Streptococcus pneumoniae

Streptococcus pneumoniae (the pneumococcus) is a facultatively anaerobic Gram positive bacterium which normally resides harmlessly within the human nasopharynx but is a major cause of morbidity and mortality worldwide, causing diseases that range in severity from meningitis, septicaemia, and pneumonia to sinusitis and acute otitis media. Rates of carriage are highest in infants and the elderly and much lower in other adults.

Data Downloads

[Genome Research Limited]

The Sanger Institute has a program of activities focused on Streptococcus pneumoniae including reference genomes, comparative genomics, deep sequencing within lineages and capsule biosynthesis loci sequencing.


Projects

  • Sequencing of cps loci for 90 different serotypes.
  • Genome of a representative of the S. pneumoniaeSpain23F sequence type 81 lineage
  • Other reference genomes: INV104B (ST 227, serotype 1), INV200 (ST 9, serotype 14), OXC141 (ST 180, serotype 3), A45 (serotype 3)
  • Comparative genomics within ST180 (strains 03_4156, 03_4183, 07_2838, 99_4038, 99_4039, 02_1198).
  • Comparative genomics within serotype 1 (strains P1041, INV104B, 03_2672, 03_3038, 06_1370, NCTC7465)
  • Deep sequencing within S. pneumoniaeSpain23F sequence type 81 lineage (200+ isolates)
  • Repeat sequence analysis; annotation software can be downloaded here


Collaborators (in no particular order)

Brian Spratt, Imperial College, UK

Tim Mitchell, University of Glasgow, UK

Peter Andrew, University of Leicester, UK

Keith Klugman, Emory University, USA

Anne von Gottburg, NICD, South Africa

Lesley McGee, CDC, USA

Kwan Soo Ko, ARFID, South Korea

Steve Baker, OUCRU, Vietnam

Lotte Lambertsen, SSI, Denmark

Mark van der Linden, NRCS, Germany

Bruno Pichon, HPA, UK

Bill Hanage, Imperial College, UK

Margit Kaltoft, Streptococcus Unit, Statens Serum Institut, Denmark


Funding

This work has been funded by the Wellcome Trust and World Health Organisation

Published Genome Data

Published Sequence

S. pneumoniae type 23F (Spanish 23F-1), is a multiple antibiotic resistant pandemic strain. The genome has a size of 2,221,315 bp and was sequenced in collaboration with in collaboration with Prof. Tim Mitchell of the Division of Infection and Immunity, Institute of Biomedical and Life Sciences, University of Glasgow, and Prof. Peter William Andrew of the Department of Microbiology and Immunology, Univesity of Leicester. The fully annotated genome is available from the EMBL/GenBank databases with accession number FM211187.

The genomes of strains INV104B (ST 227, serotype 1), INV200 (ST 9, serotype 14) and OXC141 (ST 180, serotype 3) are fully sequenced, annotated and published. The fully annotated genomes are available from the EMBL/GenBank databases with accession numbers FQ312030, FQ312029 and FQ312027 respectively.

Shotgun and assembly data from these projects are also available from our ftp site.

The genome of strain SPNA45 is fully sequenced, annotated and published. The fully annotated genome is available from the EMBL/GenBank databases with accession number HE983624.

The fully assembled and published draft genomes of the following strains are also available from the EMBL/GenBank databases:

Assembled contigs of the following draft genomes have been published and made available from the EMBL/GenBank databases:

Capsular Polysaccharide Biosynthetic Clusters

The Sanger Institute was funded by The World Health Organisation to sequence each of the 90 capsular polysaccharide (cps) biosynthetic clusters of S. pneumoniae in collaboration with Prof. Brian Spratt of the Department of Infectious Disease Epidemiology, Faculty of Medicine, Imperial College, London and Dr. Margit Kaltoft of the Streptococcus Unit, Statens Serum Institut, Denmark.

Knowledge of the full complement of capsule sequences should be important for surveillance and vaccine research.

Each cps cluster was amplified by long-PCR using primers in the conserved flanking dexB and aliA as described in Jiang et al., and the PCR product sequenced by the shotgun technique. Sizes range from 13844 to 30298 bp.

All 90 sequences are finished, annotated and published. Sequences are available for searching on our Blast Server. Sequences and preliminary annotations are available for download from our FTP site.

Studies

Streptococcus pneumoniae transcriptomics

Sample

Strain

Run Accession

23F transcript 1aUnknownERR015602
23F_OD_0.8UnknownERR015601
23F_single_strdUnknownERR015608
23F_double_strdUnknownERR015604
23F_double_strdUnknownERR019278
99-4038UnknownERR019277
99-4038UnknownERR015605
99-4039UnknownERR019276
99-4039UnknownERR015606
4038_7_2UnknownERR015600
4038_7_2UnknownERR015603
4039_2UnknownERR015607
4039_2UnknownERR015599
4038_7_44038_7ERR220392
4039_44039ERR220393
TR1TR1ERR025176
TR2TR2ERR025180
TR3TR3ERR025181
TR4TR4ERR025182
TR5TR5ERR025183
TR7TR7ERR025184
TR8TR8ERR025185
TR9TR9ERR025186
TR10TR10ERR025187
TR11TR11ERR025177
TR12TR12ERR025178
TR13TR13ERR025179
TR14TR14ERR025807
TR15TR15ERR025811
TR17TR17ERR025812
TR18TR18ERR025813
TR19TR19ERR025814
TR20TR20ERR025815
TR22TR22ERR025816
TR24TR24ERR025817
TR25TR25ERR025818
TR26TR26ERR025808
TR27TR27ERR025809
TR29TR29ERR025810
TR31TR31ERR025189
TR32TR32ERR025193
TR33TR33ERR025194
TR34TR34ERR025195
TR35TR35ERR025196
TR36TR36ERR025197
TR37TR37ERR025198
TR38TR38ERR025199
TR39TR39ERR025200
TR42TR42ERR025190
TR43TR43ERR025191
TR44TR44ERR025192
TR45TR45ERR025202
TR46TR46ERR025206
TR47TR47ERR025207
TR48TR48ERR025208
TR49TR49ERR025209
TR50TR50ERR025210
TR51TR51ERR025211
TR52TR52ERR025212
TR53TR53ERR025213
TR54TR54ERR025203
TR55TR55ERR025204
TR56TR56ERR025205
TR57TR57ERR025215
TR60TR60ERR025219
TR61TR61ERR025220
TR62TR62ERR025221
TR63TR63ERR025222
TR64TR64ERR025223
TR65TR65ERR025224
TR66TR66ERR025225
TR68TR68ERR025226
TR69TR69ERR025216
TR70TR70ERR025217
TR71TR71ERR025218
TR72TR72ERR025228
TR73TR73ERR025232
TR74TR74ERR025233
TR76TR76ERR025234
TR77TR77ERR025235
TR78TR78ERR025236
TR79TR79ERR025237
TR80TR80ERR025238
TR81TR81ERR025239
TR83TR83ERR025229
TR85TR85ERR025230
TR86TR86ERR025231
TR87TR87ERR025241
TR88TR88ERR025245
TR89TR89ERR025246
TR90TR90ERR025247
TR91TR91ERR025248
TR93TR93ERR025249
TR94TR94ERR025250
TR95TR95ERR025251
TR96TR96ERR025252
TR98TR98ERR025242
TR99TR99ERR025243
TR100TR100ERR025244

Genetic diversity on Streptococcus pneumoniae in Malawi 1

Sample

Strain

Run Accession

C9471XC9471ERR018020
D38588XD38588ERR018024
C9536XC9536ERR018022
D37725XD37725ERR018023
D31621XD31621ERR018025
D33521XD33521ERR018026
D31870XD31870ERR018027
D27816XD27816ERR018028
C14940XC14940ERR018029
C14376XC14376ERR018030
D38094XD38094ERR018031
C14099XC14099ERR018021
C14132XC14132ERR018033
D25696XD25696ERR018037
C14560XC14560ERR018035
D26316XD26316ERR018036
C18673XC18673ERR018038
C18004XC18004ERR018039
C17622XC17622ERR018040
C16847XC16847ERR018041
C16000XC16000ERR018042
C15085XC15085ERR018043
C13215XC13215ERR018044
C13181XC13181ERR018034
D27551XD27551ERR018046
Malawi2718XMalawi2718ERR018050
Malawi3020XMalawi3020ERR018048
D41088XD41088ERR018049
Malawi2429XMalawi2429ERR018051
Malawi286XMalawi286ERR018052
D47367XD47367ERR018053
D47335XD47335ERR018054
D38612XD38612ERR018055
D47322XD47322ERR018056
D46184XD46184ERR018057
D43782XD43782ERR018047
Malawi4164XMalawi4164ERR018059
Malawi2858XMalawi2858ERR018063
Malawi4323XMalawi4323ERR018061
Malawi3854XMalawi3854ERR018062
Malawi2783XMalawi2783ERR018064
Malawi2714XMalawi2714ERR018065
Malawi2403XMalawi2403ERR018066
Malawi13XMalawi13ERR018067
Malawi7062XMalawi7062ERR018068
Malawi6955XMalawi6955ERR018069
Malawi6506XMalawi6506ERR018070
Malawi5162XMalawi5162ERR018060
Malawi4097XMalawi4097ERR018072
A37371XA37371ERR018076
Malawi6286XMalawi6286ERR018074
A41093XA41093ERR018075
A34964XA34964ERR018077
A35576XA35576ERR018078
A34798XA34798ERR018079
A33084XA33084ERR018080
A28426XA28426ERR018081
Malawi7095XMalawi7095ERR018082
Malawi6839XMalawi6839ERR018083
Malawi6427XMalawi6427ERR018073
A41626XA41626ERR018085
A35527XA35527ERR018089
A43327XA43327ERR018087
A37855XA37855ERR018088
A35070XA35070ERR018090
A30928XA30928ERR018091
A30338XA30338ERR018092
A29858XA29858ERR018093
A28899XA28899ERR018094
A16898XA16898ERR018095
A43874XA43874ERR018096
A42335XA42335ERR018086
A37532XA37532ERR018098
A49600XA49600ERR018102
A41880XA41880ERR018100
A50302XA50302ERR018101
A46444XA46444ERR018103
A25958XA25958ERR018104
B18037XB18037ERR018105
B17731XB17731ERR018106
B17447XB17447ERR018107
B16221XB16221ERR018108
A43382XA43382ERR018109
A42964XA42964ERR018099
C19944C19944ERR023373
C17205C17205ERR023375
A55084A55084ERR023376
A53969A53969ERR023377
A55122A55122ERR023378
D51578D51578ERR023379
B18416B18416ERR023380
C19609C19609ERR023381
D42952D42952ERR023382
B14360B14360ERR023374
C15256C15256ERR023384
D28531D28531ERR023387
C16611C16611ERR023388
C14249C14249ERR023389
D32406D32406ERR023390
B11955B11955ERR023391
D32252D32252ERR023392
C11020C11020ERR023393
A36633A36633ERR023394
C10310C10310ERR023385
C10322C10322ERR023386
A39247A39247ERR028396
A40807A40807ERR028399
A41267A41267ERR028400
A41312A41312ERR028401
A41543A41543ERR028402
A41722A41722ERR028403
A41848A41848ERR028404
A42000A42000ERR028405
A42174A42174ERR028406
A42190A42190ERR028397
B14721B14721ERR028398
B14767B14767ERR028408
B14935B14935ERR028411
B15143B15143ERR028412
B15188B15188ERR028413
B15249B15249ERR028414
C13420C13429ERR028415
C14215C14215ERR028416
D38023D38023ERR028417
D38834D38834ERR028418
B15300B15300ERR028409
B15818B15818ERR028410
B15901B15901ERR028420
B15976B15976ERR028423
B16032B16032ERR028424
B16392B16392ERR028425
B16827B16827ERR028426
B17333B17333ERR028427
B17790B17790ERR028428
D46329D46329ERR028429
D51526D51526ERR028430
A28640A28640ERR028421
A28816A28816ERR028422
A29037A29037ERR026611
A29101A29101ERR026614
A29167A29167ERR026615
A29943A29943ERR026616
A30277A30277ERR026617
A31131A31131ERR026618
B10027B10027ERR026619
B10365B10365ERR026620
B10622B10622ERR026621
B8823B8823ERR026612
B8923B8923ERR026613
B9186B9186ERR026623
B9399B9399ERR026626
B9437B9437ERR026627
B9521B9521ERR026628
B9615B9615ERR026629
B9734B9734ERR026630
D23780D23780ERR026631
D24847D24847ERR026632
D28166D28166ERR026633
A33054A33054ERR026624
A33075A33075ERR026625
A33308A33308ERR028432
A33813A33813ERR028435
A33888A33888ERR028436
A33922A33922ERR028437
A33973A33973ERR028438
A34030A34030ERR028439
A34045A34045ERR028440
A34292A34292ERR028441
A34562A34562ERR028442
A34568A34568ERR028433
A34594A34594ERR028434
A35279A35279ERR028444
A36652A36652ERR028446
A36780A36780ERR028447
A36949A36949ERR028448
A36985A36985ERR028449
B11223B11223ERR028450
B11467B11467ERR028451
B11505B11505ERR028452
B11855B11855ERR028453
B12589B12589ERR028445
B12658B12658ERR028455
C12480C12480ERR028457
C12797C12797ERR028458
C12879C12879ERR028459
D30625D30625ERR028460
D30716D30716ERR028461
D33275D33275ERR028462
D34296D34296ERR028463
D36051D36051ERR028464
A39048A39048ERR028456

Deep sequencing within the Streptococcus pneumoniae antibiotic resistant pandemic clone PMEN1

Sample

Strain

Run Accession

SB1SB1ERR019701
SB2SB2ERR019705
SB22SB22ERR019706
SB23SB23ERR019707
SB3SB3ERR019708
SB4SB4ERR019709
SB6SB6ERR019710
SB7SB7ERR019711
SB10SB10ERR019712
SB12SB12ERR019702
SB18SB18ERR019703
SB20SB20ERR019704
SB24SB24ERR016634
SB28SB28ERR016636
SB31SB31ERR016637
SB32SB32ERR016638
SB33SB33ERR016639
SB36SB36ERR016640
SB50SB50ERR016641
SB66SB66ERR016642
SB134SB134ERR016643
SB35SB35ERR016635
HKP1HKP1ERR016692
HKP38HKP38ERR016696
SI02SI02ERR016697
SIP12SIP12ERR016698
HKP57HKP57ERR016699
KHP58KHP58ERR016700
HKP65HKP65ERR016701
MalM6MalM6ERR016702
MalM12MalM12ERR016703
MalP4MalP4ERR016693
SIM1SIM1ERR016694
SI01SI01ERR016695
Th5Th5ERR016645
Th13Th13ERR016649
Kor910Kor910ERR016650
Kor28Kor28ERR016651
Th32Th32ERR016652
Th104Th104ERR016653
TWM30TWM30ERR016654
VNB15VNB15ERR016655
Kor14Kor14ERR016656
Kor16Kor16ERR016646
Kor906Kor906ERR016647
Kor909Kor909ERR016648
Kor82Kor82ERR016658
Kor136Kor136ERR016661
041244124ERR016662
Kor138Kor138ERR016663
Kor146Kor146ERR016664
Kor148Kor148ERR016665
070507050ERR016666
071177117ERR016667
08B12008B120ERR016668
040044004ERR016659
040364036ERR016660
McGee92McGee92ERR016670
McGee111McGee111ERR016672
McGee228McGee228ERR016673
McGee385McGee385ERR016674
McGee400McGee400ERR016675
McGee412McGee412ERR016676
McGee1590McGee1590ERR016677
McGee1788McGee1788ERR016678
McGee1789McGee1789ERR016679
McGee1842McGee1842ERR016671
McGee2097McGee2097ERR019714
McGee2097McGee2097ERR019725
McGee2097McGee2097ERR016851
McGee2167McGee2167ERR019716
McGee2167McGee2167ERR019727
McGee2167McGee2167ERR016853
McGee2231McGee2231ERR019717
McGee2231McGee2231ERR019728
McGee2231McGee2231ERR016854
McGee2311McGee2311ERR019718
McGee2311McGee2311ERR019729
McGee2311McGee2311ERR016855
McGee2321McGee2321ERR019719
McGee2321McGee2321ERR019730
McGee2321McGee2321ERR016856
McGee2615McGee2615ERR019720
McGee2615McGee2615ERR019731
McGee2615McGee2615ERR016857
McGee2682McGee2682ERR019721
McGee2682McGee2682ERR019732
McGee2682McGee2682ERR016858
McGee2699McGee2699ERR019722
McGee2699McGee2699ERR019733
McGee2699McGee2699ERR016859
McGee3267McGee3267ERR019723
McGee3267McGee3267ERR019734
McGee3267McGee3267ERR016860
McGee3350McGee3350ERR019715
McGee3350McGee3350ERR019726
McGee3350McGee3350ERR016852
McGee3355McGee3355ERR016681
McGee3365McGee3365ERR016683
McGeeB743McGeeB743ERR016684
McGeeBS1McGeeBS1ERR016685
McGeeBS24McGeeBS24ERR016686
McGeeBS26McGeeBS26ERR016687
McGeeDG104McGeeDG104ERR016688
McGeeDG116McGeeDG116ERR016689
McGeeDG15McGeeDG15ERR016690
McGeeDG18McGeeDG18ERR016682
McGeeDG29McGeeDG29ERR016705
McGeeDG80McGeeDG80ERR016706
McGeeDG99McGeeDG99ERR016707
McGeeGH10McGeeGH10ERR016708
McGeeMA28McGeeMA28ERR016709
McGeeS030McGeeS030ERR016710
McGeeS055McGeeS055ERR016711
McGeeS153McGeeS153ERR016712
ATCC700669ATCC700669ERR016714
Kor142Kor142ERR016715
McGeeB532McGeeB532ERR016716
SB141SB141ERR016717
McGee3265McGee3265ERR016722
KorTh83KorTh83ERR016718
McGeeS-054McGeeS-054ERR016719
McGee1731McGee1731ERR016720
McGee2098McGee2098ERR016721
SA1SA1ERR016747
SA2SA2ERR016749
SA11SA11ERR016748
SA12SA12ERR016758
SA3SA3ERR016757
SA4SA4ERR016756
SA5SA5ERR016755
SA6SA6ERR016754
SA7SA7ERR016753
SA8SA8ERR016752
SA9SA9ERR016751
SA10SA10ERR016750
SA13SA13ERR016760
SA14SA14ERR016762
SA23SA23ERR016761
SA25SA25ERR016771
SA16SA16ERR016770
SA17SA17ERR016769
SA18SA18ERR016768
SA19SA19ERR016767
SA20SA20ERR016766
SA21SA21ERR016765
SA22SA22ERR016764
SA24SA24ERR016763
SA27SA27ERR016773
SA26SA26ERR016775
SA36SA36ERR016774
SA37SA37ERR016784
SA28SA28ERR016783
SA29SA29ERR016782
SA30SA30ERR016781
SA31SA31ERR016780
SA32SA32ERR016779
SA33SA33ERR016778
SA34SA34ERR016777
SA35SA35ERR016776
SA38SA38ERR016786
SA46SA46ERR016788
SA72SA72ERR016787
SA73SA73ERR016797
SA51SA51ERR016796
SA56SA56ERR016795
SA57SA57ERR016794
SA61SA61ERR016793
SA64SA64ERR016792
SA66SA66ERR016791
SA69SA69ERR016790
SA70SA70ERR016789
SA76SA76ERR016799
SA77SA77ERR016801
SA106SA106ERR016800
SA107SA107ERR016810
SA78SA78ERR016809
SA81SA81ERR016808
SA87SA87ERR016807
SA90SA90ERR016806
SA92SA92ERR016805
SA93SA93ERR016804
SA95SA95ERR016803
SA101SA101ERR016802
SA108SA108ERR016812
SA112SA112ERR016814
SA140SA140ERR016813
SA141SA141ERR016823
SA116SA116ERR016822
SA117SA117ERR016821
SA124SA124ERR016820
SA126SA126ERR016819
SA130SA130ERR016818
SA131SA131ERR016817
SA132SA132ERR016816
SA134SA134ERR016815
SA142SA142ERR016825
SA143SA143ERR016827
SA152SA152ERR016826
SA153SA153ERR016836
SA144SA144ERR016835
SA145SA145ERR016834
SA146SA146ERR016833
SA147SA147ERR016832
SA148SA148ERR016831
SA149SA149ERR016830
SA150SA150ERR016829
SA151SA151ERR016828
277277ERR016838
902902ERR016840
38483848ERR016839
39013901ERR016849
28592859ERR016848
29052905ERR016847
29342934ERR016846
30273027ERR016845
32963296ERR016844
34133413ERR016843
36963696ERR016842
38423842ERR016841
41144114ERR016734
45454545ERR016736
84548454ERR016735
90299029ERR016745
PMEN1_46054605ERR016744
48264826ERR016743
51955195ERR016742
52045204ERR016741
60256025ERR016740
60396039ERR016739
81408140ERR016738
81438143ERR016737
93009300ERR024212
94099409ERR024214
1192311923ERR024213
1192411924ERR024223
1186511865ERR024222
1186711867ERR024221
1186811868ERR024220
1187511875ERR024219
1187611876ERR024218
1188111881ERR024217
1188311883ERR024216
1191911919ERR024215
1192511925ERR024228
1192811928ERR024229
1315013150ERR024230
1380413804ERR024231
1192911929ERR024232
1193011930ERR024233
1193211932ERR024234
1193311933ERR024235
1193411934ERR024236
1193511935ERR024226
1193611936ERR024227
1193711937ERR024225
2447824478ERR018819
2373823738ERR018820
2392023920ERR018829
2374823748ERR018828
2374923749ERR018827
2377123771ERR018826
2378223782ERR018825
2378423784ERR018824
2380523805ERR018823
2380923809ERR018822
2384123841ERR018821
BM4200BM4200ERR016724
118-87118-87ERR016732
135-94135-94ERR016731
484-93484-93ERR016730
88-9388-93ERR016729
848-95848-95ERR016728
1392-961392-96ERR016727
933-98933-98ERR016726
1437-961437-96ERR016725
042922PMEN142922ERR406039
042937PMEN142937ERR406040
2PN053482PN05348ERR023418
2PN053482PN05348ERR023440
3PN000203PN00020ERR023420
3PN000203PN00020ERR023442
3PN001333PN00133ERR023421
3PN001333PN00133ERR023443
3PN007343PN00734ERR023422
3PN007343PN00734ERR023444
3PN012873PN01287ERR023423
3PN012873PN01287ERR023445
3PN013603PN01360ERR023424
3PN013603PN01360ERR023446
H034800032H034800032ERR023425
H034800032H034800032ERR023447
H034960030H034960030ERR023426
H034960030H034960030ERR023448
H035220198H035220198ERR023427
H035220198H035220198ERR023449
H050340158H050340158ERR023419
H050340158H050340158ERR023441
H050300113H050300113ERR023429
H050300113H050300113ERR023451
H071440111H071440111ERR023431
H071440111H071440111ERR023453
H07528053101H07528053101ERR023432
H07528053101H07528053101ERR023454
H08016017901H08016017901ERR023433
H08016017901H08016017901ERR023455
LIV-5LIV-5ERR023434
LIV-5LIV-5ERR023456
PLY-7PLY-7ERR023435
PLY-7PLY-7ERR023457
STO-19STO-19ERR023436
STO-19STO-19ERR023458
STO-20STO-20ERR023437
STO-20STO-20ERR023459
2167AG2167AGERR023438
2167AG2167AGERR023460
2311AG2311AGERR023430
2311AG2311AGERR023452
11058110.58ERR023463
B10472B104.72ERR023462
02-119902-1199ERR023224
SA2_AGSA2_AGERR023228
SA77_AGSA77_AGERR023229
SA146_AGSA146_AGERR023230
385_AG385_AGERR023231
05-142705-1427ERR023232
4541205-2028ERR023233
94272402-4485ERR023234
6586605-2084ERR023235
HO51740086HO51740086ERR023225
05AR15305AR153ERR023226
24452445ERR023227
I-8I-8ERR024238
VII-17VII-17ERR024240
VII-22VII-22ERR024241
VII-26VII-26ERR024242
VII-28VII-28ERR024243
VIII-1VIII-1ERR024244
VIII-2VIII-2ERR024245
VIII-6VIII-6ERR024246
X-8X-8ERR024247
622622ERR024239
257257ERR024261
9HIM9HIMERR024249
109HIM109HIMERR024252
35CMN35CMNERR024253
36CMN36CMNERR024254
76HIM76HIMERR024255
61CMN61CMNERR024256
23CMN23CMNERR024257
46HIM46HIMERR024258
132HIM132HIMERR024259
11CMN11CMNERR024263
35HIM35HIMERR024250
13HIM13HIMERR024251
UR112UR112ERR024264
UR208UR208ERR024265
UR428UR428ERR024266
ARG740ARG740ERR024267
COL252COL252ERR024268
SVMC6SVMC6ERR024269
SVMC10SVMC10ERR024270
Clev2Clev 2ERR024262
31223122ERR024272
92959295ERR024276
94269426ERR024277
1112611126ERR024278
3761337613ERR024279
3356033560ERR024280
3636536365ERR024281
3614836148ERR024282
3747837478ERR024283
3851638516ERR024273
3411734117ERR024274
3380633806ERR024275

