<=>End overlap alignment

Alignment #1 HSP: 2144 bps / non-identical: 2800 bps

Full alignment

AL672185.7	1	GATCATATTCAGTGTTTTATTATTTCTGTAAT----TAATATTCCTGAAG	46
			||||||||||||||||||||||||||||||||    ||||||| ||||||
AL672164.13	65937	GATCATATTCAGTGTTTTATTATTTCTGTAATAAATTAATATTTCTGAAG	65986

AL672185.7	47	ATCATATTCAGTGTTTTATTATTTCTGT----AATTAATATTTCTGTAGA	92
			||||||||||||||||||||||||||||    |||||||||||||| |||
AL672164.13	65987	ATCATATTCAGTGTTTTATTATTTCTGTAATAAATTAATATTTCTGAAGA	66036

AL672185.7	93	TCATATTCAGTGTTTTATTATTTCTGTAATTTATATTTCTGAAGATCATA	142
			|||||||||||||||||||||||||||                       
AL672164.13	66037	TCATATTCAGTGTTTTATTATTTCTGT-----------------------	66063

AL672185.7	143	TTCAGTGTTTTTATTATTTCTGTGTCAAAATCAATATATTTTTCATCTAC	192
			                                                  
AL672164.13	66064	--------------------------------------------------	66063

AL672185.7	193	AATGATAATAAAGAAACTCAATGTCATTCTGCATGATGTCCCTTCACATG	242
			                                                  
AL672164.13	66064	--------------------------------------------------	66063

AL672185.7	243	TTTTCAGCTCATCTGAATCTTTCTCTACTCTGTATCAAACACAAAATGAT	292
			                                                  
AL672164.13	66064	--------------------------------------------------	66063

AL672185.7	293	TTTCTCTCTTTCACCAGAAAAAGCTGTGAATGATTTCTGCTACTGAGTTC	342
			                                                  
AL672164.13	66064	--------------------------------------------------	66063

AL672185.7	343	AATTTGTTGTGTTTTGATTAAACGGAAACTGAGCTGAACATCTCTGACAG	392
			                                                  
AL672164.13	66064	--------------------------------------------------	66063

AL672185.7	393	TCAAATGAATGATTTTCAGCTCAGAGGTAAGTTTATGGGCTTGATTTATT	442
			                                                  
AL672164.13	66064	--------------------------------------------------	66063

AL672185.7	443	TCGAAATGACTCAAAAACACAGAAAGCACATGTTTCTGACCATATATGGT	492
			                                                  
AL672164.13	66064	--------------------------------------------------	66063

AL672185.7	493	GTCGCTTCCTGAACGCTCCACCCAATAATCATCATCTCATGCAAATTAGC	542
			                                                  
AL672164.13	66064	--------------------------------------------------	66063

AL672185.7	543	AAAAGAGACCAGTCCAGCAATCATCTTTAACTGATTTATATATGCAGATG	592
			                                                  
AL672164.13	66064	--------------------------------------------------	66063

AL672185.7	593	AAACGACACTGATTGGCCGGTTGAATAAAACTGTAACAGAAGGAGAGATT	642
			                                                  
AL672164.13	66064	--------------------------------------------------	66063

AL672185.7	643	GTGTATTATACTTTTATAAATTTGCTTCAAAATTACCGTAAAAAGAGTTT	692
			                                                  
AL672164.13	66064	--------------------------------------------------	66063

AL672185.7	693	ATGAAGATCAATTTAAATAAAACCAAAGAAAATTTATGAATACTAGGAAC	742
			                                                  
AL672164.13	66064	--------------------------------------------------	66063

AL672185.7	743	AAACTAGAGTTTATTAACGGCTTTGAAGCTCAAATAAAGCAGGGGTGGCC	792
			                                                  
AL672164.13	66064	--------------------------------------------------	66063

AL672185.7	793	AACCCTGTTCCTGGAGAGCCACCTTCTTGCAGATTTCAGTTGCAACCCAT	842
			                                                  
AL672164.13	66064	--------------------------------------------------	66063

