This is a Wellcome Trust-funded project to sequence the genome of an established virulent Australian isolate of B. bigemina obtained from The Tick Fever Research Centre of The Queensland Department of Primary Industries. The nuclear genome of B. bigemina is estimated to be 10 Mb in size, distributed over 4 chromosomes, and a whole genome shotgun sequencing approach (to 8-fold coverage) is being used, followed by assembly and finishing.
This project is a collaboration with Drs Peter Willadsen and Louise Jackson of CSIRO Livestock Industries, Australia.
It is hoped that comparisons between these sequence data and those of the related species Babesia bovis will provide insights into pathogenicity in bovine babesiosis. The Babesia bovis genome is currently being sequenced at The Institute for Genomic Research in collaboration with Washington State University.
Studies
WGS of Babesia bigemina Bond strain
Sample | Strain | Run Accession |
|---|---|---|
| BIG2 | Bond | ERR018877 |
| BIG2 | Bond | ERR018878 |
Study of antigenic variant gene repertoire of B. bigemina and B. bovis strains from distinct geographic locations
Sample | Strain | Run Accession |
|---|---|---|
| 300_BbiS3P_NoPCR | BbiS3P | ERR019279 |
| 300_BbiS3P_NoPCR | BbiS3P | ERR019281 |
| 300_BbiS3P_NoPCR | BbiS3P | ERR019280 |
| BbiPR_NoPCR | Puerto Rico | ERR019282 |
| BbiJG29_NoPCR | JG29 | ERR019283 |