Genetic diversity on Streptococcus pneumoniae in Malawi 2

Sample

Strain

Run Accession

A33056A33056ERR023964
B13048B13048ERR023966
A33096A33096ERR023967
A35602A35602ERR023968
A36756A36756ERR023969
A38591A38591ERR023970
B11188B11188ERR023971
B11601B11601ERR023972
B11811B11811ERR023973
B12814B12814ERR023965
A51396A51396ERR023975
B17099B17099ERR023977
A51546A51546ERR023978
A47814A47814ERR023979
A47266A47266ERR023980
A49293A49293ERR023981
B15467B15467ERR023982
B15567B15567ERR023983
B16728B16728ERR023984
B16942B16942ERR023976
A51131A51131ERR023986
B18747B18747ERR023988
A51941A51941ERR023989
A51397A51397ERR023990
A52597A52597ERR023991
B17512B17512ERR023992
B18210B18210ERR023993
B18487B18487ERR023994
B18718B18718ERR023995
A51546aA51546ERR023987
51D25796UnknownERR033122
52D27145UnknownERR033124
61D34485UnknownERR033123
62D30974UnknownERR033133
53D23908UnknownERR033132
54D24904UnknownERR033131
55D28981UnknownERR033130
56C9215UnknownERR033129
57C10300UnknownERR033128
58C10592UnknownERR033127
59C10281UnknownERR033126
60C9551UnknownERR033125
87C17361UnknownERR033148
88C16023UnknownERR033150
97C18873UnknownERR033149
98C19046UnknownERR033159
89C16758UnknownERR033158
90C17578UnknownERR033157
91D46120UnknownERR033156
92D46897UnknownERR033155
93D47292UnknownERR033154
94D48309UnknownERR033153
95D47510UnknownERR033152
63D31555UnknownERR033135
64D32289UnknownERR033137
73D36881UnknownERR033136
74D38643UnknownERR033146
65D32344UnknownERR033145
66C11367UnknownERR033144
67C12111UnknownERR033143
68C12694UnknownERR033142
69C12907UnknownERR033141
70C13260UnknownERR033140
71D36355UnknownERR033139
72D37909UnknownERR033138
75D40273UnknownERR033109
76C14009UnknownERR033111
85D40857UnknownERR033110
86C17283UnknownERR033120
77C14477UnknownERR033119
78C15284UnknownERR033118
79C14086UnknownERR033117
80C15291UnknownERR033116
81D41212UnknownERR033115
82D42299UnknownERR033114
83D42660UnknownERR033113
84D44450UnknownERR033112
96C18031UnknownERR033151