AL672185.7	843	ATCAAACACACCTGCCTGTAATTATGACGTGGTGTTCAGGTCCTAATTAA	892
			                                                  
AL672164.13	66064	--------------------------------------------------	66063

AL672185.7	893	TTGGTTCAGGTGTGTTTGATATGAGTAGCTACTGAAATCTGCATGAAGGT	942
			                                                  
AL672164.13	66064	--------------------------------------------------	66063

AL672185.7	943	GGCTCTCCAGGAACAGGGTTGGCCAGCCCTAAAATAGACGATGTTGGAAA	992
			           || ||  |    |         | |    ||   |||  
AL672164.13	66064	-------GTTAAATAGTTTGAAGCTTGTGATGGACATCAAATAGAGGATG	66106

AL672185.7	993	ATGTAAATATTTGATTGATAATAAATTGAGAATTGCTTTGATAGAATATT	1042
			 || ||   ||  ||   | ||  ||    |||||   |        | |
AL672164.13	66107	TTGGAAGATTTCAATATTTTATTGATGATAAATTGGGATTTGCTGCAAAT	66156

AL672185.7	1043	AAAGAATAAATTTAATAAAGAGCAAAGCTGAGATTATTTCTTATTAGGAT	1092
			  |||||| ||| |||||| | |||||| |||||||||||||||||||||
AL672164.13	66157	GTAGAATATATTCAATAAAAACCAAAGCAGAGATTATTTCTTATTAGGAT	66206

AL672185.7	1093	GTTTCAA-------------------------------------------	1099
			|||||||                                           
AL672164.13	66207	GTTTCAAGTCAATGTATTTTAGAGATGATTTATAGGAATTTAGTTAGGAG	66256

AL672185.7	1100	--------------------------------------------------	1099
			                                                  
AL672164.13	66257	TTTTGTGTGTTTTAAAAGCAGGAAAATCACAAAGAGAAATAAATGAGATT	66306

AL672185.7	1100	--------------------------------------------------	1099
			                                                  
AL672164.13	66307	TAATAGATAATAAATAAACAGAATCAAATCATAATTGAAGATTTGTTCGC	66356

AL672185.7	1100	--------------------------------------------------	1099
			                                                  
AL672164.13	66357	ATTAGGGCTGCACGATATTGAAAAAAATCTAACATTGCAATTTTTTTAAT	66406

AL672185.7	1100	--------------------------------------------------	1099
			                                                  
AL672164.13	66407	TCTGTGATGTATATTGAGATATGAATACAAGAGGAGTTGAATAACTATTT	66456

AL672185.7	1100	--------------------------------------------------	1099
			                                                  
AL672164.13	66457	GGAAAGAATCTTATTTTTAGATTGGTTTGGATGATTCTGTAGGGGAGTCT	66506

AL672185.7	1100	--------------------------------------------------	1099
			                                                  
AL672164.13	66507	ATAACATGTAATAAACAATCTACAAGCATAGATAAATACAATAAACAAAA	66556

AL672185.7	1100	--------------------------------------------------	1099
			                                                  
AL672164.13	66557	AGGTACAAATTAAATAAACAGTGTTTTATTGTTTTCCTGAGGAGTCGAAC	66606

AL672185.7	1100	--------------------------------------------------	1099
			                                                  
AL672164.13	66607	TGTATTCAGGTGTACAGTAATTGAATAATCAAGTGCAAATTAATACTGCA	66656

AL672185.7	1100	--------------------------------------------------	1099
			                                                  
AL672164.13	66657	TAGTCTTCATTTAATAAACAATTCAATAAAATTAATCGTTAATTTGTTAC	66706

AL672185.7	1100	-----------------------------CACTTTTTTGTGAGTTGATGT	1120
			                               ||||  | | |        
AL672164.13	66707	AAAAGGTAACAAGTTACAAACGGTTAAATTTCTTTGCTTTTAAAATCCTC	66756

AL672185.7	1121	ATTTTGGAGATGCCTGAAAAGAGTTTGGTTGAGAGTTGTGTGTGTTTTAA	1170
			|    |     | |   ||  |         | |        | |  |  
AL672164.13	66757	ACACAGTCACAGGCCTCAAGAAACACTTGCTAAATGATCAGTTATAATCC	66806

