<=>End overlap alignment

Alignment #1 HSP: 100 bps / non-identical: 50 bps

Full alignment

AL589746.11	1	AAAAATCAACTCAAAGTAGATTGTAGACCTAAGCAAACCTGAGGGTAGGC	50
			||||||||||||| ||||||||||||||||||||||||||||||||||||
AL139246.21	154637	AAAAATCAACTCACAGTAGATTGTAGACCTAAGCAAACCTGAGGGTAGGC	154686

AL589746.11	51	AAAGAGTTCTTTAGCAGAACACAAAGAATACTAACCACGAAGAAGAGATC	100
			||||||||||||||||||||||||||||||||||||||||||||||||||
AL139246.21	154687	AAAGAGTTCTTTAGCAGAACACAAAGAATACTAACCACGAAGAAGAGATC	154736

Compact alignment

AL589746.11	1	AAAAATCAACTCAAAGTAGATTGTAGACCTAAGCAAACCTGAGGGTAGGC	50
			||||||||||||| ||||||||||||||||||||||||||||||||||||
AL139246.21	154637	AAAAATCAACTCACAGTAGATTGTAGACCTAAGCAAACCTGAGGGTAGGC	154686

skip 50 bps 100% identity alignment

Overview

Query
AL589746.11 - 23910 bps
Hit
AL139246.21 - 154736 bps
Total alignments
1
Best alignment
alignment #1 (HSP: 100 bps)
Best alignment cartoon

Alternate alignments

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