Discovery of sequence diversity in Streptococcus pneumoniae serotype 1

Sample

Strain

Run Accession

1P0502041P050204ERR023568
11A05110411A051104ERR023572
12A27110412A271104ERR023573
13P25120413P251204ERR023574
2P1902042P190204ERR023575
3P2002043P200204ERR023576
4A2403044A240304ERR023577
5P2008045P200804ERR023578
6P0909046P090904ERR023579
7A1109047A110904ERR023569
8P2609048P260904ERR023570
10P10100410P101004ERR023571
14P13010514P130105ERR357210
24P06080524P060805ERR357211
25A27080525A270805ERR357212
26P29100526P291005ERR357213
15P19010515P190105ERR357214
16P21020516P210205ERR357215
17P27020517P270205ERR357216
19P15040519P150405ERR357217
20A10060520A100605ERR357218
21A15070521A150705ERR357219
22A11070522A110705ERR357220
23A31070523A310705ERR357221
27P09110527P091105ERR023581
36P28080636P280806ERR023585
37P27090637P270906ERR023586
38P07120638P071206ERR023587
28P22110528P221105ERR023588
29A31010629A310106ERR023589
30P10020630P100206ERR023590
31P22020631P220206ERR023591
32P17030632P170306ERR023592
33A04070633A040706ERR023582
34P05070634P050706ERR023583
35P05090635P050906ERR023584
39A18120639A181206ERR023594
48A30090748A300907ERR023598
49A22080749A220807ERR023599
50P02110750P021107ERR023600
40P16030740P160307ERR023601
41P19050741P190507ERR023602
42P23050742P230507ERR023603
43P06060743P060607ERR023604
44A17060744A170607ERR023605
45A26080745A260807ERR023595
46P25090746P250907ERR023596
47P26090747P260907ERR023597
51P25090751P250907ERR023607
60P13100860P131008ERR023611
61P23100861P231008ERR023612
62A27100862A271008ERR023613
52A11110752A111107ERR023614
53P09040853P090408ERR023615
54A09060854A090608ERR023616
55P15060855P150608ERR023617
56P01080856P010808ERR023618
57P19090857P190908ERR023608
58P29090858P290908ERR023609
59A06100859A061008ERR023610
63P22110863P221108ERR023347
D47858D47858ERR023351
A31470A31470ERR023352
C20818C20818ERR023353
64P17120864P171208ERR023354
D31030D31030ERR023355
A40447A40447ERR023356
B13691B13691ERR023357
C14599C14599ERR023358
C11680C11680ERR023348
A32245A32245ERR023349
B11955aB11955ERR023350
D31094D31094ERR023321
D43846D43846ERR023325
C12458C12458ERR023326
D28370D28370ERR023327
C19295C19295ERR023328
B10261B10261ERR023329
C15160C15160ERR023330
D28368D28368ERR023331
B19220B19220ERR023332
C14269C14269ERR023322
B10454B10454ERR023323
D51831D51831ERR023334
D33216D33216ERR023338
A53636A53636ERR023339
C13632C13632ERR023340
C17154C17154ERR023341
D32888D32888ERR023342
C14737C14737ERR023343
C17094C17094ERR023344
D36913D36913ERR023345
C18896C18896ERR023335
A47157A47157ERR023336
D28324D28324ERR045783
D53051D53051ERR045784
A56481A56481ERR045785
D28572D28572ERR045786
D38050D38050ERR045787
D28746D28746ERR045788
MLAB4946MLAB4946ERR045789
D48334D48334ERR045790
D48470D48470ERR045791
A37225A37225ERR045792
D42894D42894ERR045793
B18718aB18718ERR023324
B16942aB16942ERR023337
PNI_637UnknownERR042184
PNI_640UnknownERR042185
PNI_643UnknownERR042186
PNI_670UnknownERR042187
PNI_693UnknownERR042188
PNI_740UnknownERR042189
PNI_698UnknownERR042190
PNI_741UnknownERR042191
PNI_690UnknownERR042192
PNI_725UnknownERR042193
PNI_692UnknownERR042194
PNI_710UnknownERR042195
PNI_696UnknownERR042196
PNI_694UnknownERR042197
PNI_773UnknownERR042198
PNI_766UnknownERR042199
PNI_760UnknownERR042200
PNI_782UnknownERR042201
PNI_836UnknownERR042202
PNI_830UnknownERR042203
PSP_503UnknownERR042204
PSP_425UnknownERR042205
PSP_688UnknownERR042206
PSP_28UnknownERR042207
PSP_625UnknownERR042137
PSP_678UnknownERR042138
PSP_787UnknownERR042139
PSP_671UnknownERR042140
PSP_636UnknownERR042141
PSP_243UnknownERR042142
PSP_1881UnknownERR042143
PSP_2519UnknownERR042144
PSP_3969UnknownERR042145
PSP_1982UnknownERR042146
PSP_4022UnknownERR042147
PSP_3955UnknownERR042148
PSP_2227UnknownERR042149
Tg_082UnknownERR042150
Tg_054UnknownERR042151
Tg_342UnknownERR042152
Tg_012UnknownERR042153
Tg_315UnknownERR042154
Tg_373UnknownERR042155
NI_115UnknownERR042156
NI_1862UnknownERR042157
Sn_097UnknownERR042158
Sn_490UnknownERR042159
Sn_252UnknownERR042160
Sn_511UnknownERR042161
N2100AUnknownERR042162
N1335AUnknownERR042163
SVT_17022UnknownERR042164
SVT_12893UnknownERR042165
SVT_128711UnknownERR042166
SVT_133668UnknownERR042167
SVT_135677UnknownERR042168
SVT_128632UnknownERR042169
SVT_168778UnknownERR042170
SVT_167170UnknownERR042171
SVT_170645UnknownERR042172
SVT_168863UnknownERR042173
SVT_175845UnknownERR042174
SVT_01430UnknownERR042175
SVT_17067UnknownERR042176
SVT_66459UnknownERR042177
SVT_18049UnknownERR042178
SVT_167649UnknownERR042179
SVT_150567UnknownERR042180
SVT_110768UnknownERR042181
SVT_150369UnknownERR042182
SVT_23964UnknownERR042183
NIG588-02NIG 588-02ERR046710
NIG589-02NIG 589-02ERR046711
NIG99-03NIG 99-03ERR046712
NIG743-03NIG 743-03ERR046713
NIG954-03NIG 954-03ERR046714
NIG1712-03NIG 1712-03ERR046715
NIG2196-03NIG 2196-03ERR046716
NIG57-04NIG 57-04ERR046717
NIG80-04NIG 80-04ERR046718
NIG591-04NIG 591-04ERR046719
NIG42-05NIG 42-05ERR046720
NIG98-05NIG 98-05ERR046721
NIG227-05NIG 227-05ERR046722
NIG284-05NIG 284-05ERR046723
NIG353-05NIG 353-05ERR046724
NIG378-05NIG 378-05ERR046725
NIG382-05NIG 382-05ERR046726
NIG401-05NIG 401-05ERR046727
NIG545-05NIG 545-05ERR046728
NIG640-05NIG 640-05ERR059358
NIG716-05NIG 716-05ERR059359
NIG460-06NIG 460-06ERR059360
NIG828-06NIG 828-06ERR059361
NIG1144-06NIG 1144-06ERR059362
NIG1476-06NIG 1476-06ERR059363
NIG1634-06NIG 1634-06ERR059364
NIG2010-06NIG 2010-06ERR059365
NIG2028-06NIG 2028-06ERR059366
NIG137-07NIG 137-07ERR059367
NIG779-07NIG 779-07ERR059368
NIG38-08NIG 38-08ERR059369
NIG313-08NIG 313-08ERR059370
NIG656-08NIG 656-08ERR059371
NIG265-09NIG 265-09ERR059372
NIG460-09NIG 460-09ERR059373
NIG461-09NIG 461-09ERR059374
NIG2645-09NIG 2645-09ERR059375
NIG14-04NIG 14-04ERR059376
SN1186611866ERR052499
SN1186611866ERR052519
SN1187311873ERR052520
SN1187311873ERR052500
SN1187411874ERR052501
SN1187411874ERR052521
SN1188011880ERR052522
SN1188011880ERR052502
SN1189311893ERR052523
SN1189311893ERR052503
SN1189611896ERR052524
SN1189611896ERR052504
SN1191711917ERR052505
SN1191711917ERR052525
SN1192711927ERR052506
SN1192711927ERR052526
SN1194211942ERR052507
SN1194211942ERR052527
SN2364223642ERR052508
SN2364223642ERR052528
SN2517725177ERR052509
SN2517725177ERR052529
SN2656626566ERR052530
SN2656626566ERR052510
SN2657526575ERR052531
SN2657526575ERR052511
SN2658726587ERR052532
SN2658726587ERR052512
SN2658926589ERR052513
SN2658926589ERR052533
SN2659426594ERR052514
SN2659426594ERR052534
SN2662226622ERR052515
SN2662226622ERR052535
SN2675726757ERR052536
SN2675726757ERR052516
SN2754327543ERR052537
SN2754327543ERR052517
SN2755527555ERR052538
SN2755527555ERR052518
SN2760827608ERR055600
SN2768527685ERR055601
SN2777427774ERR055602
SN2814528145ERR055603
SN2816528165ERR055604
SN2843928439ERR055605
SN2873928739ERR055606
SN2884728847ERR055607
SN2997529975ERR055608
SN3076430764ERR055609
SN3098330983ERR055610
SN3144331443ERR055611
SN3182531825ERR055612
SN3183331833ERR055613
SN3200532005ERR055614
SN3287132871ERR055615
SN3300733007ERR055616
SN3467734677ERR055617
SN3467934679ERR055618
SN3493234932ERR055619
SP1579ST1ERR128823
SP1055ST1ERR128824
SP1202ST1ERR128825
SP1576ST1ERR128826
SP1577ST1ERR128827
SP1600ST1ERR128828
SP1540ST1ERR128829
SP1611ST1ERR128830
SP1629ST1ERR128831
SP1621ST1ERR128832
SP1623ST1ERR128833
SP1622ST1ERR128834
SP1583ST1ERR128835
SP1039ST1ERR128836
SP1631ST1ERR128837
SP1624ST1ERR128838
SP1605ST1ERR128839
SP1596ST1ERR128840
SP1606ST1ERR128841
SP1584ST1ERR128842
SP1078ST1ERR128843
SP1610ST1ERR128844
SP1595ST1ERR128845
SP1638ST1ERR128846
SP1648ST1ERR128847
SP1640ST1ERR128848
SP1642ST1ERR128849
SP1644ST1ERR128850
SP1641ST1ERR128851
SP1649ST1ERR128852
SP1592ST1ERR128853
SP1633ST1ERR128854
SP1634ST1ERR128855
SP1636ST1ERR128856
SP1637ST1ERR128857
PATH5341AIN-I2ERR223021
PATH4877RG3994ERR223020
PATH4865RG2363ERR223019
PATH4829RG2057ERR223018
PATH4783RG1867ERR223017
PATH4782RG1861ERR223016
PATH4536SJ0sp22ERR223015
PATH4519AH08spA4ERR223014
PATH4518AH08spA3ERR223013
PATH4517AH08spA2ERR223012
PATH4516AH08spA1ERR223011
PATH4481CQ08sp295ERR223010
PATH4427CS294ERR223009
PATH42313910ERR223008
PATH41561317ERR223007
PATH40481610212907ERR223006
PATH40431610208763ERR223005
PATH40421610207738ERR223004
PATH40331610202106ERR223003
PATH40321610202091ERR223002
PATH40251609228748ERR223001
PATH40171609220733ERR223000
PATH40061609207405ERR222999
PATH40011609205869ERR222998
PATH40001609203661ERR222997
PATH3760AY-206347ERR222996
PATH3654AY-189653ERR222995
PATH3653AY-182790ERR222994
PATH3643AX-134151ERR222993
PATH3630AW-97328ERR222992
PATH3612AU-37276ERR222991
PATH3610AU-31265ERR222990
PATH3360ENI-2-020ERR222989
PATH304490226ERR222988
PATH303790275ERR222987
PATH2298ENI-113ERR222986
PATH2095NC0004731AERR222985
PATH2059NA0001458ERR222984
PATH2048NA0000808CERR222983
PATH2034SA0001866ERR222982
PATH19980260-07ERR222981
PATH18710067-07ERR222980
PATH18630055-07ERR222979
PATH18480029-07ERR222978
PATH1779BB1814ERR222977
PATH1777BB2979ERR222976
PATH1776FF392ERR222975
PATH1772BB9114ERR222974
PATH1771BB1838ERR222973
PATH1769FF991ERR222972
PATH1768FF270ERR222971
PATH1767B2964ERR222970
PATH1766CS212ERR222969
PATH169617487ERR222968
PATH169216981ERR222967
PATH168616677ERR222966
PATH168416664ERR222965
PATH168216391ERR222964
PATH157011076ERR222949
PATH1537Ar 03ERR222948
PATH1528S 90ERR222947
PATH1527S 89ERR222946
PATH1510Ar 44ERR222945
PATH1508Ar 42ERR222944
PATH5489866914ERR223037
PATH5488866539.3ERR223036
PATH54461030476.1ERR223035
PATH54451035476.6ERR223034
PATH54331039549.3ERR223033
PATH54281020091.9ERR223032
PATH54261032421.9ERR223031
PATH54201020091.9ERR223030
PATH5396CH331ERR223029
PATH5389ATH-D23ERR223028
PATH5372ATH-C20ERR223027
PATH5371ATH-C15ERR223026
PATH5366APH-48ERR223025
PATH5360APH-08ERR223024
PATH5359APH-7ERR223023
PATH5343AIN-I08ERR223022
PATH157111077ERR222950
PATH167516059ERR222963
PATH165815418ERR222962
PATH165315139ERR222961
PATH165215138ERR222960
PATH164514860ERR222959
PATH163414667ERR222958
PATH162612893ERR222957
PATH160812498ERR222956
PATH158411355ERR222955
PATH158111235ERR222954
PATH157511157ERR222953
PATH157311155ERR222952
PATH157211105ERR222951
PATH1507Ar 41ERR222943
PATH1500Ar 34ERR222942
PATH359CS0700212ERR226336
PATH357FF0802750ERR226335
PATH147916ERR226326
PATH1493Ar 19ERR226421
PATH1486KS 104ERR226420
PATH1462KS 080ERR226419
PATH1461KS 079ERR226418
PATH1458KS 076ERR226417
PATH1450KS 068ERR226416
PATH1447KS 065ERR226415
PATH1444KS 062ERR226414
PATH1443KS 061ERR226413
PATH1403S 75ERR226412
PATH1393S 65ERR226411
PATH1383S 55ERR226410
PATH1377S 49ERR226409
PATH1356Br 33ERR226408
PATH1345Br 22ERR226407
PATH1339Br 15ERR226406
PATH1304KS 056ERR226405
PATH1303KS 055ERR226404
PATH1298KS 050ERR226403
PATH1285KS 037ERR226402
PATH1267S 46ERR226401
PATH1253HK 13ERR226400
PATH1070NZ 94ERR226399
PATH930NZ 19ERR226398
PATH929NZ 18ERR226397
PATH896KS 026ERR226396
PATH890KS 020ERR226395
PATH889KS 019ERR226394
PATH886KS 015ERR226393
PATH881KS 009ERR226392
PATH870HK 05ERR226391
PATH857S 26ERR226390
PATH767SA0001866ERR226389
PATH753635851.9ERR226388
PATH742635812ERR226387
PATH741617284.9ERR226386
PATH734611402.5ERR226385
PATH730617204.7ERR226384
PATH722593999.1ERR226383
PATH720603661.6ERR226382
PATH710603829.6ERR226381
PATH666550377.2ERR226380
PATH665587444.6ERR226379
PATH664516336.9ERR226378
PATH658520707.3ERR226377
PATH645364187.3ERR226376
PATH637487418.6ERR226375
PATH634360283.8ERR226374
PATH629473628.1ERR226373
PATH621461552.3ERR226372
PATH616162046ERR226371
PATH614487369.3ERR226370
PATH612360410.4ERR226369
PATH611360452.1ERR226368
PATH602310899.9ERR226367
PATH597352072.6ERR226366
PATH592416702.3ERR226365
PATH583304590.1ERR226364
PATH580290490.1ERR226363
PATH577370630.4ERR226362
PATH575379259.2ERR226361
PATH570370553.8ERR226360
PATH567379211ERR226359
PATH555311370.6ERR226358
PATH552305010.7ERR226357
PATH539282041.7ERR226356
PATH537282025.7ERR226355
PATH533281779.2ERR226354
PATH531281482.7ERR226353
PATH519265639.4ERR226352
PATH516264565ERR226351
PATH513265468.9ERR226350
PATH511252204.6ERR226349
PATH510265438.2ERR226348
PATH505265383.7ERR226347
PATH497252173.7ERR226346
PATH4140219026ERR226345
PATH4100201463ERR226344
PATH4070119828ERR226343
PATH4060112691ERR226342
PATH4030289-08ERR226341
PATH3940000001ERR226340
PATH3889916482ERR226339
PATH3859913287ERR226338
PATH360CS0802435ERR226337
PATH346BB0810965ERR226334
PATH345BB0802265ERR226333
PATH2232041ERR226332
PATH2041714ERR226331
PATH1981661ERR226330
PATH153926ERR226329
PATH152922ERR226328
PATH149918ERR226327
ILBStrepP15424574UnknownERR298120
ILBStrepP15424573UnknownERR298119
ILBStrepP15424572UnknownERR298118
ILBStrepP15424571UnknownERR298117
ILBStrepP15424570UnknownERR298116
ILBStrepP15424569UnknownERR298115
ILBStrepP15424568UnknownERR298114
ILBStrepP15424567UnknownERR298113
ILBStrepP15424566UnknownERR298112
ILBStrepP15424565UnknownERR298111
ILBStrepP15424564UnknownERR298110
ILBStrepP15424563UnknownERR298109
ILBStrepP15424562UnknownERR298108
ILBStrepP15424030MN11951ERR298107
ILBStrepP15424029NMD5107ERR298106
ILBStrepP15424028MN06303ERR298105
ILBStrepP15424027TNA6068ERR298104
ILBStrepP15424026MN05934ERR298103
ILBStrepP15424025TN32252ERR298102
ILBStrepP15424024OR02008ERR298101
ILBStrepP15424023OR07009ERR298100
ILBStrepP15424021O701433ERR298099
ILBStrepP15424020NY00310ERR298098
ILBStrepP15424019TNB6417ERR298097
ILBStrepP15424016CTD0664ERR298096
ILBStrepP15424013CT80343ERR298095
ILBStrepP15424011GA02211ERR298094
ILBStrepP15424010GA05429ERR298093
ILBStrepP15424007TN13368ERR298092
ILBStrepP15424006NY00408ERR298091
ILBStrepP15424005NMH5010ERR298090
ILBStrepP15424004MN18679ERR298089
ILBStrepP15424002TNE6086ERR298088
ILBStrepP15424001CTI1271ERR298087
ILBStrepP15424000NME5193ERR298086
ILBStrepP15423999ENI2-79ERR298085
ILBStrepP15423998788755.2ERR298084
ILBStrepP15423997780945.9ERR298083
ILBStrepP15423996696564.9ERR298082
ILBStrepP15423995724700.8ERR298081
ILBStrepP15423989731601.3ERR298075
ILBStrepP15423988731582.7ERR298074
ILBStrepP15423987866469.5ERR298073
ILBStrepP15423986814624.8ERR298072
ILBStrepP15424749UnknownERR298220
ILBStrepP15424747UnknownERR298219
ILBStrepP15424739UnknownERR298218
ILBStrepP15424731UnknownERR298217
ILBStrepP15424730UnknownERR298216
ILBStrepP15424725UnknownERR298215
ILBStrepP15424724UnknownERR298214
ILBStrepP15424723UnknownERR298213
ILBStrepP15424722UnknownERR298212
ILBStrepP15424718UnknownERR298211
ILBStrepP15424717UnknownERR298210
ILBStrepP15424715UnknownERR298209
ILBStrepP15424714UnknownERR298208
ILBStrepP15424710UnknownERR298207
ILBStrepP15424707UnknownERR298206
ILBStrepP15424699UnknownERR298205
ILBStrepP15424698UnknownERR298204
ILBStrepP15424693UnknownERR298203
ILBStrepP15424691UnknownERR298202
ILBStrepP15424690UnknownERR298201
ILBStrepP15424685UnknownERR298200
ILBStrepP15424683UnknownERR298199
ILBStrepP15424682UnknownERR298198
ILBStrepP15424678UnknownERR298197
ILBStrepP15424677UnknownERR298196
ILBStrepP15424676UnknownERR298195
ILBStrepP15424674UnknownERR298194
ILBStrepP15424670UnknownERR298193
ILBStrepP15424669UnknownERR298192
ILBStrepP15424668UnknownERR298191
ILBStrepP15424666UnknownERR298190
ILBStrepP15424656UnknownERR298189
ILBStrepP15424654UnknownERR298188
ILBStrepP15424652UnknownERR298187
ILBStrepP15424651UnknownERR298186
ILBStrepP15424647UnknownERR298185
ILBStrepP15424646UnknownERR298184
ILBStrepP15424645UnknownERR298183
ILBStrepP15424644UnknownERR298182
ILBStrepP15424643UnknownERR298181
ILBStrepP15424641UnknownERR298180
ILBStrepP15424639UnknownERR298179
ILBStrepP15424636UnknownERR298178
ILBStrepP15424635UnknownERR298177
ILBStrepP15424633UnknownERR298176
ILBStrepP15424631UnknownERR298175
ILBStrepP15424630UnknownERR298174
ILBStrepP15424629UnknownERR298173
ILBStrepP15424627UnknownERR298172
ILBStrepP15424622UnknownERR298171
ILBStrepP15424620UnknownERR298170
ILBStrepP15424619UnknownERR298169
ILBStrepP15424617UnknownERR298168
ILBStrepP15424662UnknownERR298167
ILBStrepP15424661UnknownERR298166
ILBStrepP15424660UnknownERR298165
ILBStrepP15424659UnknownERR298164
ILBStrepP15424658UnknownERR298163
ILBStrepP15424616UnknownERR298162
ILBStrepP15424615UnknownERR298161
ILBStrepP15424614UnknownERR298160
ILBStrepP15424613UnknownERR298159
ILBStrepP15424612UnknownERR298158
ILBStrepP15424611UnknownERR298157
ILBStrepP15424610UnknownERR298156
ILBStrepP15424609UnknownERR298155
ILBStrepP15424608UnknownERR298154
ILBStrepP15424607UnknownERR298153
ILBStrepP15424606UnknownERR298152
ILBStrepP15424605UnknownERR298151
ILBStrepP15424604UnknownERR298150
ILBStrepP15424603UnknownERR298149
ILBStrepP15424602UnknownERR298148
ILBStrepP15424601UnknownERR298147
ILBStrepP15424600UnknownERR298146
ILBStrepP15424599UnknownERR298145
ILBStrepP15424598UnknownERR298144
ILBStrepP15424597UnknownERR298143
ILBStrepP15424596UnknownERR298142
ILBStrepP15424595UnknownERR298141
ILBStrepP15424594UnknownERR298140
ILBStrepP15424593UnknownERR298139
ILBStrepP15424592UnknownERR298138
ILBStrepP15424591UnknownERR298137
ILBStrepP15424590UnknownERR298136
ILBStrepP15424589UnknownERR298135
ILBStrepP15424588UnknownERR298134
ILBStrepP15424587UnknownERR298133
ILBStrepP15424586UnknownERR298132
ILBStrepP15424585UnknownERR298131
ILBStrepP15424584UnknownERR298130
ILBStrepP15424583UnknownERR298129
ILBStrepP15424582UnknownERR298128
ILBStrepP15424581UnknownERR298127
ILBStrepP15424580UnknownERR298126
ILBStrepP15424579UnknownERR298125
ILBStrepP15424578UnknownERR298124
ILBStrepP15424577UnknownERR298123
ILBStrepP15424576UnknownERR298122
ILBStrepP15424575UnknownERR298121
ILBStrepP15423994744628.1ERR298080
ILBStrepP15423993696684.2ERR298079
ILBStrepP15423992745412.3ERR298078
ILBStrepP15423991716999.6ERR298077
ILBStrepP15423990724991.6ERR298076
ILBStrepP15524662ST1ERR351829
ILBStrepP15524661ST1ERR351828
ILBStrepP15524660ST1ERR351827
ILBStrepP15524659ST1ERR351826
ILBStrepP15524658ST1ERR351825
ILBStrepP15524657ST1ERR351824
ILBStrepP15524656ST1ERR351823
ILBStrepP15524655ST1ERR351822
ILBStrepP15524654ST1ERR351821
ILBStrepP15524653ST1ERR351820
ILBStrepP15524652ST1ERR351819
ILBStrepP15524651ST1ERR351818
ILBStrepP15524650ST1ERR351817
ILBStrepP15524649ST1ERR351816
ILBStrepP15524648ST1ERR351815
ILBStrepP15524647ST1ERR351814
ILBStrepP15524646ST1ERR351813
ILBStrepP15524645ST1ERR351812
ILBStrepP15524644ST1ERR351811
ILBStrepP15524643ST1ERR351810
ILBStrepP15524642ST1ERR351809
ILBStrepP15524641ST1ERR351808
ILBStrepP15524640ST1ERR351807
ILBStrepP15524639ST1ERR351806
ILBStrepP15524638ST1ERR351805
ILBStrepP15524637ST1ERR351804
ILBStrepP15524636ST1ERR351803
ILBStrepP15524635ST1ERR351802
ILBStrepP15524634ST1ERR351801
ILBStrepP15524633ST1ERR351800
ILBStrepP15524632ST1ERR351799
ILBStrepP15524631ST1ERR351798
ILBStrepP15524630ST1ERR351797
ILBStrepP15524629ST1ERR351796
ILBStrepP15524628ST1ERR351795
ILBStrepP15524627ST1ERR351794
ILBStrepP15524626ST1ERR351793
ILBStrepP15524625ST1ERR351792
ILBStrepP15524624ST1ERR351791
ILBStrepP15524623ST1ERR351790
ILBStrepP15524622ST1ERR351789
ILBStrepP15524621ST1ERR351788
ILBStrepP15524620ST1ERR351787
ILBStrepP15524619ST1ERR351786
ILBStrepP15524618ST1ERR351785
ILBStrepP15524617ST1ERR351784
ILBStrepP15524616ST1ERR351783
ILBStrepP15524615ST1ERR351782
ILBStrepP15524614ST1ERR351781
ILBStrepP15524613ST1ERR351780
ILBStrepP15524612ST1ERR351779
ILBStrepP15524611ST1ERR351778
ILBStrepP15524610ST1ERR351777
ILBStrepP15524609ST1ERR351776
ILBStrepP15524608ST1ERR351775
ILBStrepP15524607ST1ERR351774
ILBStrepP15524606ST1ERR351773
ILBStrepP15524605ST1ERR351772
ILBStrepP15524604ST1ERR351771
ILBStrepP15524603ST1ERR351770
ILBStrepP15524602ST1ERR351769
ILBStrepP15524601ST1ERR351768
ILBStrepP15524600ST1ERR351767
ILBStrepP15524599ST1ERR351766
ILBStrepP15524598ST1ERR351765
ILBStrepP15524597ST1ERR351764
ILBStrepP15524597ST1ERR373941
ILBStrepP15524596ST1ERR351763
ILBStrepP15524595ST1ERR351762
ILBStrepP15524594ST1ERR351761
CASMOR7260/12ERR351836
CASMOR66665/09ERR351835
CASMOR55736/09ERR351834
CASMOR42459/09ERR351833
CASMOR32500/08ERR351832
CASMOR2297/08ERR351831
CASMOR112223/07ERR351830
ILBStrepP155392291ERR373940
ILBStrepP155392131ERR373939
ILBStrepP155392281ERR373938
ILBStrepP155392251ERR373937
ILBStrepP155392271ERR373936
ILBStrepP155392151ERR373935
ILBStrepP155392221ERR373934
ILBStrepP155392301ERR373933
ILBStrepP155391991ERR373932
ILBStrepP155392161ERR373931
ILBStrepP155392141ERR373930
ILBStrepP155392241ERR373929
ILBStrepP155392261ERR373928
ILBStrepP155392111ERR373927
ILBStrepP155392051ERR373926
ILBStrepP155392081ERR373925
ILBStrepP155392021ERR373924
ILBStrepP155392041ERR373923
ILBStrepP155392211ERR373922
ILBStrepP155392071ERR373921
ILBStrepP155391971ERR373920
ILBStrepP155392171ERR373919
ILBStrepP155392011ERR373918
ILBStrepP155392091ERR373917
ILBStrepP155392001ERR373916
ILBStrepP155392121ERR373915
ILBStrepP155392201ERR373914
ILBStrepP155392181ERR373913
ILBStrepP155392191ERR373912
ILBStrepP155392101ERR373911
ILBStrepP155391981ERR373910
ILBStrepP155392061ERR373909
ILBStrepP155392231ERR373908
ILBStrepP155392031ERR373907
W0001640ST4ERR403191
MLAB7062ST3ERR403190
B13969ST2ERR403189
A42174_AST1ERR403188
2245STDY5579795UnknownERR484535
2245STDY5579795UnknownERR387639
2245STDY5579804UnknownERR387648
2245STDY5579803UnknownERR387647
2245STDY5579802UnknownERR387646
2245STDY5579801UnknownERR387645
2245STDY5579800UnknownERR387644
2245STDY5579799UnknownERR387643
2245STDY5579798UnknownERR387642
2245STDY5579797UnknownERR387641
2245STDY5579796UnknownERR387640
2245STDY5579794UnknownERR387638
2245STDY5579793UnknownERR387637
2245STDY5579792UnknownERR387636
2245STDY5579791UnknownERR387635
2245STDY5579790UnknownERR387634
2245STDY5579789UnknownERR387633
2245STDY5579788UnknownERR387632
2245STDY5579787UnknownERR387631
2245STDY5579786UnknownERR387630
2245STDY5579785UnknownERR387629
2245STDY5579784UnknownERR387628
2245STDY5579783UnknownERR387627
2245STDY5579782UnknownERR387626
2245STDY5579781UnknownERR387625
2245STDY5579780UnknownERR387624
2245STDY5579779UnknownERR387623
2245STDY5579778UnknownERR387622
2245STDY5579777UnknownERR387621
2245STDY5579776UnknownERR387620
2245STDY5579775UnknownERR387619
2245STDY5579774UnknownERR387618
2245STDY5579773UnknownERR387617
2245STDY5579772UnknownERR387616
2245STDY5579771UnknownERR387615
2245STDY5579770UnknownERR387614
2245STDY5579769UnknownERR387613
2245STDY5579768UnknownERR387612
2245STDY5579767UnknownERR387611
2245STDY5579766UnknownERR387610
2245STDY5579765UnknownERR387609
2245STDY5579764UnknownERR387608
2245STDY5579763UnknownERR387607
2245STDY5579762UnknownERR387606
2245STDY5579761UnknownERR387605
2245STDY5579760UnknownERR387604
2245STDY5579759UnknownERR387603
2245STDY5579758UnknownERR387602
2245STDY5579757UnknownERR387601
2245STDY5579756UnknownERR387600
2245STDY5579755UnknownERR387599
2245STDY5579754UnknownERR387598
2245STDY5579753UnknownERR387597
2245STDY5579752UnknownERR387596
2245STDY5579751UnknownERR387595
2245STDY5579750UnknownERR387594
2245STDY5579749UnknownERR387593
2245STDY5579748UnknownERR387592
2245STDY5579747UnknownERR387591
2245STDY5579746UnknownERR387590
2245STDY5579744UnknownERR387588
2245STDY5579743UnknownERR387587
2245STDY5579742UnknownERR387586
2245STDY5579741UnknownERR387585
2245STDY5579740UnknownERR387584
2245STDY5579739UnknownERR387583
2245STDY5579738UnknownERR387582
2245STDY5579737UnknownERR387581
2245STDY5579736UnknownERR387580
2245STDY5579735UnknownERR387579
2245STDY5579734UnknownERR387578
2245STDY5579733UnknownERR387577
2245STDY5579732UnknownERR387576
2245STDY5579731UnknownERR387575
2245STDY5579730UnknownERR387574
2245STDY5579729UnknownERR387573
2245STDY5579728UnknownERR387572
2245STDY5579727UnknownERR387571
2245STDY5579726UnknownERR387570
2245STDY5579725UnknownERR387569
2245STDY5579724UnknownERR387568
2245STDY5579723UnknownERR387567
2245STDY5579722UnknownERR387566
2245STDY5579721UnknownERR387565
2245STDY5579720UnknownERR387564
2245STDY5579719UnknownERR387563
2245STDY5579718UnknownERR387562
2245STDY5579717UnknownERR387561
2245STDY5579716UnknownERR387560
2245STDY5579715UnknownERR387559
2245STDY5579714UnknownERR387558
2245STDY5579713UnknownERR387557
2245STDY5579712UnknownERR387556
2245STDY5579711UnknownERR387555
2245STDY5579710UnknownERR387554
2245STDY5524776UnknownERR352077
2245STDY5524775UnknownERR352076
2245STDY5524774UnknownERR352075
2245STDY5524772UnknownERR352073
2245STDY5524771UnknownERR352072
2245STDY5524770UnknownERR352071
2245STDY5524764UnknownERR352065
2245STDY5524763UnknownERR352064
2245STDY5524762UnknownERR352063
2245STDY5524761UnknownERR352062
2245STDY5524760UnknownERR352061
2245STDY5579745UnknownERR485116
2245STDY5579745UnknownERR387589
2245STDY5775885UnknownERR570475
2245STDY5524773UnknownERR352074
2245STDY5524769UnknownERR352070
2245STDY5524768UnknownERR352069
2245STDY5524767UnknownERR352068
2245STDY5524766UnknownERR352067
2245STDY5524765UnknownERR352066
2245STDY5524759UnknownERR352060
2245STDY5524758UnknownERR352059
2245STDY5524757UnknownERR352058