AL672185.7	1171	CATTAATTATTACTGTTAACATATTACTATTATTGACTATTAAAGCAAAT	1220
			          |   ||   |     |      |  |  |    |  | ||
AL672164.13	66807	AGACTCAACATTGCGTATGCTCGCGATGTGACTATAGCAAATGACAACAT	66856

AL672185.7	1221	TGTGTGTTGAGGAGTAAAAATCAGCAGTGTAATTGTATGAAAACCAAAAA	1270
			|| |   |      | |||      | |||       | |   ||  |||
AL672164.13	66857	TGCGATATCGATGCTGAAACGATATATTGTGCAGCCCTTATTCCCGTAAA	66906

AL672185.7	1271	GAGAATATTTCAGCTTTTGCTATCAAAAAGACGTTTAAGGGAACCTGGAG	1320
			 | || |||||||||| ||| || |||||||| ||| ||| |||||||||
AL672164.13	66907	TAAAACATTTCAGCTTCTGCCATTAAAAAGACATTTCAGGAAACCTGGAG	66956

AL672185.7	1321	TCAGGATAAATGTGTGTTTAATGTGATTTGTGCTGATATGAAACACTGAG	1370
			|||||||||||||||||| ||||||||||||| ||| ||||||| ||| |
AL672164.13	66957	TCAGGATAAATGTGTGTTAAATGTGATTTGTGTTGAAATGAAACGCTGGG	67006

AL672185.7	1371	CTGTTAGTTTGAGTAAAGAGTGGATTGTGTTGTTTTTAATGTGATTTGTG	1420
			 |      ||||||||||| || |||||||||||||||||||||||||||
AL672164.13	67007	AT------TTGAGTAAAGACTGAATTGTGTTGTTTTTAATGTGATTTGTG	67050

AL672185.7	1421	TGATGTTGAATGTGTTTGTGTTACTGCTTCTGTTTTTATGTGACGTGTGT	1470
			| ||  |||||||||||||||| |||||| ||||||||||||||||||||
AL672164.13	67051	TCATTATGAATGTGTTTGTGTTGCTGCTTGTGTTTTTATGTGACGTGTGT	67100

AL672185.7	1471	GAGGATGTTGACTGTAATTAATTCTGTGGTGAGAATAAAGACAGACTGAC	1520
			||||||||||| ||| ||||||||||||||||||||||||||||| ||||
AL672164.13	67101	GAGGATGTTGAGTGTGATTAATTCTGTGGTGAGAATAAAGACAGATTGAC	67150

AL672185.7	1521	ATTATTTGTGGATAATAAAGAGAGTCAGAGTCTGTATAGTCTGTGCTGAT	1570
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL672164.13	67151	ATTATTTGTGGATAATAAAGAGAGTCAGAGTCTGTATAGTCTGTGCTGAT	67200

AL672185.7	1571	AGTCTGTTGGTCACTGCAGATAATATCGAGCCAACGA-------------	1607
			|||||||||||||||||||||| |||  |||||||||             
AL672164.13	67201	AGTCTGTTGGTCACTGCAGATATTATTAAGCCAACGAGATTCAGGCGTCC	67250

AL672185.7	1608	--------------------------------------------------	1607
			                                                  
AL672164.13	67251	TGAGTTTGAGCCTCTGTTTGTGCAGCTTTCCTCATAGATATATACCGTAG	67300

AL672185.7	1608	--------------------------------------------------	1607
			                                                  
AL672164.13	67301	ATATCGCATACAGGCCCTGAGCATGCATCAATATCGCCACCATACTGGTA	67350

AL672185.7	1608	--------------------------------------------------	1607
			                                                  
AL672164.13	67351	CAGTACTCCCAGGACAAAAGTCATTCAACCACACTTAATCAAGACCAAAG	67400

AL672185.7	1608	----------------------------------TTAAGTCGTCCCGAGT	1623
			                                                  
AL672164.13	67401	CCAATCTGAAGATGCCAGATATTTGCACTGCGTACAGGTGTAGTAACGAA	67450

AL672185.7	1624	TCGAGTCCAGGATCGCAGAGTTTTCCTGTTGCTGTATATCTTCTCTCTCT	1673
			|  |    |  |   |  ||  |    |        |      ||     
AL672164.13	67451	TGAACAAAAAAAAAACTAAGGATAAAGGCATAACGTTCATAGGTCAAATG	67500

