAACACGGGTTGGGGGGCCGTGTGTCGCGGGCATGCGGCTGCGGGCCTC	2000
			||||||||||||||||||||||||||||||||||||||||||||||||||
BX537295.7	165317	CCAACACGGGTTGGGGGGCCGTGTGTCGCGGGCATGCGGCTGCGGGCCTC	165366

Overview

Query
BX000470.24 - 237809 bps
Hit
BX537295.7 - 165366 bps
Total alignments
20
Best alignment
alignment #1 (HSP: 2000 bps)
Best alignment cartoon

Alternate alignments

#%IDscoreHSPstartendstrandhstarthendhstrand
1100195620001200011633671653661
286.711773412267152270551363439791
385.011723226852968850-124722250481
486.8200353143157143509-139023393781
588.051993256852368847139028393621
687.36186327198210198536-141251416061
786.66185335223931224265141255416061
889.32253483153631883141262416071
998.052402577045870714162340625961
1088.21983283154831875-167579679001
1184.92163355198217198571167579679561
1291.351902677045970725172279725441
1378.162771012166049167060-11009481019361
1485.9323952022650722702611152551157731
1587.0319236422669222705511464581468271
1684.5516735019820719855611589801593351
1798.2716417345344706-11619971621691
1895.5927893310837388704711620111653651
1990.32416612594946010511623541629731
2087.78161371610986246811639751653651
Short-link