Streptococcus pneumoniae evolution

Sample

Strain

Run Accession

615sUS64347-99ERR025254
615sUS80680-02ERR025258
615sUS9PATH#183ERR025259
615sUS11PATH#286ERR025260
615sUS12PATH#678ERR025261
615sUS13PATH#688ERR025262
615sUS20PATH#129ERR025263
PMEN2Spain6B-2ERR025264
PMEN3Spain9V-3ERR025265
PMEN4Tennessee23F-4ERR025255
PMEN5Spain14-5ERR025256
PMEN9England14-9ERR025257
PMEN10CSR14-10ERR025267
PMEN12Finland6B-12ERR025271
PMEN15Taiwan23F-15ERR025272
PMEN17Maryland6B-17ERR025273
PMEN18Tennessee14-18ERR025274
PMEN22Greece6B-22ERR025275
PMEN34Denmark12F-34ERR025276
PMEN35Netherlands14-35ERR025277
PMEN36Netherlands18C-36ERR025278
PMEN39Netherlands7F-39ERR025268
ICE7ICE7ERR025269
ICE11ICE11ERR025270
615s222/2ERR025820
615s7A27A/2ERR025824
615s7B27B/2ERR025825
615s9A19A/1ERR025826
615s9V49V/4ERR025827
615s10F210F/2ERR025828
615s11C111C/1ERR025829
615s14214/2ERR025830
615s17F117F/1ERR025831
615s23A223A/2ERR025821
615s22A222A/2ERR025822
615s35C335C/3ERR025823
615s7F27F/2ERR026172
615s7F37F/3ERR026176
615s7F47F/4ERR026177
615s9L29L/2ERR026178
615s9N29N/2ERR026179
615s9N69N/6ERR026180
615s9V59V/5ERR026181
615s9V69V/6ERR026182
615s12F212F/2ERR026183
615s18F118F/1ERR026173
615s19F1019F/10ERR026174
615s19F1119F/11ERR026175
615s19F1219F/12ERR026185
615s19F719F/7ERR026189
615s19F819F/8ERR026190
615s23F423F/4ERR026191
615s35C235C/2ERR026192
615s18B218B/2ERR026193
615s23F1023F/10ERR026194
615s12F312F/3ERR026195
615s12F512F/5ERR026196
615s18C218C/2ERR026186
615s12F612F/6ERR026187
615s14414/4ERR026188
ICE13ICE13ERR026198
ICE23ICE23ERR026202
ICE27ICE27ERR026203
ICE50ICE50ERR026204
ICE57ICE57ERR026205
ICE186ICE186ERR026206
ICE211ICE211ERR026207
ICE269ICE269ERR026208
ICE501ICE501ERR026209
ICE570ICE570ERR026199
ICE594ICE594ERR026200
PMEN14Taiwan19F-14ERR026201
615s232/3ERR026715
615s14314/3ERR026719
615s14514/5ERR026720
615s14714/7ERR026721
615s14814/8ERR026722
615s14914/9ERR026723
17F217F/2ERR026724
17F317F/3ERR026725
17F417F/4ERR026726
18C318C/3ERR026716
19F519F/5ERR026717
23F523F/5ERR026718
A243L2003-01243ERR028708
A263L2003-01263ERR028712
A289L2003-01289ERR028713
A292L2003-01292ERR028714
A317L2003-01317ERR028715
US26223-99ERR028716
US16PATH#224ERR028717
US184621-00ERR028718
US223140-06ERR028719
ICE22ICE22ERR028709
ICE46ICE46ERR028710
PMEN13S.Africa19A-13ERR028711
ABB_US3183MI23FERR163232
ABB_US3485NY19AERR163231
ABB_US2785NY23FERR163230
ABB_US4891GA23FERR163229
ABB_US2389FL23FERR163228
ABB_US3381CO6BERR163227
ABB_US3990MO6BERR163226
ABB_US4785UT23FERR163225
ABB_US4284PA23FERR163224
ABB_US3589NY23FERR163223
ABB_US2888FL23FERR163222
ABB_US2685PA23FERR163221
ABB_PN1Pn12ERR163220
ABB_PN2P1ERR163219
ABB_SA8346518ERR163218
ABB_SA8247085ERR163217
ABB_SA8123099ERR163216
ABB_SA8022453ERR163215
ABB_SA7949171ERR163214
ABB_SA7847590ERR163213
ABB_SA7726940ERR163212
ABB_SA7695103ERR163211
ABB_SA7513619ERR163210
ABB_SA7413897ERR163209
ABB_SA7348628ERR163208
ABB_SA7234139ERR163207
ABB_SA7134581ERR163206
ABB_SA706130ERR163205
ABB_SA6934142ERR163204
ABB_SA6803904ERR163203
ABB_SA6734023ERR163202
ABB_SA666428ERR163201
ABB_SA656076ERR163200
ABB_SA646482ERR163199
ABB_SA6393343ERR163198
ABB_SA6228649ERR163197
ABB_SA6197ERR163196
ABB_SA60511ERR163195
ABB_SA593630ERR163194
ABB_SA5819931ERR163193
ABB_SA57108551ERR163192
ABB_SA566415ERR163191
ABB_SA5531664ERR163190
ABB_SA54136664ERR163189
ABB_SA53N383ERR163188
ABB_SA5213979ERR163187
ABB_SA5146878ERR163186
ABB_SA4948-2ERR163185
ABB_SA4848ERR163184
ABB_SA4797-1ERR163183
ABB_SA45SA25ERR163182
ABB_SA44SA24ERR163181
ABB_SA43SA23ERR163180
ABB_SA42SA22ERR163179
ABB_SA41SA21ERR163178
ABB_SA40SA20ERR163177
ABB_SA39SA19ERR163176
ABB_SA38SA18ERR163175
ABB_SA37SA14ERR163174
ABB_SA36SA13ERR163173
ABB_SA35SA12ERR163172
ABB_SA34SA11ERR163171
ABB_SA32SA9ERR163170
ABB_SA31SA8ERR163169
ABB_SA28SA5ERR163168
ABB_SA26A1002ERR163167
ABB_SA25A910ERR163166
ABB_SA24A922ERR163165
ABB_SA2361370ERR163164
ABB_SA2261855ERR163163
ABB_SA21135ERR163162
ABB_SA2061154ERR163161
ABB_SA1961153ERR163160
ABB_SA18223 (6A)ERR163159
ABB_SA1713811ERR163158
ABB_SA1661155ERR163157
ABB_SA15532ERR163156
ABB_SA1462272ERR163155
ABB_SA1360293ERR163154
ABB_SA12994ERR163153
ABB_SA1160292ERR163152
ABB_SA10DURBANTERR163151
ABB_SA9205ERR163150
ABB_SA8209ERR163149
ABB_SA7145ERR163148
ABB_SA661783ERR163147
ABB_SA561857ERR163146
ABB_SA4107ERR163145
ABB_SA3381ERR163144
ABB_SA2223 (19A)ERR163143
ABB_SA1203AERR163142
ABB_US2489SA23FERR163141
ABB_SA27SA4ERR163140
ABB_SA84SA3ERR163139
ABB_6B_8ATCC 700675ERR163138

Streptococcus pneumoniae ST180 diversity

Sample

Strain

Run Accession

BHN036BHN036ERR026211
BHN413BHN413ERR026215
BHN570BHN570ERR026216
BHN571BHN571ERR026217
BHN572BHN572ERR026218
BHN573BHN573ERR026219
BHN574BHN574ERR026220
BHN429BHN429ERR026221
BHN575BHN575ERR026222
BHN576BHN576ERR026212
BHN577BHN577ERR026213
BHN578BHN578ERR026214
BHN579BHN579ERR026224
BHN580BHN580ERR026228
BHN428BHN428ERR026229
BHN582BHN582ERR026230
BHN583BHN583ERR026231
BHN035BHN035ERR026232
BHN584BHN584ERR026233
BHN585BHN585ERR026234
BHN586BHN586ERR026235
BHN587BHN587ERR026225
BHN588BHN588ERR026226
BHN589BHN589ERR026227
BHN590BHN590ERR026237
BHN591BHN591ERR026241
BHN592BHN592ERR026242
BHN593BHN593ERR026243
BHN594BHN594ERR026244
BHN595BHN595ERR026245
BHN596BHN596ERR026246
BHN597BHN597ERR026247
BHN598BHN598ERR026248
BHN599BHN599ERR026238
BHN600BHN600ERR026239
BHN601BHN601ERR026240
BHN602BHN602ERR025280
BHN603BHN603ERR025284
BHN604BHN604ERR025285
BHN605BHN605ERR025286
BHN606BHN606ERR025287
BHN607BHN607ERR025288
BHN608BHN608ERR025289
BHN609BHN609ERR025290
BHN610BHN610ERR025291
BHN611BHN611ERR025281
BHN612BHN612ERR025282
BHN341BHN341ERR025283
BHN616BHN616ERR025293
BHN037BHN037ERR025297
BHN167BHN167ERR025298
BHN414BHN414ERR025299
BHN618BHN618ERR025300
BHN369BHN369ERR025301
BHN383BHN383ERR025302
BHN621BHN621ERR025303
BHN622BHN622ERR025304
BHN623BHN623ERR025294
BHN624BHN624ERR025295
BHN625BHN625ERR025296
BHN626BHN626ERR025306
BHN628BHN628ERR025309
BHN629BHN629ERR025310
BHN630BHN630ERR025311
BHN631BHN631ERR025312
BHN632BHN632ERR025313
BHN633BHN633ERR025314
BHN636BHN636ERR025315
BHN637BHN637ERR025316
BHN638BHN638ERR025307
BHN640BHN640ERR025308
BHN642BHN642ERR025318
BHN643BHN643ERR025321
BHN644BHN644ERR025322
BHN645BHN645ERR025323
BHN646BHN646ERR025324
BHN647BHN647ERR025325
BHN650BHN650ERR025326
BHN651BHN651ERR025327
BHN652BHN652ERR025328
BHN654BHN654ERR025319
BHN657BHN657ERR025320