AL672185.7	1674	CCCTCTAACATCACTTCCTGTCTAGTTACTGTCCTGTCAATTAAAGCCAA	1723
			   | |    |       | | |    |   |           |||  | 
AL672164.13	67501	TAGTATTTTTTATGAATTTATGTTACAAAATTATGTGATCAACAAGTAAC	67550

AL672185.7	1724	AAACTATTTAAATAAAAACCAATTCAATATAAAGCAGCTGCATGCAAAAT	1773
			    |   |      | |   ||| | |              |  |    
AL672164.13	67551	CTTATTGATGTTATTACAGTCATTTACTGCTTTAGCATGAGGTAAAGTGG	67600

AL672185.7	1774	GAGGCACAAAACATCTGGAAAAATCTTAAAGTCCGCATGAACCAGAAGCT	1823
			 |   ||      |    |  || ||||||         | |   ||   
AL672164.13	67601	CACCAACTTGCACTAAATACTAAGCTTAAATCTGCATGAATCGGAAACTG	67650

AL672185.7	1824	GCGACCCTGTTTTTTTTTCATACTGTGAAGCAGTTCATAGAGAAACTAAA	1873
			       | || ||| ||| || ||||| |||| || |||||||||||||
AL672164.13	67651	CGACTGTTTTTATTTATTCGTATTGTGATGCAGCTCCTAGAGAAACTAAA	67700

AL672185.7	1874	TATAAAAGGAGACAACAGTGGGTGTGGCTTGTTTCTTCTACTGCGAGCTG	1923
			||| ||| |||| ||||||||| ||||||| ||  |||||||||||||||
AL672164.13	67701	TATTAAATGAGAAAACAGTGGGCGTGGCTTTTTGTTTCTACTGCGAGCTG	67750

AL672185.7	1924	ATTGGATGTAGTAAAGTAGGCATTTCATT-----CAGAAGGGAGAGTTAT	1968
			|||||||||||||||| ||| ||| ||||         || || |    |
AL672164.13	67751	ATTGGATGTAGTAAAGCAGGTATTCCATTACGAAAGACAGAGAAAAGGGT	67800

AL672185.7	1969	TACATCCTAACACACTCCTTCACCTCCTTGCCATTTAAGTTTGTCATCAT	2018
			|       |       |   |        |     |     |    ||  
AL672164.13	67801	TTGGGTGGAGTTATTACAACCTAACAGACGTTTCCTCCTCATTATTTCTG	67850

AL672185.7	2019	AGCGCCTTCAAAACTGACAGCTAGAGGGGCGTGGTTAAGTATGTTAGCCA	2068
			  |||  ||||| |||| ||||  ||||||||||||||||| ||||||||
AL672164.13	67851	TTCGCTGTCAAAGCTGATAGCTGAAGGGGCGTGGTTAAGTAAGTTAGCCA	67900

AL672185.7	2069	CGCCCAATATCTCAGGCCGACGTAATCTGAGAATTTAACTGAAAACAAAC	2118
			 |||||||| |||||            |||||||||||||||||||||||
AL672164.13	67901	TGCCCAATACCTCAG------------TGAGAATTTAACTGAAAACAAAC	67938

AL672185.7	2119	AGGAAGTGCATTTTCAGATTTCAATT	2144
			||||||||||||||||||||||||||
AL672164.13	67939	AGGAAGTGCATTTTCAGATTTCAATT	67964

Compact alignment

AL672185.7	1	GATCATATTCAGTGTTTTATTATTTCTGTAAT----TAATATTCCTGAAG	46
			||||||||||||||||||||||||||||||||    ||||||| ||||||
AL672164.13	65937	GATCATATTCAGTGTTTTATTATTTCTGTAATAAATTAATATTTCTGAAG	65986

