<=>End overlap alignment

Alignment #1 HSP: 132 bps / non-identical: 132 bps

Full alignment

C  CU576539.1	2258	ATACTCCATCCGTCTCTAAATATAAGTAAATTTTACTTTTTAAGTTCATT	2209
			||||||| ||||| |||||||||||| ||||||||| ||||| |||||||
  AC147407.10	107351	ATACTCCCTCCGTTTCTAAATATAAGCAAATTTTACCTTTTAGGTTCATT	107400

C  CU576539.1	2208	CAATTAATGATGTATGTGGTTCATAATATAAACTACATACATTATTAATT	2159
			|||||||||||||||||||||||||| ||  ||||||||||| |||||||
  AC147407.10	107401	CAATTAATGATGTATGTGGTTCATAACATGGACTACATACATCATTAATT	107450

C  CU576539.1	2158	GAATGAATCTAAAAAATAAAATTTGCTTATAT	2127
			|||||||  |||||| ||||||||||||||||
  AC147407.10	107451	GAATGAACTTAAAAAGTAAAATTTGCTTATAT	107482

Overview

Query
CU576539.1 - 107262 bps
Hit
AC147407.10 - 115857 bps
Total alignments
5
Best alignment
alignment #1 (HSP: 132 bps)
Best alignment cartoon

Alternate alignments

#%IDscoreHSPstartendstrandhstarthendhstrand
190.918513221272258-11073511074821
297.4435395558555623127320273581
377.08863853592636310156033564291
476.7240311293785438982157702587881
590.15821322127225811073701075011
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