Streptococcus pneumoniae global lineages

Sample

Strain

Run Accession

spnSP522SP522ERR028734
spnSP681SP681ERR028738
spnIC59IC59ERR028739
spnIC58IC58ERR028740
spnIC57IC57ERR028741
spnIC55IC55ERR028742
spnIC54IC54ERR028743
spnIC52IC52ERR028744
spnIC51IC51ERR028745
spnIC49IC49ERR028735
spnIC48IC48ERR028736
spnIC43IC43ERR028737
spnIC42IC42ERR028590
spnIC41IC41ERR028594
spnIC38IC38ERR028595
spnIC28IC28ERR028596
spnIC19IC19ERR028597
spnIC10IC10ERR028598
spnIC6IC6ERR028599
spnIC2IC2ERR028600
spnIC100IC100ERR028601
spnIC104IC104ERR028591
spnIC116IC116ERR028592
spnIC120IC120ERR028593
spnIC139IC139ERR028747
spnIC141IC141ERR028751
spnIC145IC145ERR028752
spnIC161IC161ERR028753
spnIC174IC174ERR028754
spnIC176IC176ERR028755
spnIC178IC178ERR028756
spnIC187IC187ERR028757
spnIC190IC190ERR028758
spnIC192IC192ERR028748
spnIC195IC195ERR028749
spnIC197IC197ERR028750
spnIC203IC203ERR028760
spnIC210IC210ERR028764
spnIC220IC220ERR028765
spnIC419IC419ERR028766
spnIC425IC425ERR028767
spnIC426IC426ERR028768
spnIC432IC432ERR028769
spnIC434IC434ERR028770
spnIC463IC463ERR028771
08B01507ARI-0038ERR028761
08B02452ARI-0097ERR028762
08B02857ARI-0090ERR028763
08B02909ARI-0374ERR026943
08B02945ARI-0083ERR026947
08B02946ARI-0083ERR026948
08B03195ARI-0097ERR026949
08B03587ARI-0428ERR026950
08B03669ARI-0358ERR026951
08B03741ARI-0374ERR026952
08B04036ARI-0372ERR026953
08B04572ARI-0358ERR026954
08B04698ARI-0038ERR026944
08B04886ARI-0372ERR026945
08B05402ARI-0423ERR026946
08B05606ARI-0227ERR026956
08B05607ARI-0227ERR026960
08B05712ARI-0518ERR026961
08B05713ARI-0518ERR026962
08B05769ARI-0131ERR026963
08B05958ARI-0372ERR026964
08B05979ARI-0275ERR026965
08B05980ARI-0275ERR026966
08B06461ARI-0423ERR026967
08B07106ARI-0235ERR026957
08B07107ARI-0031ERR026958
08B07108ARI-0031ERR026959
08B07218ARI-0399ERR026969
08B07219ARI-0399ERR026973
08B07341ARI-0356ERR026974
08B07447ARI-0372ERR026975
08B08538ARI-0800ERR026976
08B08622ARI-0381ERR026977
08B08624ARI-0004ERR026978
08B08638ARI-0372ERR026979
08B09149ARI-0694ERR026980
08B09150ARI-0694ERR026970
08B09703ARI-0810ERR026971
08B09843ARI-0372ERR026972
08B10069ARI-0091ERR026982
08B10227ARI-0090ERR026986
08B10239ARI-0356ERR026987
08B10337ARI-0859ERR026988
08B10767ARI-0581ERR026989
08B10768ARI-0581ERR026990
08B10803ARI-0235ERR026991
09B00083ARI-0131ERR026992
09B00197ARI-0410ERR026993
09B00208ARI-0314ERR026983
09B00218ARI-0418ERR026984
09B00294ARI-0450ERR026985
09B00295ARI-0450ERR026995
09B00621ARI-0438ERR026999
09B00632ARI-0916ERR027000
09B00825ARI-0767ERR027001
09B01073ARI-0235ERR027002
09B01133ARI-0800ERR027003
09B01140ARI-0381ERR027004
09B01218ARI-0372ERR027005
09B01296ARI-0654ERR027006
09B01302ARI-0410ERR026996
09B01303ARI-9998ERR026997
09B01564ARI-0637ERR026998
09B01708ARI-0438ERR027008
09B01717ARI-0475ERR027012
09B01718ARI-0475ERR027013
09B01841ARI-0460ERR027014
09B02346ARI-0372ERR027015
09B02518ARI-0468ERR027016
09B02732ARI-0522ERR027017
09B02733ARI-0522ERR027018
09B02735ARI-0360ERR027019
09B02770ARI-0332ERR027009
09B02850ARI-0438ERR027010
09B03357ARI-0410ERR027011
09B03385ARI-0372ERR027021
09B03635ARI-0750ERR027024
09B03716ARI-0438ERR027025
09B04337ARI-0652ERR027026
09B04807ARI-0637ERR027027
09B04859ARI-0872ERR027028
09B05212ARI-0691ERR027029
09B05541ARI-0578ERR027030
09B05642ARI-0982ERR027031
09B05724ARI-0983ERR027022
09B06006ARI-0547ERR027023
09B06093ARI-0872ERR027033
09B06515ARI-0929ERR027036
09B06561ARI-0675ERR027037
09B06974ARI-0959ERR027038
09B07251ARI-0859ERR027039
09B07412ARI-0813ERR027040
09B07478ARI-0619ERR027041
09B07685ARI-0929ERR027042
09B07963ARI-0857ERR027043
09B08647ARI-0813ERR027034
09B08788ARI-0915ERR027035
spnMD5023MD5023ERR028773
09B09042ARI-0741ERR028776
09B09043ARI-0741ERR028777
09B09045ARI-0964ERR028778
09B09095ARI-0899ERR028779
09B09449ARI-0965ERR028780
09B09450ARI-0965ERR028781
09B09593ARI-0901ERR028782
09B09640ARI-0998ERR028783
09B09641ARI-0998ERR028774
09B10330ARI-0943ERR028775
K13_0810K13_0810ERR029278
K13_0827K13_0827ERR029282
K13_0913K13_0913ERR029283
K13_0940K13_0940ERR029284
K01_071205K01_071205ERR029285
K01_071218K01_071218ERR029286
K13_0820K13_0820ERR029287
K08_097K08_097ERR029288
K13_082K13_082ERR029289
K01_071280K01_071280ERR029279
K13_0925K13_0925ERR029280
K01_01237K01_01237ERR029281
K01_01244K01_01244ERR028785
K01_01248K01_01248ERR028788
K01_99124K01_99124ERR028789
K01_99176K01_99176ERR028790
K01_99219K01_99219ERR028791
K13_0819K13_0819ERR028792
K13_0822K13_0822ERR028793
K01_094K01_094ERR028794
K13_0922K13_0922ERR028795
K13_0941K13_0941ERR028786
K13_0947K13_0947ERR028787
K01_99109K01_99109ERR028797
K01_99117K01_99117ERR028800
K01_99196K01_99196ERR028801
K11_061K11_061ERR028802
K01_99123K01_99123ERR028803
C03_00126C03_00126ERR028804
C01_0019C01_0019ERR028805
Tw01_0057Tw01_0057ERR028806
Tw01_0059Tw01_0059ERR028807
Tw01_0067Tw01_0067ERR028798
Tw01_0026Tw01_0026ERR028799
Tw01_0055Tw01_0055ERR028809
HK01_0168HK01_0168ERR028812
HK01_0036HK01_0036ERR028813
HK01_0147HK01_0147ERR028814
M01_9962M01_9962ERR028815
M01_9964M01_9964ERR028816
M01_0087M01_0087ERR028817
M01_9995M01_9995ERR028818
V01_99112V01_99112ERR028819
V01_01107V01_01107ERR028810
deltaCPSdeltaCPSERR028811
LMG33ERR051791
LMG99ERR051792
LMG1010ERR051793
LMG2525ERR051794
LMG7777ERR051795
LMG8282ERR051796
LMG8585ERR051797
LMG8787ERR051798
LMG9090ERR051799
LMG9494ERR051800
LMG9595ERR051801
LMG9696ERR051802
LMG9797ERR051904
LMG132132ERR052001
LMG136136ERR051905
LMG137137ERR052002
LMG138138ERR052003
LMG140140ERR052004
LMG162162ERR052005
LMG171171ERR051906
LMG172172ERR051907
LMG188188ERR052006
LMG189189ERR051908
LMG192192ERR052007
LMG194194ERR051909
LMG196196ERR051910
LMG199199ERR052008
LMG200200ERR051911
LMG201201ERR052009
LMG202202ERR052010
LMG210210ERR052011
LMG211211ERR052012
LMG215215ERR051912
LMG216216ERR052013
LMG217217ERR051803
LMG226226ERR051804
LMG228228ERR051805
LMG230230ERR051806
LMG232232ERR051807
LMG235235ERR051808
LMG244244ERR051809
LMG248248ERR051810
LMG250250ERR051811
LMG259259ERR051812
LMG260260ERR051813
LMG282282ERR051814
LMG325325ERR051913
LMG329329ERR052014
LMG335335ERR052015
LMG342342ERR051914
LMG363363ERR051915
LMG371371ERR051916
LMG375375ERR051917
LMG423423ERR051918
LMG686686ERR051919
LMG687687ERR051920
LMG690690ERR051921
LMG695695ERR051922
LMG707707ERR051923
LMG759759ERR051924
LMG764764ERR051925
LMG779779ERR052016
LMG804804ERR052017
LMG810810ERR051926
LMG815815ERR051927
LMG818818ERR051928
LMG825825ERR052018
LMG839839ERR052019
LMG840840ERR051929
LMG846846ERR052020
LMG863863ERR052021
LMG865865ERR052022
LMG867867ERR051930
LMG869869ERR052023
LMG872872ERR052024
LMG887887ERR052025
LMG909909ERR052026
LMG912912ERR052027
LMG913913ERR052028
LMG922922ERR052029
LMG933933ERR052030
LMG941941ERR052031
LMG944944ERR052032
LMG946946ERR051815
LMG952952ERR051816
LMG959959ERR051817
LMG961961ERR051818
LMG962962ERR051819
LMG970970ERR051820
LMG973973ERR051821
LMG10011001ERR051822
LMG10441044ERR051823
LMG10481048ERR051824
LMG10491049ERR051825
LMG10531053ERR051826
LMG10551055ERR052033
LMG10901090ERR052034
LMG12151215ERR051931
LMG12431243ERR052035
LMG12451245ERR052036
LMG12491249ERR052037
LMG12501250ERR052038
LMG12701270ERR051932
LMG12781278ERR052039
LMG12801280ERR052040
LMG12971297ERR051933
LMG13591359ERR051934
LMG13621362ERR051935
LMG13671367ERR052041
LMG13871387ERR052042
LMG14151415ERR051936
LMG14161416ERR051937
LMG14171417ERR051938
LMG14251425ERR051939
LMG14271427ERR051940
LMG14351435ERR052043
LMG14511451ERR051941
LMG14631463ERR051942
LMG14791479ERR051943
LMG14811481ERR051944
LMG15341534ERR052044
LMG15611561ERR052045
LMG15621562ERR051945
LMG15831583ERR052046
LMG16771677ERR051946
LMG16951695ERR051947
LMG19781978ERR051948
LMG20352035ERR051949
LMG20502050ERR051950
LMG20622062ERR051951
LMG22102210ERR051952
LMG22182218ERR051953
LMG22202220ERR051954
LMG22272227ERR271764
LMG22302230ERR051955
LMG22492249ERR271765
LMG22592259ERR271766
LMG22602260ERR051956
LMG22612261ERR051957
LMG22792279ERR051958
LMG22832283ERR051959
LMG22902290ERR051960
LMG22912291ERR051961
LMG23002300ERR051962
LMG23022302ERR051963
LMG23062306ERR271767
LMG23102310ERR051964
LMG23112311ERR051965
LMG25262526ERR271768
LMG25502550ERR271769
LMG25902590ERR271770
LMG25922592ERR271771
LMG27322732ERR271772
LMG28882888ERR051966
LMG29262926ERR271773
LMG33593359ERR051967
LMG33673367ERR051968
LMG33843384ERR051969
LMG33853385ERR051970
0246-020246-02ERR271774
0315-020315-02ERR051827
0939-000939-00ERR051828
1014-001014-00ERR051829
1018-001018-00ERR051830
1042-001042-00ERR051831
1081-001081-00ERR051832
1422-001422-00ERR051833
1965-001965-00ERR051834
2522-012522-01ERR051835
3063-003063-00ERR051836
3092-993092-99ERR051837
3224-063224-06ERR051838
3226-063226-06ERR271775
3339-033339-03ERR271776
3343-083343-08ERR271777
3414-993414-99ERR271778
3626-033626-03ERR271779
3900-063900-06ERR271780
3919-053919-05ERR271781
4050-004050-00ERR051971
4070-004070-00ERR271782
4095-044095-04ERR271783
4270-034270-03ERR271784
4764-034764-03ERR051839
4865-074865-07ERR051840
4911-024911-02ERR051841
4916-024916-02ERR051842
4976-034976-03ERR051843
5067-035067-03ERR051844
5317-995317-99ERR051845
5351-005351-00ERR051846
5653-055653-05ERR051847
5697-995697-99ERR051848
5720-065720-06ERR051849
5759-075759-07ERR051850
5761-055761-05ERR051851
6006-996006-99ERR051852
6027-026027-02ERR051853
6116-056116-05ERR051854
6316-076316-07ERR051855
6365-076365-07ERR051856
6378-056378-05ERR051857
6378-996378-99ERR051858
6470-036470-03ERR051859
6525-996525-99ERR051860
6550-036550-03ERR051861
6560-016560-01ERR051862
6575-076575-07ERR051863
6656-076656-07ERR051864
6850-046850-04ERR051865
6972-046972-04ERR051866
7039-047039-04ERR051867
7347-067347-06ERR051868
7385-997385-99ERR051869
7464-067464-06ERR051870
7535-067535-06ERR051871
7848-057848-05ERR051872
7870-077870-07ERR051873
7875-997875-99ERR051874
7898-077898-07ERR051875
8061-038061-03ERR051876
8312-058312-05ERR051877
8561-068561-06ERR051878
8571-078571-07ERR051879
8935-048935-04ERR051880
9210-069210-06ERR051881
20080087842008008784ERR051882
29_PMEN229 PMEN2ERR051883
30_PMEN330 PMEN3ERR051884
36_PMEN936 PMEN9ERR051885
41_PMEN1441 PMEN14ERR051886
42_PMEN1542 PMEN15ERR051972
BS_06BS 06ERR271785
BS_19BS 19ERR271786
BS_20BS 20ERR051973
CRO21CRO21ERR051974
CRO30CRO30ERR051975
CRO60CRO60ERR051976
CRO9CRO9ERR051887
DE_05DE 05ERR051977
DE_10DE 10ERR051978
DE_13DE 13ERR051979
DE_14DE 14ERR051980
DE_19DE 19ERR051981
DG_02DG 02ERR051982
DG_23DG 23ERR051888
DG_25DG 25ERR051889
DG_30DG 30ERR051983
DG_61DG 61ERR051984
DG_66DG 66ERR051985
DG_84DG 84ERR051890
DG_95DG 95ERR051891
DG_97DG 97ERR051892
GH_04GH 04ERR051893
MA_03MA 03ERR051986
MA_19MA 19ERR051894
MA_20MA 20ERR051987
MA_26MA 26ERR051895
S-009S-009ERR051988
S-010S-010ERR051989
S-019S-019ERR051896
S-025S-025ERR051897
S-044S-044ERR051898
S-052S-052ERR051990
S-078S-078ERR051991
S-091S-091ERR051899
S-105S-105ERR051992
S-106S-106ERR051993
S-108S-108ERR051994
S-112S-112ERR051900
S-119S-119ERR051901
S-158S-158ERR051995
S-161S-161ERR051996
S-166S-166ERR051997
S-167S-167ERR051902
S-177S-177ERR051998
S-184S-184ERR051903
S-186S-186ERR051999
S-188S-188ERR052000
SN23563SN23563ERR052047
SN28306SN28306ERR052048
SN22658SN22658ERR052049
SN26569SN26569ERR052050
SN1723SN1723ERR052051
SN205SN205ERR052052
SN20199SN20199ERR052053
SN31817SN31817ERR052054
SN32926SN32926ERR052055
SN849SN849ERR052056
SN6058SN6058ERR052057
SN3123SN3123ERR052058
SN33138SN33138ERR052059
SN26573SN26573ERR052060
SN6027SN6027ERR052061
SN145SN145ERR052062
SN43944SN43944ERR052063
SN4622SN4622ERR052064
SN1738SN1738ERR052065
SN13865SN13865ERR052066
SN590SN590ERR052067
SN5992SN5992ERR052068
SN1157SN1157ERR052069
SN1157SN1157ERR391724
SN39039SN39039ERR052070
SN39039SN39039ERR391725
SN28652SN28652ERR052071
SN28652SN28652ERR391726
SN6064SN6064ERR052072
SN6064SN6064ERR391727
SN1560SN1560ERR052073
SN1560SN1560ERR391728
SN81SN81ERR052074
SN81SN81ERR391729
SN26450SN26450ERR052075
SN26450SN26450ERR391730
SN4874SN4874ERR052076
SN4874SN4874ERR391731
SN6149SN6149ERR052077
SN6149SN6149ERR391732
SN4996SN4996ERR052078
SN4996SN4996ERR391733
SN4897SN4897ERR052079
SN4897SN4897ERR391734
SN2095SN2095ERR052080
SN2095SN2095ERR391735
SN35343SN35343ERR052081
SN35343SN35343ERR391736
SN6079SN6079ERR052082
SN6079SN6079ERR391737
SN4849SN4849ERR052083
SN4849SN4849ERR391738
SN20626SN20626ERR052084
SN20626SN20626ERR391739
SN6074SN6074ERR052085
SN6074SN6074ERR391740
SN4018SN4018ERR052086
SN4018SN4018ERR391741
SN35745SN35745ERR052087
SN35745SN35745ERR391742
SN6204SN6204ERR052088
SN6204SN6204ERR391743
SN6051SN6051ERR052089
SN6051SN6051ERR391744
SN4691SN4691ERR052090
SN4691SN4691ERR391745
SN23085SN23085ERR052134
SN23085SN23085ERR052091
SN4796SN4796ERR052135
SN4796SN4796ERR052092
SN6141SN6141ERR052093
SN6141SN6141ERR052136
SN30030SN30030ERR052094
SN30030SN30030ERR052137
SN4439SN4439ERR052095
SN4439SN4439ERR052138
SN556SN556ERR052096
SN556SN556ERR052139
SN649SN649ERR052097
SN649SN649ERR052140
SN27474SN27474ERR052098
SN27474SN27474ERR052141
SN6006SN6006ERR052099
SN6006SN6006ERR052142
SN7SN7ERR052143
SN7SN7ERR052100
SN1484SN1484ERR052144
SN1484SN1484ERR052101
SN20625SN20625ERR052145
SN20625SN20625ERR052102
SN36109SN36109ERR052146
SN36109SN36109ERR052103
SN23020SN23020ERR052147
SN23020SN23020ERR052104
SN23088SN23088ERR052148
SN23088SN23088ERR052105
SN4553SN4553ERR052106
SN4553SN4553ERR052149
SN1134SN1134ERR052107
SN1134SN1134ERR052150
SN4822SN4822ERR052108
SN4822SN4822ERR052151
SN23212SN23212ERR052109
SN23212SN23212ERR052152
SN8949SN8949ERR052110
SN8949SN8949ERR052153
SN6091SN6091ERR052111
SN6091SN6091ERR052154
SN115SN115ERR052112
SN115SN115ERR052155
SN1760SN1760ERR052113
SN4013SN4013ERR052114
SN41911SN41911ERR052115
SN39533SN39533ERR052116
SN4151SN4151ERR052117
SN1684SN1684ERR052118
SN5025SN5025ERR052119
SN11907SN11907ERR052120
SN11905SN11905ERR052121
SN6166SN6166ERR052122
SN11908SN11908ERR052123
SN22894SN22894ERR052124
SN26752SN26752ERR052125
SN36255SN36255ERR052126
SN6129SN6129ERR052127
SN268SN268ERR052128
SN156SN156ERR052129
SN6185SN6185ERR052130
SN13060SN13060ERR052131
SN11306SN11306ERR052132
SN5988SN5988ERR052133
SN11903UnknownERR052156
SN20042UnknownERR052157
SN20085UnknownERR052158
SN20125UnknownERR052159
SN20126UnknownERR052160
SN20151UnknownERR052161
SN20183UnknownERR052162
SN20310UnknownERR052163
SN20312UnknownERR052164
SN20340UnknownERR052165
SN20407UnknownERR052166
SN20603UnknownERR052167
SN20612UnknownERR052168
SN20613UnknownERR052169
SN20628UnknownERR052170
SN20634UnknownERR052171
SN20636UnknownERR052172
SN20637UnknownERR052173
SN20647UnknownERR052174
SN20648UnknownERR052175
SN20660UnknownERR052176
SN20661UnknownERR052177
SN20662UnknownERR052178
SN20714UnknownERR052179
SN20816UnknownERR052180
SN20869UnknownERR052181
SN20871UnknownERR052182
SN20873UnknownERR052183
SN20881UnknownERR052184
SN21124UnknownERR052185
SN21137UnknownERR052186
SN21148UnknownERR052187
SN21161UnknownERR052188
SN21393UnknownERR052189
SN21419UnknownERR052190
SN21494UnknownERR052191
SN21602UnknownERR052192
SN21650UnknownERR052193
SN21792UnknownERR052194
SN21830UnknownERR052195
SN21865UnknownERR052196
SN22138UnknownERR052197
SN22141UnknownERR052198
SN22149UnknownERR052199
SN22151UnknownERR052200
SN22152UnknownERR052201
SN22188UnknownERR052202
SN22344UnknownERR052203
SN22352UnknownERR052204
SN22354UnknownERR052205
SN22359UnknownERR052206
SN22360UnknownERR052207
SN22540UnknownERR052208
SN22557UnknownERR052209
SN22582UnknownERR052210
SN22601UnknownERR052211
SN22608UnknownERR052212
SN22635UnknownERR052213
SN22642UnknownERR052214
SN22660UnknownERR052215
SN22666UnknownERR052216
SN22677UnknownERR052217
SN22686UnknownERR052218
SN22698UnknownERR052219
SN22720UnknownERR052220
SN22794UnknownERR052221
SN22810UnknownERR052222
SN22811UnknownERR052223
SN22826UnknownERR052224
SN22875UnknownERR052225
SN22876UnknownERR052226
SN22878UnknownERR052227
SN22879UnknownERR052228
SN22880UnknownERR052229
SN22882UnknownERR052230
SN22955UnknownERR052231
SN22956UnknownERR052232
SN23032UnknownERR052233
SN23049UnknownERR052234
SN23073UnknownERR052235
SN23312UnknownERR052236
SN23318UnknownERR052237
SN23362UnknownERR052238
SN23565UnknownERR052239
SN23571UnknownERR052240
SN23700UnknownERR052241
SN23956UnknownERR052242
SN24073UnknownERR052243
SN24074UnknownERR052244
SN26230UnknownERR052245
SN26231UnknownERR052246
4038UnknownERR052247
4039UnknownERR052248
SN22678UnknownERR052475
SN26272UnknownERR052476
SN26290UnknownERR052477
SN26412UnknownERR052478
SN26413UnknownERR052479
SN26436UnknownERR052480
SN26444UnknownERR052481
SN26530UnknownERR052482
SN26571UnknownERR052483
SN26591UnknownERR052484
SN26675UnknownERR052485
SN26677UnknownERR052486
SN26678UnknownERR052487
SN26747UnknownERR052488
SN26782UnknownERR052489
SN26792UnknownERR052490
SN26808UnknownERR052491
SN26818UnknownERR052492
SN26828UnknownERR052493
SN26861UnknownERR052494
SN26863UnknownERR052495
SN26876UnknownERR052496
SN26884UnknownERR052497
SN26993UnknownERR052498
SN27041UnknownERR052297
SN27071UnknownERR052298
SN27072UnknownERR052299
SN27110UnknownERR052300
SN27111UnknownERR052301
SN27402UnknownERR052302
SN27457UnknownERR052303
SN27467UnknownERR052304
SN27518UnknownERR052305
SN27556UnknownERR052306
SN27673UnknownERR052307
SN27684UnknownERR052308
SN27815UnknownERR052309
SN27818UnknownERR052310
SN27857UnknownERR052311
SN27903UnknownERR052312
SN28019UnknownERR052313
SN28054UnknownERR052314
SN28129UnknownERR052315
SN28162UnknownERR052316
SN28177UnknownERR052317
SN28222UnknownERR052318
SN28230UnknownERR052319
SN28293UnknownERR052320
SN28419UnknownERR052342
SN28421UnknownERR052343
SN28481UnknownERR052344
SN28493UnknownERR052345
SN28582UnknownERR052346
SN28685UnknownERR052347
SN28699UnknownERR052348
SN28722UnknownERR052349
SN28777UnknownERR052350
SN28796UnknownERR052351
SN28797UnknownERR052352
SN28854UnknownERR052353
SN28890UnknownERR052354
SN28905UnknownERR052355
SN28918UnknownERR052356
SN28923UnknownERR052357
SN28974UnknownERR052358
SN28994UnknownERR052359
SN29738UnknownERR052360
SN29754UnknownERR052361
SN29770UnknownERR052362
SN29791UnknownERR052363
SN29798UnknownERR052364
SN29801UnknownERR052365
SN29943UnknownERR052366
SN29948UnknownERR052367
SN30590UnknownERR052368
SN31062UnknownERR052369
SN31137UnknownERR052370
SN31283UnknownERR052371
SN31318UnknownERR052372
SN31332UnknownERR052373
SN31383UnknownERR052374
SN31505UnknownERR052375
SN31578UnknownERR052376
SN31579UnknownERR052377
SN31580UnknownERR052378
SN31960UnknownERR052379
SN32425UnknownERR052380
SN32567UnknownERR052381
SN32667UnknownERR052382
SN32775UnknownERR052383
SN32822UnknownERR052384
SN32965UnknownERR052385
SN33000UnknownERR052386
SN33065UnknownERR052387
SN33147UnknownERR052388
SN33211UnknownERR052389
SPWT1SPWT1ERR052273
SPWT2SPWT2ERR052274
SPWT3SPWT3ERR052275
SPWT4SPWT4ERR052276
SPWT5SPWT5ERR052277
SPWT6SPWT6ERR052278
SPWT7SPWT7ERR052279
SPWT8SPWT8ERR052280
SPWT9SPWT9ERR052281
SPWT10SPWT10ERR052282
SPWT11SPWT11ERR052283
SPWT12SPWT12ERR052284
SPWT13SPWT13ERR052285
SPWT14SPWT14ERR052286
SPWT15SPWT15ERR052287
SPWT16SPWT16ERR052288
SPWT17SPWT17ERR052289
SPWT18SPWT18ERR052290
SPWT19SPWT19ERR052291
SPWT20SPWT20ERR052292
SPWT21SPWT21ERR052293
SPWT22SPWT22ERR052294
SPWT23SPWT23ERR052295
SPWT24SPWT24ERR052296
SPHB1SPHB1ERR052249
SPHB2SPHB2ERR052250
SPHB3SPHB3ERR052251
SPHB4SPHB4ERR052252
SPHB5SPHB5ERR052253
SPHB6SPHB6ERR052254
SPHB7SPHB7ERR052255
SPHB8SPHB8ERR052256
SPHB9SPHB9ERR052257
SPHB10SPHB10ERR052258
SPHB11SPHB11ERR052259
SPHB12SPHB12ERR052260
SPHB13SPHB13ERR052261
SPHB14SPHB14ERR052262
SPHB15SPHB15ERR052263
SPHB16SPHB16ERR052264
SPHB17SPHB17ERR052265
SPHB18SPHB18ERR052266
SPHB19SPHB19ERR052267
SPHB20SPHB20ERR052268
SPHB21SPHB21ERR052269
SPHB22SPHB22ERR052270
SPHB23SPHB23ERR052271
SPHB24SPHB24ERR052272
DCC1524ST273ERR052390
DCC1738ST273ERR052391
DCC1902ST273ERR052392
PT1175ST273ERR052393
PT3536ST273ERR052394
PT1430ST273ERR052395
PT582ST273ERR052396
PT76ST273ERR052397
PT2236ST90ERR052398
PT3104ST90ERR052399
DCC2613ST90ERR052400
DCC2623ST90ERR052401
PT3026ST895ERR052402
PT1683ST156ERR052403
PT2807ST893ERR052404
PT2737ST143ERR052405
PT3291ST143ERR052406
PT3626ST143ERR052407
PT1570ST156ERR052408
DCC2508ST156ERR052409
PT338ST156ERR052410
PT2729_7ST156ERR052411
PT5424ST557ERR052412
PT6251ST557ERR052413
PT6282ST4585ERR052414
PT5825ST5219ERR052415
PT5842ST5219ERR052416
PT5858ST5219ERR052417
PT4140ST162ERR052418
PT2533ST162ERR052419
PT494ST162ERR052420
DCC1875ST9ERR052421
PT952ST9ERR052422
PT356ST9ERR052423
PT5761ST9ERR052424
DCC134ST15ERR052425
DCC1698ST15ERR052426
WL_355ST15ERR052427
PT3451ST15ERR052428
PT3438ST15ERR052429
PT814ST202ERR052430
WL_845ST236ERR052431
PT390ST242ERR052432
SPN3347933479ERR271787
SPN3444234442ERR271788
SPN3556335563ERR271789
SPN4420944209ERR271790
SPN3343033430ERR271791
SPN83328332ERR271792
SPN46834683ERR271793
SPN48394839ERR271794
SPN75887588ERR271795
SPN825825ERR271796
SPN10691069ERR271797
SPN11471147ERR271798
SPN17441744ERR271799
SPN75867586ERR271800
SPN76677667ERR271801
SPN892892ERR271802
SPN919919ERR271803
SPN17331733ERR271804
SPN30753075ERR271805
SPN40894089ERR271806
SPN47974797ERR271807
SPN338338ERR271808
SPN742742ERR052321
SPN726726ERR052322
SPN792792ERR052323
SPN772772ERR052324
SPN34023402ERR052325
SPN11101110ERR052326
SPN82068206ERR052327
SPN54415441ERR052328
SPN456456ERR052329
SPN485485ERR052330
SPN29062906ERR052331
SPN47054705ERR052332
SPN91809180ERR052333
SPN91889188ERR052334
SPN91939193ERR052335
SPN92689268ERR052336
SPN94049404ERR052337
SPN94249424ERR052338
SPN96719671ERR052339
SPN1186411864ERR052340
SPN1186911869ERR052341
SPN1187011870ERR052433
SPN1187111871ERR052434
SPN1187811878ERR052435
SPN1188611886ERR052436
SPN1190011900ERR052437
SPN1192611926ERR052438
SPN1315113151ERR052439
SPN1352213522ERR052440
SPN1363313633ERR052441
SPN1984619846ERR052442
SPN2029820298ERR052443
SPN2030420304ERR052444
SPN2065720657ERR052445
SPN2086520865ERR052446
SPN2087720877ERR052447
SPN2178521785ERR052448
SPN2257322573ERR052449
SPN2257722577ERR052450
SPN2257922579ERR052451
SPN2266422664ERR052452
SPN2272122721ERR052453
SPN2275722757ERR052454
SPN2276422764ERR052455
SPN2280922809ERR052456
SPN2283622836ERR052457
SPN2299722997ERR052458
SPN2303323033ERR052459
SPN2306623066ERR052460
SPN10061006ERR052461
SPN83278327ERR052462
SPN10391039ERR052463
SPN40004000ERR052464
SPN44884488ERR052465
SPN48764876ERR052466
SPN49014901ERR052467
SPN11171117ERR052468
SPN82148214ERR052469
SPN60626062ERR052470
SPN61596159ERR052471
SPN59765976ERR052472
SPN05-00805-008ERR052473
SPN20532053ERR052474
SA39UnknownERR108697
SA40UnknownERR108698
SA41UnknownERR108699
SA42UnknownERR108700
SA43UnknownERR108701
SA44UnknownERR108702
SA45UnknownERR108703
SA47UnknownERR108704
SA48UnknownERR108705
SA49UnknownERR108706
SA50UnknownERR108707
SA52UnknownERR108708
SA53UnknownERR108709
SA54UnknownERR108710
SA55UnknownERR108711
SA58UnknownERR108712
SA59UnknownERR108713
SA60UnknownERR108714
SA62UnknownERR108715
SA63UnknownERR108716
SA65UnknownERR108717
SA67UnknownERR108718
SA68UnknownERR108719
SA71UnknownERR108720
SA74UnknownERR108721
SA75UnknownERR108722
SA79UnknownERR108723
SA80UnknownERR108724
SA82UnknownERR108725
SA83UnknownERR108726
SA84UnknownERR108727
SA85UnknownERR108728
SA86UnknownERR108729
SA88UnknownERR108730
SA89UnknownERR108731
SA91UnknownERR108732
SA94UnknownERR108733
SA96UnknownERR108734
SA97UnknownERR108735
SA100UnknownERR108736
SA102UnknownERR108737
SA104UnknownERR108738
SA105UnknownERR108739
SA109UnknownERR108740
SA110UnknownERR108741
SA111UnknownERR108742
SA113UnknownERR108743
SA114UnknownERR108744
SA115UnknownERR108745
SA118UnknownERR108746
SA119UnknownERR108747
SA120UnknownERR108748
SA121UnknownERR108749
SA122UnknownERR108750
SA123UnknownERR108751
SA125UnknownERR108752
SA127UnknownERR108753
SA128UnknownERR108754
SA129UnknownERR108755
SA133UnknownERR108756
SA135UnknownERR108757
SA136UnknownERR108758
SA137UnknownERR108759
SA138UnknownERR108760
SA139UnknownERR108761
9511_06158UnknownERR107482
9512_07034UnknownERR107483
9601_30166UnknownERR107484
9602_15128UnknownERR107485
9603_12093UnknownERR107486
9605_07141UnknownERR107487
9606_18106UnknownERR107488
9607_10105UnknownERR107489
9608_02116UnknownERR107490
9609_24019UnknownERR107491
9611_04103UnknownERR107492
9612_28032UnknownERR107493
9701_10122UnknownERR107494
9702_03174UnknownERR107495
9703_24150UnknownERR107496
9705_05087UnknownERR107497
9706_10167UnknownERR107498
9707_14101UnknownERR107499
9708_26128UnknownERR107500
9711_04135UnknownERR107501
9712_30001UnknownERR107502
9801_23240UnknownERR107503
9802_26112UnknownERR107504
9803_09178UnknownERR107505
9806_08086UnknownERR107506
9807_09096UnknownERR107507
9808_20015UnknownERR107508
9809_25147UnknownERR107509
9811_05053UnknownERR107510
9812_11187UnknownERR107511
9901_13020UnknownERR107512
9903_09147UnknownERR107513
9905_21046UnknownERR107514
9906_15160UnknownERR107515
9907_14172UnknownERR107516
9908_13028UnknownERR107517
9909_21117UnknownERR107518
9911_18139UnknownERR107519
9912_17151UnknownERR107520
0001_05003UnknownERR107521
0002_03098UnknownERR107522
0003_13150UnknownERR107523
0005_24045UnknownERR107524
0006_20010UnknownERR107525
0007_13036UnknownERR107526
0008_28098UnknownERR107527
0009_01095UnknownERR107528
0011_09030UnknownERR107529
0012_25031UnknownERR107530
0101_26271UnknownERR107531
0102_01171UnknownERR107532
0105_29173UnknownERR107533
0106_11154UnknownERR107534
0108_03050UnknownERR107535
0109_28217UnknownERR107536
0111_21110UnknownERR107537
0112_27129UnknownERR107538
0202_01134UnknownERR107539
0203_19212UnknownERR107540
0205_05018UnknownERR107541
0206_21189UnknownERR107542
0207_15090UnknownERR107543
0208_13020UnknownERR107544
0209_24059UnknownERR107545
0211_13275UnknownERR107546
0212_05159UnknownERR107547
0301_23540UnknownERR107548
0302_20271UnknownERR107549
0303_13263UnknownERR107550
0306_13142UnknownERR107551
0307_16209UnknownERR107552
0308_18185UnknownERR107553
0309_03220UnknownERR107554
0310_03156UnknownERR107555
0312_05169UnknownERR107556
0401_02194UnknownERR107557
0402_15047UnknownERR107558
0405_28130UnknownERR107559
0406_09202UnknownERR107560
0407_30157UnknownERR107561
0409_02133UnknownERR107562
0412_17021UnknownERR107563
0501_31089UnknownERR107564
0502_25231UnknownERR107565
0503_03063UnknownERR107566
0505_04001UnknownERR107567
0506_29167UnknownERR107568
0507_08068UnknownERR107569
0508_26122UnknownERR107570
0509_09128UnknownERR107571
0107_17127UnknownERR107572
SA15UnknownERR108696