AL672185.7	47	ATCATATTCAGTGTTTTATTATTTCTGT----AATTAATATTTCTGTAGA	92
			||||||||||||||||||||||||||||    |||||||||||||| |||
AL672164.13	65987	ATCATATTCAGTGTTTTATTATTTCTGTAATAAATTAATATTTCTGAAGA	66036

AL672185.7	93	TCATATTCAGTGTTTTATTATTTCTGTAATTTATATTTCTGAAGATCATA	142
			|||||||||||||||||||||||||||                       
AL672164.13	66037	TCATATTCAGTGTTTTATTATTTCTGT-----------------------	66063

AL672185.7	143	TTCAGTGTTTTTATTATTTCTGTGTCAAAATCAATATATTTTTCATCTAC	192
			                                                  
AL672164.13	66064	--------------------------------------------------	66063

AL672185.7	193	AATGATAATAAAGAAACTCAATGTCATTCTGCATGATGTCCCTTCACATG	242
			                                                  
AL672164.13	66064	--------------------------------------------------	66063

AL672185.7	243	TTTTCAGCTCATCTGAATCTTTCTCTACTCTGTATCAAACACAAAATGAT	292
			                                                  
AL672164.13	66064	--------------------------------------------------	66063

AL672185.7	293	TTTCTCTCTTTCACCAGAAAAAGCTGTGAATGATTTCTGCTACTGAGTTC	342
			                                                  
AL672164.13	66064	--------------------------------------------------	66063

AL672185.7	343	AATTTGTTGTGTTTTGATTAAACGGAAACTGAGCTGAACATCTCTGACAG	392
			                                                  
AL672164.13	66064	--------------------------------------------------	66063

AL672185.7	393	TCAAATGAATGATTTTCAGCTCAGAGGTAAGTTTATGGGCTTGATTTATT	442
			                                                  
AL672164.13	66064	--------------------------------------------------	66063

AL672185.7	443	TCGAAATGACTCAAAAACACAGAAAGCACATGTTTCTGACCATATATGGT	492
			                                                  
AL672164.13	66064	--------------------------------------------------	66063

AL672185.7	493	GTCGCTTCCTGAACGCTCCACCCAATAATCATCATCTCATGCAAATTAGC	542
			                                                  
AL672164.13	66064	--------------------------------------------------	66063

AL672185.7	543	AAAAGAGACCAGTCCAGCAATCATCTTTAACTGATTTATATATGCAGATG	592
			                                                  
AL672164.13	66064	--------------------------------------------------	66063

AL672185.7	593	AAACGACACTGATTGGCCGGTTGAATAAAACTGTAACAGAAGGAGAGATT	642
			                                                  
AL672164.13	66064	--------------------------------------------------	66063

AL672185.7	643	GTGTATTATACTTTTATAAATTTGCTTCAAAATTACCGTAAAAAGAGTTT	692
			                                                  
AL672164.13	66064	--------------------------------------------------	66063

AL672185.7	693	ATGAAGATCAATTTAAATAAAACCAAAGAAAATTTATGAATACTAGGAAC	742
			                                                  
AL672164.13	66064	--------------------------------------------------	66063

AL672185.7	743	AAACTAGAGTTTATTAACGGCTTTGAAGCTCAAATAAAGCAGGGGTGGCC	792
			                                                  
AL672164.13	66064	--------------------------------------------------	66063

AL672185.7	793	AACCCTGTTCCTGGAGAGCCACCTTCTTGCAGATTTCAGTTGCAACCCAT	842
			                                                  
AL672164.13	66064	--------------------------------------------------	66063

AL672185.7	843	ATCAAACACACCTGCCTGTAATTATGACGTGGTGTTCAGGTCCTAATTAA	892
			                                                  
AL672164.13	66064	--------------------------------------------------	66063

AL672185.7	893	TTGGTTCAGGTGTGTTTGATATGAGTAGCTACTGAAATCTGCATGAAGGT	942
			                                                  
AL672164.13	66064	--------------------------------------------------	66063

AL672185.7	943	GGCTCTCCAGGAACAGGGTTGGCCAGCCCTAAAATAGACGATGTTGGAAA	992
			           || ||  |    |         | |    ||   |||  
AL672164.13	66064	-------GTTAAATAGTTTGAAGCTTGTGATGGACATCAAATAGAGGATG	66106