Population structure and diversity in non-encapsulated Streptococcus pneumoniae

Sample

Strain

Run Accession

0103UnknownERR097350
0104UnknownERR097351
0106UnknownERR097352
0107UnknownERR097353
0119UnknownERR097354
0121UnknownERR097355
0122UnknownERR097356
0123UnknownERR097357
0127UnknownERR097358
0128UnknownERR097359
0139UnknownERR097360
0140UnknownERR097361
0141UnknownERR097278
0142UnknownERR097279
0143UnknownERR097280
0144UnknownERR097281
0145UnknownERR097282
0146UnknownERR097283
0148UnknownERR097284
0149UnknownERR097285
0151UnknownERR097286
0152UnknownERR097287
0154UnknownERR097288
0155UnknownERR097289
0157UnknownERR097290
0158UnknownERR097291
0160UnknownERR097292
0161UnknownERR097293
0164UnknownERR097294
0165UnknownERR097295
0167UnknownERR097296
0170UnknownERR097297
0173UnknownERR097298
0175UnknownERR097299
0176UnknownERR097300
0178UnknownERR097301
0179UnknownERR097302
0203UnknownERR097303
0204UnknownERR097304
0205UnknownERR097305
0206UnknownERR097306
0207UnknownERR097307
0208UnknownERR097308
0209UnknownERR097309
0211UnknownERR097310
0212UnknownERR097311
0216UnknownERR097312
0231UnknownERR097313
0232UnknownERR097314
0233UnknownERR097315
0238UnknownERR097316
0239UnknownERR097317
0240UnknownERR097318
0246UnknownERR097319
0247UnknownERR097320
0252UnknownERR097321
0253UnknownERR097322
0254UnknownERR097323
0256UnknownERR097324
0258UnknownERR097325
0260UnknownERR403444
0264UnknownERR403445
0265UnknownERR403446
0267UnknownERR403447
0268UnknownERR403448
0269UnknownERR403449
0270UnknownERR403450
0272UnknownERR403451
0273UnknownERR403452
0274UnknownERR403453
0275UnknownERR403454
0276UnknownERR403455
0277UnknownERR097326
0278UnknownERR097327
0279UnknownERR097328
0280UnknownERR097329
0301UnknownERR097330
0302UnknownERR097331
0303UnknownERR097332
0304UnknownERR097333
0305UnknownERR097334
0306UnknownERR097335
0307UnknownERR097336
0308UnknownERR097337
0309UnknownERR097338
0310UnknownERR097339
0311UnknownERR097340
0312UnknownERR097341
0313UnknownERR097342
0314UnknownERR097343
0315UnknownERR097344
0326UnknownERR097345
0329UnknownERR097346
0338UnknownERR097347
0339UnknownERR097348
0340UnknownERR097349
0341UnknownERR097233
0342UnknownERR097234
0344UnknownERR097235
0356UnknownERR097236
0357UnknownERR097237
0362UnknownERR097238
0366UnknownERR097239
0368UnknownERR097240
0369UnknownERR097241
0372UnknownERR097242
0373UnknownERR097243
0374UnknownERR097244
0375UnknownERR097245
0376UnknownERR097246
0378UnknownERR097247
0379UnknownERR097248
0380UnknownERR097249
0381UnknownERR097250
16180UnknownERR097251
16188UnknownERR097252
16287UnknownERR097253
32005UnknownERR097254
16077UnknownERR097255
30638UnknownERR097256
30949UnknownERR097257
30973UnknownERR097258
20061UnknownERR097259
208_80UnknownERR097260
207_63UnknownERR097261
101_43UnknownERR097262
104_58UnknownERR097263
104_72UnknownERR097264
106_44UnknownERR097265
111_81UnknownERR097266
202_66UnknownERR097267
203_15UnknownERR097268
205_09UnknownERR097269
208_15UnknownERR097270
FRV026UnknownERR097271
FRV016UnknownERR097272
287_ChinaUnknownERR097273
410_05UnknownERR097274
208_56UnknownERR097275
3308_46UnknownERR097276
3003_06UnknownERR097277
1688s40402-063 (ST448)ERR097362
1688s40507-047 (ST448)ERR097363
1688s4063015 (ST448)ERR097364
1688s407NP7236 (ST344)ERR097365
1688s408LE4251 (ST448)ERR097366
1688s409BR1285 (ST448)ERR097367
1688s410NP7287 (ST448)ERR097368
08b0060408b00604ERR097369
08b1077208b10772ERR097370
08b0308408b03084ERR097371
08b0232008b02320ERR097372
08b0122708b01227ERR097373
1855618556ERR097374
1803718037ERR097375
1857218572ERR097376
30923092ERR097377
1877518775ERR097378
1779317793ERR097379
W01320W01320ERR097380
1851918519ERR097381
58405840ERR097382
1826018260ERR097383
1852818528ERR097384
1881418814ERR097385
W01272W01272ERR097386
W01454W01454ERR097387
W01659W01659ERR097388
W01854W01854ERR097389
W00857W00857ERR097390
1873718737ERR097391
10101010ERR097392
DCC98-1784UnknownERR097402
DCC99-2806UnknownERR097403
DCC96-146UnknownERR097404
DCC96-120UnknownERR097405
DCC96-26UnknownERR097406
DCC96-2763UnknownERR097407
501_24UnknownERR097408
501_14UnknownERR097409
501_20UnknownERR097410
501_30UnknownERR097411
109_44UnknownERR097412
409_63UnknownERR097413
409_64UnknownERR097414
MCIA6DUnknownERR097415
6DUnknownERR097416
36KUnknownERR097417
7JUnknownERR097418
MC1UnknownERR097419
MC2UnknownERR097420
195UnknownERR097421
297UnknownERR097422
0145bUnknownERR097423
0231bUnknownERR097424
0232bUnknownERR097425
0339bUnknownERR097426
0149bUnknownERR097427
0152bUnknownERR097428
0170bUnknownERR097429
0212bUnknownERR097430
0216bUnknownERR097431
0209bUnknownERR097432
0211bUnknownERR097433
0369bUnknownERR097434

Streptococcus pneumoniae evolution and population structure during longitudinal sampling in a defined human population