AL672185.7	993	ATGTAAATATTTGATTGATAATAAATTGAGAATTGCTTTGATAGAATATT	1042
			 || ||   ||  ||   | ||  ||    |||||   |        | |
AL672164.13	66107	TTGGAAGATTTCAATATTTTATTGATGATAAATTGGGATTTGCTGCAAAT	66156

AL672185.7	1043	AAAGAATAAATTTAATAAAGAGCAAAGCTGAGATTATTTCTTATTAGGAT	1092
			  |||||| ||| |||||| | |||||| |||||||||||||||||||||
AL672164.13	66157	GTAGAATATATTCAATAAAAACCAAAGCAGAGATTATTTCTTATTAGGAT	66206

AL672185.7	1093	GTTTCAA-------------------------------------------	1099
			|||||||                                           
AL672164.13	66207	GTTTCAAGTCAATGTATTTTAGAGATGATTTATAGGAATTTAGTTAGGAG	66256

AL672185.7	1100	--------------------------------------------------	1099
			                                                  
AL672164.13	66257	TTTTGTGTGTTTTAAAAGCAGGAAAATCACAAAGAGAAATAAATGAGATT	66306

AL672185.7	1100	--------------------------------------------------	1099
			                                                  
AL672164.13	66307	TAATAGATAATAAATAAACAGAATCAAATCATAATTGAAGATTTGTTCGC	66356

AL672185.7	1100	--------------------------------------------------	1099
			                                                  
AL672164.13	66357	ATTAGGGCTGCACGATATTGAAAAAAATCTAACATTGCAATTTTTTTAAT	66406

AL672185.7	1100	--------------------------------------------------	1099
			                                                  
AL672164.13	66407	TCTGTGATGTATATTGAGATATGAATACAAGAGGAGTTGAATAACTATTT	66456

AL672185.7	1100	--------------------------------------------------	1099
			                                                  
AL672164.13	66457	GGAAAGAATCTTATTTTTAGATTGGTTTGGATGATTCTGTAGGGGAGTCT	66506

AL672185.7	1100	--------------------------------------------------	1099
			                                                  
AL672164.13	66507	ATAACATGTAATAAACAATCTACAAGCATAGATAAATACAATAAACAAAA	66556

AL672185.7	1100	--------------------------------------------------	1099
			                                                  
AL672164.13	66557	AGGTACAAATTAAATAAACAGTGTTTTATTGTTTTCCTGAGGAGTCGAAC	66606

AL672185.7	1100	--------------------------------------------------	1099
			                                                  
AL672164.13	66607	TGTATTCAGGTGTACAGTAATTGAATAATCAAGTGCAAATTAATACTGCA	66656

AL672185.7	1100	--------------------------------------------------	1099
			                                                  
AL672164.13	66657	TAGTCTTCATTTAATAAACAATTCAATAAAATTAATCGTTAATTTGTTAC	66706

AL672185.7	1100	-----------------------------CACTTTTTTGTGAGTTGATGT	1120
			                               ||||  | | |        
AL672164.13	66707	AAAAGGTAACAAGTTACAAACGGTTAAATTTCTTTGCTTTTAAAATCCTC	66756

AL672185.7	1121	ATTTTGGAGATGCCTGAAAAGAGTTTGGTTGAGAGTTGTGTGTGTTTTAA	1170
			|    |     | |   ||  |         | |        | |  |  
AL672164.13	66757	ACACAGTCACAGGCCTCAAGAAACACTTGCTAAATGATCAGTTATAATCC	66806

AL672185.7	1171	CATTAATTATTACTGTTAACATATTACTATTATTGACTATTAAAGCAAAT	1220
			          |   ||   |     |      |  |  |    |  | ||
AL672164.13	66807	AGACTCAACATTGCGTATGCTCGCGATGTGACTATAGCAAATGACAACAT	66856