Sample

Strain

Run Accession

SMRU1NTERR039560
SMRU2NTERR039561
SMRU3NTERR039562
SMRU410AERR039563
SMRU5NTERR039564
SMRU67BERR039565
SMRU77BERR039566
SMRU8NTERR039567
SMRU9NTERR039568
SMRU1033CERR039569
SMRU11NTERR039570
SMRU12NTERR039571
SMRU136BERR039572
SMRU1410AERR039573
SMRU156BERR039574
SMRU16NTERR039575
SMRU1748ERR039576
SMRU186AERR039577
SMRU1919BERR039578
SMRU20NTERR039579
SMRU2135FERR039580
SMRU22NTERR039581
SMRU2335FERR039582
SMRU24NTERR039583
SMRU25NTERR039584
SMRU2617FERR039585
SMRU277FERR039586
SMRU286CERR039587
SMRU2948ERR039588
SMRU3023AERR039589
SMRU316CERR039590
SMRU326AERR039591
SMRU33NTERR039592
SMRU34NTERR039593
SMRU3519BERR039594
SMRU36NTERR039595
SMRU3733CERR039596
SMRU3835FERR039597
SMRU3919BERR039598
SMRU40NTERR039599
SMRU4122FERR039600
SMRU4219AERR039601
SMRU4313ERR039602
SMRU4419AERR039603
SMRU456AERR039604
SMRU46NTERR039605
SMRU4723AERR039606
SMRU4823AERR039607
SMRU49NTERR039608
SMRU506CERR039609
SMRU51NTERR039610
SMRU526AERR039611
SMRU5332AERR039612
SMRU5433DERR039613
SMRU55NTERR039614
SMRU56NTERR039615
SMRU577BERR039616
SMRU5815BERR039617
SMRU59NTERR039618
SMRU6011AERR039619
SMRU6111AERR039620
SMRU6217FERR039621
SMRU6334ERR039622
SMRU64NTERR039623
SMRU6514ERR039624
SMRU66NTERR039625
SMRU67NTERR039626
SMRU6823BERR039627
SMRU6923BERR039628
SMRU706CERR039629
SMRU71NTERR039630
SMRU72NTERR039631
SMRU7313ERR039632
SMRU7419FERR039633
SMRU7511AERR039634
SMRU7623FERR039635
SMRU7714ERR039636
SMRU7819BERR039637
SMRU7914ERR039638
SMRU8019BERR039639
SMRU81NTERR039640
SMRU8210BERR039641
SMRU8310BERR039642
SMRU8411AERR039643
SMRU85NTERR039644
SMRU861ERR039645
SMRU8735FERR039646
SMRU8819FERR039647
SMRU89NTERR039648
SMRU90NTERR039649
SMRU918ERR039650
SMRU92NTERR039651
SMRU9317FERR039652
SMRU9414ERR039653
SMRU9519FERR039654
SMRU9616FERR039655
SMRU9710BERR047894
SMRU984ERR047895
SMRU99NTERR047896
SMRU100NTERR047897
SMRU10124AERR047898
SMRU102NTERR047899
SMRU10319FERR047900
SMRU104NTERR047901
SMRU10519AERR047902
SMRU10635FERR047903
SMRU10735FERR047904
SMRU10822FERR047905
SMRU1094ERR047906
SMRU11021ERR047907
SMRU1114ERR047908
SMRU11233BERR047909
SMRU11323AERR047910
SMRU11419AERR047911
SMRU11535FERR047912
SMRU116NTERR047913
SMRU1172ERR047914
SMRU11833DERR047915
SMRU11922FERR047916
SMRU12015BERR047917
SMRU121NTERR047918
SMRU12219FERR047919
SMRU12328FERR047920
SMRU124NTERR047921
SMRU125NTERR047922
SMRU126NTERR047923
SMRU12715BERR047924
SMRU1283ERR047925
SMRU12920ERR047926
SMRU130NTERR047927
SMRU13119FERR047928
SMRU132NTERR047929
SMRU1336BERR047930
SMRU13414ERR047931
SMRU13514ERR047932
SMRU136NTERR047933
SMRU13723AERR047934
SMRU13823FERR047935
SMRU13928FERR047936
SMRU14028FERR047937
SMRU14132AERR047938
SMRU14219BERR047939
SMRU143NTERR047940
SMRU14428FERR047941
SMRU14532AERR049079
SMRU14628FERR049080
SMRU14714ERR049081
SMRU148NTERR049082
SMRU14933BERR049083
SMRU150NTERR049084
SMRU15123FERR049085
SMRU152NTERR049086
SMRU15323FERR049087
SMRU154NTERR049088
SMRU15546ERR049089
SMRU15635FERR049090
SMRU15733BERR049091
SMRU158NTERR049092
SMRU159NTERR049093
SMRU16010BERR049094
SMRU161NTERR049095
SMRU16235FERR049096
SMRU16319FERR049097
SMRU1644ERR049098
SMRU16510BERR049099
SMRU16615BERR049100
SMRU16735FERR049101
SMRU1686BERR049102
SMRU169NTERR049103
SMRU17023FERR049104
SMRU17134ERR049105
SMRU17217FERR049106
SMRU17311AERR049107
SMRU1743ERR049108
SMRU175NTERR049109
SMRU17614ERR049110
SMRU177NTERR049111
SMRU1786BERR049112
SMRU179NTERR049113
SMRU18040ERR049114
SMRU18110BERR049115
SMRU182NTERR049116
SMRU18311AERR049117
SMRU184NTERR049118
SMRU185NTERR049119
SMRU1864ERR049120
SMRU18719AERR049121
SMRU18822AERR049122
SMRU189NTERR049123
SMRU1906CERR049124
SMRU191NTERR049125
SMRU19223AERR049126
SMRU19323FERR050056
SMRU19419FERR050057
SMRU19537ERR050058
SMRU1963ERR050059
SMRU19721ERR050060
SMRU19823AERR050061
SMRU19911AERR050062
SMRU20011AERR050063
SMRU20132AERR050064
SMRU202NTERR050065
SMRU20319AERR050066
SMRU204NTERR050067
SMRU20514ERR050068
SMRU20646ERR050069
SMRU2073ERR050070
SMRU2087FERR050071
SMRU209NTERR050072
SMRU21023FERR050073
SMRU21115BERR050074
SMRU2126AERR050075
SMRU213NTERR050076
SMRU21416FERR050077
SMRU21528FERR050078
SMRU21628FERR050079
SMRU21720ERR049936
SMRU218NTERR049937
SMRU219NTERR049938
SMRU220NTERR049939
SMRU221NTERR049940
SMRU2223ERR049941
SMRU22314ERR049942
SMRU2246BERR049943
SMRU2256CERR049944
SMRU22623AERR049945
SMRU22732AERR049946
SMRU22814ERR049947
SMRU2296BERR049948
SMRU230NTERR049949
SMRU23123FERR049950
SMRU232NTERR049951
SMRU23319AERR049952
SMRU2349VERR049953
SMRU23519FERR049954
SMRU23620ERR049955
SMRU237NTERR049956
SMRU2389VERR049957
SMRU23933BERR049958
SMRU24032AERR049959
SMRU24128FERR052578
SMRU242NTERR052579
SMRU24346ERR052580
SMRU24423FERR052581
SMRU24533CERR052582
SMRU24623FERR052583
SMRU2474ERR052584
SMRU248NTERR052585
SMRU24911AERR052586
SMRU25010AERR052587
SMRU25135FERR052588
SMRU25234ERR052589
SMRU25323FERR052590
SMRU2543ERR052591
SMRU25533BERR052592
SMRU25614ERR052593
SMRU257NTERR052594
SMRU25834ERR052595
SMRU25919FERR052596
SMRU26019FERR052597
SMRU261NTERR052598
SMRU26235FERR052599
SMRU26316FERR052600
SMRU264NTERR052601
SMRU26535FERR047942
SMRU266NTERR047943
SMRU26723FERR047944
SMRU268NTERR047945
SMRU2694ERR047946
SMRU27014ERR047947
SMRU27111AERR047948
SMRU27211AERR047949
SMRU2736BERR047950
SMRU2746BERR047951
SMRU27523AERR047952
SMRU2763ERR047953
SMRU277NTERR047954
SMRU278NTERR047955
SMRU2796BERR047956
SMRU28014ERR047957
SMRU28119AERR047958
SMRU2825ERR047959
SMRU283NTERR047960
SMRU284NTERR047961
SMRU28519BERR047962
SMRU28619AERR047963
SMRU28733CERR047964
SMRU288NTERR047965
SMRU28916FERR047966
SMRU2906BERR047967
SMRU29122AERR047968
SMRU29240ERR047969
SMRU2933ERR047970
SMRU2943ERR047971
SMRU29514ERR047972
SMRU29611AERR047973
SMRU29711AERR047974
SMRU29833BERR047975
SMRU2995ERR047976
SMRU3006BERR047977
SMRU301NTERR047978
SMRU30233DERR047979
SMRU30323FERR047980
SMRU304NTERR047981
SMRU30514ERR047982
SMRU306NTERR047983
SMRU3077FERR047984
SMRU308NTERR047985
SMRU30915AERR047986
SMRU31010BERR047987
SMRU31110BERR047988
SMRU3124ERR047989
SMRU31346ERR048038
SMRU314NTERR048039
SMRU3156AERR048040
SMRU3166BERR048041
SMRU31715AERR048042
SMRU318NTERR048043
SMRU31914ERR048044
SMRU32023AERR048045
SMRU32123FERR048046
SMRU32232AERR048047
SMRU32314ERR048048
SMRU32414ERR048049
SMRU32522AERR048050
SMRU32615AERR048051
SMRU32733CERR048052
SMRU328NTERR048053
SMRU32934ERR048054
SMRU33032FERR048055
SMRU3319VERR048056
SMRU33233DERR048057
SMRU333NTERR048058
SMRU334NTERR048059
SMRU3356BERR048060
SMRU336NTERR048061
SMRU33716FERR048062
SMRU3383ERR048063
SMRU3391ERR048064
SMRU34035FERR048065
SMRU34137ERR048066
SMRU3424ERR048067
SMRU3436BERR048068
SMRU344NTERR048069
SMRU345NTERR048070
SMRU346NTERR048071
SMRU347NTERR048072
SMRU348NTERR048073
SMRU34935FERR048074
SMRU350NTERR048075
SMRU3513ERR048076
SMRU35235CERR048077
SMRU35334ERR048078
SMRU3543ERR048079
SMRU35514ERR048080
SMRU3568ERR048081
SMRU35735FERR048082
SMRU358NTERR048083
SMRU35923AERR048084
SMRU36014ERR048085
SMRU3616BERR047990
SMRU3626BERR047991
SMRU36319FERR047992
SMRU3643ERR047993
SMRU36515BERR047994
SMRU36619FERR047995
SMRU3676BERR047996
SMRU3686BERR047997
SMRU3696BERR047998
SMRU37019BERR047999
SMRU37123FERR048000
SMRU372NTERR048001
SMRU37315AERR048002
SMRU3743ERR048003
SMRU37535FERR048004
SMRU3763ERR048005
SMRU377NTERR048006
SMRU37823FERR048007
SMRU37911AERR048008
SMRU3806CERR048009
SMRU38119BERR048010
SMRU38219FERR048011
SMRU383NTERR048012
SMRU3846AERR048013
SMRU38516FERR048014
SMRU3866AERR048015
SMRU38733BERR048016
SMRU38835CERR048017
SMRU389NTERR048018
SMRU39037ERR048019
SMRU391NTERR048020
SMRU39235FERR048021
SMRU3936BERR048022
SMRU39410BERR048023
SMRU3954ERR048024
SMRU39623FERR048025
SMRU397NTERR048026
SMRU39819FERR048027
SMRU39934ERR048028
SMRU40015BERR048029
SMRU40134ERR048030
SMRU40214ERR048031
SMRU403NTERR048032
SMRU404NTERR048033
SMRU4054ERR048034
SMRU40615BERR048035
SMRU407NTERR048036
SMRU40814ERR048037
SMRU4096BERR048086
SMRU41023FERR048087
SMRU41118AERR048088
SMRU41219BERR048089
SMRU41314ERR048090
SMRU414NTERR048091
SMRU41510BERR048092
SMRU41632FERR048093
SMRU417NTERR048094
SMRU4186BERR048095
SMRU419NTERR048096
SMRU420NTERR048097
SMRU42123FERR048098
SMRU42232AERR048099
SMRU42323FERR048100
SMRU424NTERR048101
SMRU42515BERR048102
SMRU426NTERR048103
SMRU4277FERR048104
SMRU42810AERR048105
SMRU42910FERR048106
SMRU430NTERR048107
SMRU43119BERR048108
SMRU43217FERR048109
SMRU4336AERR048110
SMRU434NTERR048111
SMRU43514ERR048112
SMRU43623AERR048113
SMRU437NTERR048114
SMRU43819FERR048115
SMRU4393ERR048116
SMRU4407FERR048117
SMRU441NTERR048118
SMRU44216FERR048119
SMRU4439VERR048120
SMRU4446BERR048121
SMRU44510BERR048122
SMRU44614ERR048123
SMRU44723FERR048124
SMRU44813ERR048125
SMRU44934ERR048126
SMRU45015BERR048127
SMRU451NTERR048128
SMRU45220ERR048129
SMRU45311AERR048130
SMRU454NTERR048131
SMRU45523BERR048132
SMRU45635CERR048133
SMRU4576BERR048134
SMRU458NTERR048135
SMRU45914ERR048136
SMRU46019BERR048137
SMRU46114ERR048138
SMRU4625ERR048139
SMRU4635ERR048140
SMRU46433BERR048141
SMRU46528FERR048142
SMRU46614ERR048143
SMRU46721ERR048144
SMRU46815AERR048145
SMRU46918CERR048146
SMRU47014ERR048147
SMRU47114ERR048148
SMRU47223FERR048149
SMRU47337ERR048150
SMRU47434ERR048151
SMRU47511AERR048152
SMRU476NTERR048153
SMRU47719FERR048154
SMRU47814ERR048155
SMRU4796BERR048156
SMRU480NTERR048157
SMRU48114ERR048158
SMRU48214ERR048159
SMRU4839VERR048160
SMRU48419FERR048161
SMRU485NTERR048162
SMRU48614ERR048163
SMRU487NTERR048164
SMRU48811AERR048165
SMRU4896AERR048166
SMRU4905ERR048167
SMRU4914ERR048168
SMRU49223FERR048169
SMRU49314ERR048170
SMRU49419FERR048171
SMRU49519AERR048172
SMRU49623FERR048173
SMRU4976BERR048174
SMRU4983ERR048175
SMRU49918AERR048176
SMRU50032AERR048177
SMRU50114ERR048178
SMRU50220ERR048179
SMRU5036AERR048180
SMRU5046BERR048181
SMRU5056BERR048182
SMRU50613ERR048183
SMRU50734ERR048184
SMRU50823FERR048185
SMRU50935CERR048186
SMRU510NTERR048187
SMRU51123FERR048188
SMRU5121ERR048189
SMRU51332FERR048190
SMRU514NTERR048191
SMRU51520ERR048192
SMRU51623FERR048193
SMRU51719FERR048194
SMRU51814ERR048195
SMRU51910BERR048196
SMRU520NTERR048197
SMRU5219VERR048198
SMRU52248ERR048199
SMRU52323FERR048200
SMRU52419BERR048201
SMRU52535CERR048202
SMRU52623AERR048203
SMRU5277FERR048204
SMRU52828FERR048205
SMRU52919FERR273480
SMRU53019FERR273481
SMRU53134ERR273482
SMRU532NTERR273483
SMRU53315BERR273484
SMRU53420ERR273485
SMRU53533CERR273486
SMRU53623FERR273487
SMRU53719FERR273488
SMRU5386BERR273489
SMRU539NTERR273490
SMRU54019FERR273491
SMRU54135CERR273492
SMRU54223FERR273493
SMRU5433ERR273494
SMRU5447FERR273495
SMRU54538ERR273496
SMRU54623FERR273497
SMRU5476BERR273498
SMRU54810BERR273499
SMRU54915BERR273500
SMRU550NTERR273501
SMRU55134ERR273502
SMRU55219FERR273503
SMRU55311AERR052626
SMRU55411AERR052627
SMRU555NTERR052628
SMRU556NTERR052629
SMRU55710AERR052630
SMRU55821ERR052631
SMRU559NTERR052632
SMRU56035FERR052633
SMRU56119BERR052634
SMRU56210BERR052635
SMRU56316FERR052636
SMRU56423FERR052637
SMRU5654ERR052638
SMRU56623FERR052639
SMRU56714ERR052640
SMRU56823FERR052641
SMRU569NTERR052642
SMRU5706BERR052643
SMRU571NTERR052644
SMRU5726AERR052645
SMRU5733ERR052646
SMRU57423FERR052647
SMRU575NTERR052648
SMRU57619FERR052649

Streptococcus pneumoniae evolution and population structure during longitudinal sampling in a defined human population