AL672185.7	1221	TGTGTGTTGAGGAGTAAAAATCAGCAGTGTAATTGTATGAAAACCAAAAA	1270
			|| |   |      | |||      | |||       | |   ||  |||
AL672164.13	66857	TGCGATATCGATGCTGAAACGATATATTGTGCAGCCCTTATTCCCGTAAA	66906

AL672185.7	1271	GAGAATATTTCAGCTTTTGCTATCAAAAAGACGTTTAAGGGAACCTGGAG	1320
			 | || |||||||||| ||| || |||||||| ||| ||| |||||||||
AL672164.13	66907	TAAAACATTTCAGCTTCTGCCATTAAAAAGACATTTCAGGAAACCTGGAG	66956

AL672185.7	1321	TCAGGATAAATGTGTGTTTAATGTGATTTGTGCTGATATGAAACACTGAG	1370
			|||||||||||||||||| ||||||||||||| ||| ||||||| ||| |
AL672164.13	66957	TCAGGATAAATGTGTGTTAAATGTGATTTGTGTTGAAATGAAACGCTGGG	67006

AL672185.7	1371	CTGTTAGTTTGAGTAAAGAGTGGATTGTGTTGTTTTTAATGTGATTTGTG	1420
			 |      ||||||||||| || |||||||||||||||||||||||||||
AL672164.13	67007	AT------TTGAGTAAAGACTGAATTGTGTTGTTTTTAATGTGATTTGTG	67050

AL672185.7	1421	TGATGTTGAATGTGTTTGTGTTACTGCTTCTGTTTTTATGTGACGTGTGT	1470
			| ||  |||||||||||||||| |||||| ||||||||||||||||||||
AL672164.13	67051	TCATTATGAATGTGTTTGTGTTGCTGCTTGTGTTTTTATGTGACGTGTGT	67100

AL672185.7	1471	GAGGATGTTGACTGTAATTAATTCTGTGGTGAGAATAAAGACAGACTGAC	1520
			||||||||||| ||| ||||||||||||||||||||||||||||| ||||
AL672164.13	67101	GAGGATGTTGAGTGTGATTAATTCTGTGGTGAGAATAAAGACAGATTGAC	67150

skip 50 bps 100% identity alignment

AL672185.7	1571	AGTCTGTTGGTCACTGCAGATAATATCGAGCCAACGA-------------	1607
			|||||||||||||||||||||| |||  |||||||||             
AL672164.13	67201	AGTCTGTTGGTCACTGCAGATATTATTAAGCCAACGAGATTCAGGCGTCC	67250

AL672185.7	1608	--------------------------------------------------	1607
			                                                  
AL672164.13	67251	TGAGTTTGAGCCTCTGTTTGTGCAGCTTTCCTCATAGATATATACCGTAG	67300

AL672185.7	1608	--------------------------------------------------	1607
			                                                  
AL672164.13	67301	ATATCGCATACAGGCCCTGAGCATGCATCAATATCGCCACCATACTGGTA	67350

AL672185.7	1608	--------------------------------------------------	1607
			                                                  
AL672164.13	67351	CAGTACTCCCAGGACAAAAGTCATTCAACCACACTTAATCAAGACCAAAG	67400

AL672185.7	1608	----------------------------------TTAAGTCGTCCCGAGT	1623
			                                                  
AL672164.13	67401	CCAATCTGAAGATGCCAGATATTTGCACTGCGTACAGGTGTAGTAACGAA	67450

AL672185.7	1624	TCGAGTCCAGGATCGCAGAGTTTTCCTGTTGCTGTATATCTTCTCTCTCT	1673
			|  |    |  |   |  ||  |    |        |      ||     
AL672164.13	67451	TGAACAAAAAAAAAACTAAGGATAAAGGCATAACGTTCATAGGTCAAATG	67500

AL672185.7	1674	CCCTCTAACATCACTTCCTGTCTAGTTACTGTCCTGTCAATTAAAGCCAA	1723
			   | |    |       | | |    |   |           |||  | 
AL672164.13	67501	TAGTATTTTTTATGAATTTATGTTACAAAATTATGTGATCAACAAGTAAC	67550

AL672185.7	1724	AAACTATTTAAATAAAAACCAATTCAATATAAAGCAGCTGCATGCAAAAT	1773
			    |   |      | |   ||| | |              |  |    
AL672164.13	67551	CTTATTGATGTTATTACAGTCATTTACTGCTTTAGCATGAGGTAAAGTGG	67600

AL672185.7	1774	GAGGCACAAAACATCTGGAAAAATCTTAAAGTCCGCATGAACCAGAAGCT	1823
			 |   ||      |    |  || ||||||         | |   ||   
AL672164.13	67601	CACCAACTTGCACTAAATACTAAGCTTAAATCTGCATGAATCGGAAACTG	67650

AL672185.7	1824	GCGACCCTGTTTTTTTTTCATACTGTGAAGCAGTTCATAGAGAAACTAAA	1873
			       | || ||| ||| || ||||| |||| || |||||||||||||
AL672164.13	67651	CGACTGTTTTTATTTATTCGTATTGTGATGCAGCTCCTAGAGAAACTAAA	67700

AL672185.7	1874	TATAAAAGGAGACAACAGTGGGTGTGGCTTGTTTCTTCTACTGCGAGCTG	1923
			||| ||| |||| ||||||||| ||||||| ||  |||||||||||||||
AL672164.13	67701	TATTAAATGAGAAAACAGTGGGCGTGGCTTTTTGTTTCTACTGCGAGCTG	67750

AL672185.7	1924	ATTGGATGTAGTAAAGTAGGCATTTCATT-----CAGAAGGGAGAGTTAT	1968
			|||||||||||||||| ||| ||| ||||         || || |    |
AL672164.13	67751	ATTGGATGTAGTAAAGCAGGTATTCCATTACGAAAGACAGAGAAAAGGGT	67800

AL672185.7	1969	TACATCCTAACACACTCCTTCACCTCCTTGCCATTTAAGTTTGTCATCAT	2018
			|       |       |   |        |     |     |    ||  
AL672164.13	67801	TTGGGTGGAGTTATTACAACCTAACAGACGTTTCCTCCTCATTATTTCTG	67850

AL672185.7	2019	AGCGCCTTCAAAACTGACAGCTAGAGGGGCGTGGTTAAGTATGTTAGCCA	2068
			  |||  ||||| |||| ||||  ||||||||||||||||| ||||||||
AL672164.13	67851	TTCGCTGTCAAAGCTGATAGCTGAAGGGGCGTGGTTAAGTAAGTTAGCCA	67900

AL672185.7	2069	CGCCCAATATCTCAGGCCGACGTAATCTGAGAATTTAACTGAAAACAAAC	2118
			 |||||||| |||||            |||||||||||||||||||||||
AL672164.13	67901	TGCCCAATACCTCAG------------TGAGAATTTAACTGAAAACAAAC	67938

skip 26 bps 100% identity alignment

Overview

Query
AL672185.7 - 47697 bps
Hit
AL672164.13 - 68035 bps
Total alignments
21
Best alignment
alignment #1 (HSP: 2144 bps)
Best alignment cartoon

Alternate alignments

#%IDscoreHSPstartendstrandhstarthendhstrand
163.890214412144165937679641
299.21955211354787590165926680351
381.61313343725837591-113301136261
494.59911114425144361118814189241
589.342643944463745030120288206811
693.6874953000830102126586266801
791.281261723900739178127195273661
887.342904694463845106-138385388501
981.631413392977430112-146293466241
1076.741143223676937090-146294466241
1185.31951772992930105-146671468471
1278.94872362989930134146957471841
1380.4901893692537113146981471841
1481.61954633262533087-152518530061
1586.92246474976410237152540530211
1685.892044113718137591152597530071
1791.8686812003536936568-158805599951
1888.06831333459534727161894620271
1990.978013735171165926660691
2089.6622435212771628166913672601
2172.512142517982222167625680351
Short-link