Sample

Strain

Run Accession

SMRU577NTERR052650
SMRU578NTERR051412
SMRU57914ERR051413
SMRU58018CERR051414
SMRU58118CERR051415
SMRU58219FERR051416
SMRU5836AERR051417
SMRU58437ERR051418
SMRU585NTERR051419
SMRU586NTERR051420
SMRU587NTERR051421
SMRU588NTERR051422
SMRU58928FERR051423
SMRU59023AERR051424
SMRU59123FERR051425
SMRU5926BERR051426
SMRU59323FERR051427
SMRU594NTERR051428
SMRU595NTERR051429
SMRU59633BERR051430
SMRU597NTERR051431
SMRU5988ERR051432
SMRU59933BERR051433
SMRU600NTERR051434
SMRU60119FERR051435
SMRU602NTERR051436
SMRU60323FERR051437
SMRU60423FERR051438
SMRU60545ERR051439
SMRU606NTERR051440
SMRU6076BERR051441
SMRU608NTERR051442
SMRU609NTERR051443
SMRU61034ERR051444
SMRU61123FERR051445
SMRU612NTERR051446
SMRU6136BERR051447
SMRU61413ERR051448
SMRU6159VERR051449
SMRU6169VERR051450
SMRU61715CERR051451
SMRU61823FERR051452
SMRU61923AERR051453
SMRU62023FERR051454
SMRU6216BERR051455
SMRU62214ERR051456
SMRU62323FERR051457
SMRU624NTERR051458
SMRU62523FERR057735
SMRU62523FERR273504
SMRU626NTERR057736
SMRU626NTERR273505
SMRU62719BERR057737
SMRU62719BERR273506
SMRU62819FERR057738
SMRU62819FERR273507
SMRU629NTERR057739
SMRU629NTERR273508
SMRU63024FERR057740
SMRU63024FERR273509
SMRU63123FERR057741
SMRU63123FERR273510
SMRU63219BERR057742
SMRU63219BERR273511
SMRU63319BERR057743
SMRU63319BERR273512
SMRU6346BERR057744
SMRU6346BERR273513
SMRU63523FERR057745
SMRU63523FERR273514
SMRU63623FERR057746
SMRU63623FERR273515
SMRU63711AERR057747
SMRU63711AERR273516
SMRU63814ERR057748
SMRU63814ERR273517
SMRU639NTERR057749
SMRU639NTERR273518
SMRU64034ERR057750
SMRU64034ERR273519
SMRU64134ERR057751
SMRU64134ERR273520
SMRU64219FERR057752
SMRU64219FERR273521
SMRU64323FERR057753
SMRU64323FERR273522
SMRU64410BERR057754
SMRU64410BERR273523
SMRU64523FERR057755
SMRU64523FERR273524
SMRU64619FERR057756
SMRU64619FERR273525
SMRU64723FERR057757
SMRU64723FERR273526
SMRU64819FERR057758
SMRU64819FERR273527
SMRU64915CERR051459
SMRU6503ERR051460
SMRU6516AERR051461
SMRU652NTERR051462
SMRU65318CERR051463
SMRU65418CERR051464
SMRU6556CERR051465
SMRU65635CERR051466
SMRU6576BERR051467
SMRU6584ERR051468
SMRU6594ERR051469
SMRU66023FERR051470
SMRU661NTERR051471
SMRU66224FERR051472
SMRU66323FERR051473
SMRU66415BERR051474
SMRU66519FERR051475
SMRU66619FERR051476
SMRU66723FERR051477
SMRU66818CERR051478
SMRU66918AERR051479
SMRU67022AERR051480
SMRU671NTERR051481
SMRU67223FERR051482
SMRU67319FERR051483
SMRU6741ERR051484
SMRU675NTERR051485
SMRU67637ERR051486
SMRU67714ERR051487
SMRU678NTERR051488
SMRU67923FERR051489
SMRU68023FERR051490
SMRU68134ERR051491
SMRU68223AERR051492
SMRU68319FERR051493
SMRU68414ERR051494
SMRU68532AERR051495
SMRU68613ERR051496
SMRU687NTERR051497
SMRU688NTERR051498
SMRU689NTERR051499
SMRU69021ERR051500
SMRU691NTERR051501
SMRU6926AERR051502
SMRU69331ERR051503
SMRU694NTERR051504
SMRU695NTERR051505
SMRU69614ERR051506
SMRU69710BERR051507
SMRU69834ERR051508
SMRU69923FERR051509
SMRU700NTERR051510
SMRU70135CERR051511
SMRU70217FERR051512
SMRU703NTERR051513
SMRU70419FERR051514
SMRU70519FERR051515
SMRU70633BERR051516
SMRU70734ERR051517
SMRU70835CERR051518
SMRU709NTERR051519
SMRU71023FERR051520
SMRU71119AERR051521
SMRU712NTERR051522
SMRU713NTERR051523
SMRU71419FERR051524
SMRU715NTERR051525
SMRU71628FERR051526
SMRU71723FERR051527
SMRU71832FERR051528
SMRU71919BERR051529
SMRU72022AERR051530
SMRU721NTERR051531
SMRU72218FERR051532
SMRU72321ERR051533
SMRU72418CERR051534
SMRU72524FERR051535
SMRU7266CERR051536
SMRU72716FERR051537
SMRU72810AERR051538
SMRU72914ERR051539
SMRU73035CERR051540
SMRU73119FERR051541
SMRU7326BERR051542
SMRU73323FERR051543
SMRU7346AERR051544
SMRU73519FERR051545
SMRU73623FERR051546
SMRU737NTERR051547
SMRU738NTERR051548
SMRU73919FERR051549
SMRU74014ERR051550
SMRU74134ERR051551
SMRU74215BERR051552
SMRU74319FERR051553
SMRU74416FERR051554
SMRU7456BERR052602
SMRU7466BERR052603
SMRU747NTERR052604
SMRU7486BERR052605
SMRU74922AERR052606
SMRU750NTERR052607
SMRU7515ERR052608
SMRU75215BERR052609
SMRU75319FERR052610
SMRU754NTERR052611
SMRU75523FERR052612
SMRU756NTERR052613
SMRU75719FERR052614
SMRU75823AERR052615
SMRU75918CERR052616
SMRU76019FERR052617
SMRU76124FERR052618
SMRU762NTERR052619
SMRU763NTERR052620
SMRU7641ERR052621
SMRU765NTERR052622
SMRU7669VERR052623
SMRU76711AERR052624
SMRU76815AERR052625
SMRU76921ERR054509
SMRU77019FERR054510
SMRU77123AERR054511
SMRU772NTERR054512
SMRU7736CERR054513
SMRU77419FERR054514
SMRU77511AERR054515
SMRU77640ERR054516
SMRU7776CERR054517
SMRU7786BERR054518
SMRU77911AERR054519
SMRU78011AERR054520
SMRU78131ERR054521
SMRU782NTERR054522
SMRU78335CERR054523
SMRU78423FERR054524
SMRU78523FERR054525
SMRU78634ERR054526
SMRU78715CERR054527
SMRU78819FERR054528
SMRU789NTERR054529
SMRU79019FERR054530
SMRU79133BERR054531
SMRU79223FERR054532
SMRU79335CERR054533
SMRU79414ERR054534
SMRU79518CERR054535
SMRU79628FERR054536
SMRU797NTERR054537
SMRU79831ERR054538
SMRU79934ERR054539
SMRU8009VERR054540
SMRU80111AERR054541
SMRU8026BERR054542
SMRU80319FERR054543
SMRU8046CERR054544
SMRU805NTERR054545
SMRU80613ERR054546
SMRU80719AERR054547
SMRU80819BERR054548
SMRU809NTERR054549
SMRU81035FERR054550
SMRU81110BERR054551
SMRU81234ERR054552
SMRU81335FERR054553
SMRU81433BERR054554
SMRU81535CERR054555
SMRU81619FERR054556
SMRU81723FERR056683
SMRU81819AERR056684
SMRU81919FERR056685
SMRU820NTERR056686
SMRU821NTERR056687
SMRU82235FERR056688
SMRU82323FERR056689
SMRU824NTERR056690
SMRU82523FERR056691
SMRU82619FERR056692
SMRU8276BERR056693
SMRU82814ERR056694
SMRU82919FERR056695
SMRU830NTERR056696
SMRU83134ERR056697
SMRU83234ERR056698
SMRU83311AERR056699
SMRU8346BERR056700
SMRU8359NERR056701
SMRU83634ERR056702
SMRU83714ERR056703
SMRU83819FERR056704
SMRU83919FERR056705
SMRU84023AERR056706
SMRU84134ERR056707
SMRU84234ERR056708
SMRU84323FERR056709
SMRU844NTERR056710
SMRU845NTERR056711
SMRU84610BERR056712
SMRU84710BERR056713
SMRU848NTERR056714
SMRU8496AERR056715
SMRU850NTERR056716
SMRU85123FERR056717
SMRU85219FERR056718
SMRU85319FERR056719
SMRU85419FERR056720
SMRU85519FERR056721
SMRU856NTERR056722
SMRU85719FERR056723
SMRU858NTERR056724
SMRU85919FERR056725
SMRU86023FERR056726
SMRU86123FERR056727
SMRU86210AERR056728
SMRU86319FERR056729
SMRU86419FERR056730
SMRU86537ERR054557
SMRU86619AERR054558
SMRU86710BERR054559
SMRU86823FERR054560
SMRU8696AERR054561
SMRU8706AERR054562
SMRU8716CERR054563
SMRU872NTERR054564
SMRU87319FERR054565
SMRU8746BERR054566
SMRU8756AERR054567
SMRU87613ERR054568
SMRU87723FERR054569
SMRU878NTERR054570
SMRU8796AERR054571
SMRU880NTERR054572
SMRU881NTERR054573
SMRU88245ERR054574
SMRU88319FERR054575
SMRU88423FERR054576
SMRU88523BERR054577
SMRU886NTERR054578
SMRU88719FERR054579
SMRU88814ERR054580
SMRU88919FERR049960
SMRU890NTERR049961
SMRU89119FERR049962
SMRU892NTERR049963
SMRU89319FERR049964
SMRU8946AERR049965
SMRU895NTERR049966
SMRU89621ERR049967
SMRU89723FERR049968
SMRU89819BERR049969
SMRU899NTERR049970
SMRU90034ERR049971
SMRU90123FERR049972
SMRU902NTERR049973
SMRU903NTERR049974
SMRU904NTERR049975
SMRU90535FERR049976
SMRU906NTERR049977
SMRU9076BERR049978
SMRU908NTERR049979
SMRU90919FERR049980
SMRU91019FERR049981
SMRU91119FERR049982
SMRU91219FERR049983
SMRU913NTERR049984
SMRU914NTERR049985
SMRU91518CERR049986
SMRU916NTERR049987
SMRU91713ERR049988
SMRU918NTERR049989
SMRU91919FERR049990
SMRU92019AERR049991
SMRU921NTERR049992
SMRU9226AERR049993
SMRU92319FERR049994
SMRU924NTERR049995
SMRU92519FERR049996
SMRU92615BERR049997
SMRU92719FERR049998
SMRU92810FERR049999
SMRU92919FERR050000
SMRU93019FERR050001
SMRU93123FERR050002
SMRU93216FERR050003
SMRU9336AERR050004
SMRU93419FERR050005
SMRU93523FERR050006
SMRU93619FERR050007
SMRU93710FERR050008
SMRU9386AERR050009
SMRU93923FERR050010
SMRU94035FERR050011
SMRU94123FERR050012
SMRU942NTERR050013
SMRU943NTERR050014
SMRU94419FERR050015
SMRU9456BERR050016
SMRU946NTERR050017
SMRU947NTERR050018
SMRU9486BERR050019
SMRU94919FERR050020
SMRU9506CERR050021
SMRU9516AERR050022
SMRU952NTERR050023
SMRU95319FERR050024
SMRU95419FERR050025
SMRU9558ERR050026
SMRU95623FERR050027
SMRU957NTERR050028
SMRU95823FERR050029
SMRU95919BERR050030
SMRU96023FERR050031
SMRU96119FERR050032
SMRU962NTERR050033
SMRU96323FERR050034
SMRU964NTERR050035
SMRU9656CERR050036
SMRU966NTERR050037
SMRU96723FERR050038
SMRU968NTERR050039
SMRU96919FERR050040
SMRU970NTERR050041
SMRU97115AERR050042
SMRU972NTERR050043
SMRU97329ERR050044
SMRU974NTERR050045
SMRU975NTERR050046
SMRU9769VERR050047
SMRU97719FERR050048
SMRU97819FERR050049
SMRU97923FERR050050
SMRU98033CERR050051
SMRU9816BERR050052
SMRU98219FERR050053
SMRU98318FERR050054
SMRU98419FERR050055
SMRU98519FERR051555
SMRU98619FERR051556
SMRU98715AERR051557
SMRU98823FERR051558
SMRU98917FERR051559
SMRU9906BERR051560
SMRU9916AERR051561
SMRU99219FERR051562
SMRU99323FERR051563
SMRU994NTERR051564
SMRU995NTERR051565
SMRU996NTERR051566
SMRU997NTERR051567
SMRU9986BERR051568
SMRU99919FERR051569
SMRU100025FERR051570
SMRU100123AERR051571
SMRU10027FERR051572
SMRU10037FERR051573
SMRU100417FERR051574
SMRU1005NTERR051575
SMRU10066BERR051576
SMRU100719FERR051577
SMRU100820ERR051578
SMRU100920ERR056731
SMRU100920ERR273528
SMRU101023FERR056732
SMRU101023FERR273529
SMRU101135FERR056733
SMRU101135FERR273530
SMRU101235CERR056734
SMRU101235CERR273531
SMRU101335CERR056735
SMRU101335CERR273532
SMRU101418CERR056736
SMRU101418CERR273533
SMRU101519FERR056737
SMRU101519FERR273534
SMRU10163ERR056738
SMRU10163ERR273535
SMRU10179VERR056739
SMRU10179VERR273536
SMRU101819FERR056740
SMRU101819FERR273537
SMRU1019NTERR056741
SMRU1019NTERR273538
SMRU1020NTERR056742
SMRU1020NTERR273539
SMRU102123FERR056743
SMRU102123FERR273540
SMRU102219FERR056744
SMRU102219FERR273541
SMRU102313ERR056745
SMRU102313ERR273542
SMRU102423FERR056746
SMRU102423FERR273543
SMRU102519AERR056747
SMRU102519AERR273544
SMRU102623AERR056748
SMRU102623AERR273545
SMRU1027NTERR056749
SMRU1027NTERR273546
SMRU102834ERR056750
SMRU102834ERR273547
SMRU102923FERR056751
SMRU102923FERR273548
SMRU103015AERR056752
SMRU103015AERR273549
SMRU103135FERR056753
SMRU103135FERR273550
SMRU10329VERR056754
SMRU10329VERR273551
SMRU103319FERR051579
SMRU103421ERR051580
SMRU103519FERR051581
SMRU10366CERR051582
SMRU103723FERR051583
SMRU103819FERR051584
SMRU103919FERR051585
SMRU104022AERR051586
SMRU1041NTERR051587
SMRU104223BERR051588
SMRU104323FERR051589
SMRU104423FERR051590
SMRU104535FERR051591
SMRU104619FERR051592
SMRU104725FERR051593
SMRU104834ERR051594
SMRU104922AERR051595
SMRU10506CERR051596
SMRU105119FERR051597
SMRU105222AERR051598
SMRU105310FERR051599
SMRU10546BERR051600
SMRU105522FERR051601
SMRU105619FERR051602
SMRU10577FERR051603
SMRU10586BERR051604
SMRU10593ERR051605
SMRU106019FERR051606
SMRU106119FERR051607
SMRU10626CERR051608
SMRU10636AERR051609
SMRU106419FERR051610
SMRU106519FERR051611
SMRU106633CERR051612
SMRU106723FERR051613
SMRU106811AERR051614
SMRU10699NERR051615
SMRU107011AERR051616
SMRU1071NTERR051617
SMRU107223FERR051618
SMRU107332AERR051619
SMRU107419FERR051620
SMRU107523FERR051621
SMRU107623FERR051622
SMRU1077NTERR051623
SMRU107819FERR051624
SMRU1079NTERR051625
SMRU108019FERR051626
SMRU10816BERR051627
SMRU108216FERR051628
SMRU108319FERR051629
SMRU108419FERR051630
SMRU108515BERR051631
SMRU10866CERR051632
SMRU108723FERR051633
SMRU108815BERR051634
SMRU108919FERR051635
SMRU109035CERR051636
SMRU109116FERR051637
SMRU109213ERR051638
SMRU109319BERR051639
SMRU10946BERR051640
SMRU109519FERR051641
SMRU109640ERR051642
SMRU10977BERR051643
SMRU109823FERR051644
SMRU10997FERR051645
SMRU110046ERR051646
SMRU110119FERR051647
SMRU110233BERR051648
SMRU11036AERR051649
SMRU1104NTERR051650
SMRU11056BERR051651
SMRU110614ERR051652
SMRU110723FERR051653
SMRU110822FERR051654
SMRU110915CERR051655
SMRU111031ERR051656
SMRU1111NTERR051657
SMRU111215BERR051658
SMRU111315AERR051659
SMRU1114NTERR051660
SMRU111518CERR051661
SMRU111619AERR051662
SMRU111723FERR051663
SMRU111811AERR051664
SMRU1119NTERR051665
SMRU11206BERR051666
SMRU11216BERR051667
SMRU11226BERR051668
SMRU112319FERR051669
SMRU112411AERR051670
SMRU112523FERR051671
SMRU112632FERR051672
SMRU112715CERR051673
SMRU112819BERR051674
SMRU112923AERR054581
SMRU1130NTERR054582
SMRU11313ERR054583
SMRU113219FERR054584
SMRU113323FERR054585
SMRU11346BERR054586
SMRU1135NTERR054587
SMRU113619FERR054588
SMRU113715BERR054589
SMRU11386BERR054590
SMRU113923FERR054591
SMRU114033CERR054592
SMRU114122FERR054593
SMRU114219FERR054594
SMRU114315BERR054595
SMRU114423FERR054596
SMRU11456BERR054597
SMRU1146NTERR054598
SMRU114723FERR054599
SMRU114821ERR054600
SMRU114923FERR054601
SMRU115019FERR054602
SMRU115119FERR054603
SMRU115233BERR054604

Streptococcus pneumoniae evolution and population structure during longitudinal sampling in a defined human population

Sample

Strain

Run Accession

SMRU115319FERR054605
SMRU1154NTERR054606
SMRU115541FERR054607
SMRU11566BERR054608
SMRU115721ERR054609
SMRU115835FERR054610
SMRU11596CERR054611
SMRU11609NERR054612
SMRU11616BERR054613
SMRU11627BERR054614
SMRU116323AERR054615
SMRU116410FERR054616
SMRU116518CERR054617
SMRU1166NTERR054618
SMRU116710BERR054619
SMRU1168NTERR054620
SMRU11696BERR054621
SMRU117015AERR054622
SMRU11716AERR054623
SMRU11726AERR054624
SMRU117333BERR054625
SMRU11749VERR054626
SMRU117510AERR054627
SMRU117633BERR054628
SMRU1177NTERR054629
SMRU117823FERR054630
SMRU117914ERR054631
SMRU118010BERR054632
SMRU118123FERR054633
SMRU11821ERR054634
SMRU118317FERR054635
SMRU1184NTERR054636
SMRU1185NTERR054637
SMRU118619AERR054638
SMRU118723AERR054639
SMRU118834ERR054640
SMRU119019FERR054641
SMRU119133BERR054642
SMRU119223FERR054643
SMRU119322AERR054644
SMRU119429ERR054645
SMRU119535CERR054646
SMRU119619FERR054647
SMRU11976AERR054648
SMRU119819FERR054649
SMRU119913ERR054650
SMRU120035FERR054651
SMRU120114ERR054294
SMRU12023ERR054295
SMRU12036BERR054296
SMRU12043ERR054297
SMRU120535CERR054298
SMRU12068ERR054299
SMRU120715CERR054300
SMRU120823AERR054301
SMRU120935FERR054302
SMRU121032FERR054303
SMRU121122FERR054304
SMRU121215BERR054305
SMRU121311AERR054306
SMRU12149VERR054307
SMRU121523FERR054308
SMRU121619FERR054309
SMRU121734ERR054310
SMRU12186BERR054311
SMRU121923FERR054312
SMRU12206BERR054313
SMRU122115CERR054314
SMRU122235CERR054315
SMRU122321ERR054316
SMRU12246AERR054317
SMRU122519FERR054318
SMRU122623FERR054319
SMRU12276CERR054320
SMRU1228NTERR054321
SMRU122918CERR054322
SMRU123019FERR054323
SMRU12316BERR054324
SMRU123210AERR054325
SMRU12336AERR054326
SMRU123414ERR054327
SMRU1235NTERR054328
SMRU123622AERR054329
SMRU12376BERR054330
SMRU123841FERR054331
SMRU123922AERR054332
SMRU124016FERR054333
SMRU124115AERR054334
SMRU124219FERR054335
SMRU124323FERR054336
SMRU12446AERR054337
SMRU12456BERR054338
SMRU124610BERR054339
SMRU12476BERR054340
SMRU124828FERR054341
SMRU124923FERR054342
SMRU125023FERR054343
SMRU12516BERR054344
SMRU1252NTERR054345
SMRU125310AERR054346
SMRU125416FERR054347
SMRU125516FERR054348
SMRU125623FERR054349
SMRU1257NTERR054350
SMRU125819FERR054351
SMRU12596BERR054352
SMRU12606AERR054353
SMRU126133BERR054354
SMRU126219FERR054355
SMRU126333BERR054356
SMRU126419FERR054357
SMRU12654ERR054358
SMRU12666BERR054359
SMRU126723FERR054360
SMRU126823BERR054361
SMRU1269NTERR054362
SMRU1270NTERR054363
SMRU127133BERR054364
SMRU127219FERR054365
SMRU127319FERR054366
SMRU127414ERR054367
SMRU12756CERR054368
SMRU12766BERR054369
SMRU127719AERR054370
SMRU127819FERR054371
SMRU1279NTERR054372
SMRU128015CERR054373
SMRU128119FERR054374
SMRU128219FERR054375
SMRU128323FERR054376
SMRU128419FERR054377
SMRU128519FERR054378
SMRU128623FERR054379
SMRU1287NTERR054380
SMRU128823FERR054381
SMRU128923BERR054382
SMRU129023FERR054383
SMRU129113ERR054384
SMRU129231ERR054385
SMRU12936AERR054386
SMRU129419FERR054387
SMRU12957FERR054388
SMRU129619FERR054389
SMRU129714ERR054390
SMRU129814ERR054391
SMRU129921ERR054392
SMRU130022AERR054393
SMRU130119BERR054394
SMRU130216FERR054395
SMRU130334ERR054396
SMRU130419FERR054397
SMRU130519FERR054398
SMRU13066BERR054399
SMRU130746ERR054400
SMRU130818CERR054401
SMRU130915BERR054402
SMRU131019FERR054403
SMRU131117FERR054404
SMRU131223FERR054405
SMRU131323FERR054406
SMRU131418CERR054407
SMRU131523FERR054408
SMRU131623BERR054409
SMRU131714ERR054410
SMRU131819FERR054411
SMRU13196AERR054412
SMRU132015AERR054413
SMRU132138ERR060029
SMRU1322NTERR060030
SMRU132315BERR060031
SMRU132433BERR060032
SMRU132523FERR060033
SMRU132623FERR060034
SMRU132714ERR060035
SMRU132810AERR060036
SMRU132923FERR060037
SMRU133018CERR060038
SMRU133146ERR060039
SMRU1332NTERR060040
SMRU133313ERR060041
SMRU13346BERR060042
SMRU1335NTERR060043
SMRU13366BERR060044
SMRU133710FERR060045
SMRU133814ERR060046
SMRU133935BERR060047
SMRU1340NTERR060048
SMRU13416BERR060049
SMRU134216FERR060050
SMRU1343NTERR060051
SMRU134414ERR060052
SMRU134523FERR054222
SMRU134610AERR054223
SMRU134734ERR054224
SMRU134823FERR054225
SMRU134946ERR054226
SMRU135034ERR054227
SMRU135113ERR054228
SMRU13526BERR054229
SMRU135335FERR054230
SMRU135423FERR054231
SMRU1355NTERR054232
SMRU135633BERR054233
SMRU135719FERR054234
SMRU135833BERR054235
SMRU13596BERR054236
SMRU13605ERR054237
SMRU136117FERR054238
SMRU136223FERR054239
SMRU13639VERR054240
SMRU136419FERR054241
SMRU136513ERR054242
SMRU136616FERR054243
SMRU1367NTERR054244
SMRU136834ERR054245
SMRU136919FERR054246
SMRU13706AERR054247
SMRU137138ERR054248
SMRU137219FERR054249
SMRU137335CERR054250
SMRU137419FERR054251
SMRU137522AERR054252
SMRU137623FERR054253
SMRU1377NTERR054254
SMRU1378NTERR054255
SMRU137923FERR054256
SMRU138010BERR054257
SMRU1381NTERR054258
SMRU138215AERR054259
SMRU138346ERR054260
SMRU13843ERR054261
SMRU138523FERR054262
SMRU138614ERR054263
SMRU138734ERR054264
SMRU138819FERR054265
SMRU138923FERR054266
SMRU1390NTERR054267
SMRU13916BERR054268
SMRU139219AERR054269
SMRU139335FERR054270
SMRU139414ERR054271
SMRU139534ERR054272
SMRU139623FERR054273
SMRU1397NTERR054274
SMRU139810AERR054275
SMRU139914ERR054276
SMRU140015BERR054277
SMRU140119FERR054278
SMRU14023ERR054279
SMRU140319FERR054280
SMRU140433BERR054281
SMRU14053ERR054282
SMRU14066BERR054283
SMRU140733BERR054284
SMRU140819FERR054285
SMRU140917FERR054286
SMRU14106AERR054287
SMRU141123FERR054288
SMRU141223FERR054289
SMRU141323FERR054290
SMRU141423FERR054291
SMRU141513ERR054292
SMRU14169NERR054293
SMRU141714ERR056755
SMRU141819FERR056756
SMRU141913ERR056757
SMRU142023FERR056758
SMRU14217BERR056759
SMRU14229NERR056760
SMRU142319FERR056761
SMRU142415BERR056762
SMRU142534ERR056763
SMRU142614ERR056764
SMRU142735CERR056765
SMRU142814ERR056766
SMRU142923FERR056767
SMRU143034ERR056768
SMRU14316BERR056769
SMRU14323ERR056770
SMRU143323FERR056771
SMRU14343ERR056772
SMRU143515BERR056773
SMRU143614ERR056774
SMRU143735CERR056775
SMRU143840ERR056776
SMRU143919FERR056777
SMRU144021ERR056778
SMRU144111AERR056779
SMRU144215BERR056780
SMRU144338ERR056781
SMRU14446AERR056782
SMRU144514ERR056783
SMRU14466BERR056784
SMRU14476AERR056785
SMRU1448NTERR056786
SMRU144914ERR056787
SMRU145019FERR056788
SMRU1451NTERR056789
SMRU1452NTERR056790
SMRU145319FERR056791
SMRU145415BERR056792
SMRU14553ERR056793
SMRU145628FERR056794
SMRU14579NERR056795
SMRU145823FERR056796
SMRU145914ERR056797
SMRU1460NTERR056798
SMRU146122AERR056799
SMRU146229ERR056800
SMRU146323FERR056801
SMRU146446ERR056802
SMRU1465NTERR054414
SMRU146623FERR054415
SMRU146719AERR054416
SMRU146823FERR054417
SMRU1469NTERR054418
SMRU147021ERR054419
SMRU147115AERR054420
SMRU147219FERR054421
SMRU14736BERR054422
SMRU147414ERR054423
SMRU147515BERR054424
SMRU147646ERR054425
SMRU14779NERR054426
SMRU147815CERR054427
SMRU147923FERR054428
SMRU148010BERR054429
SMRU148119FERR054430
SMRU148223FERR054431
SMRU148321ERR054432
SMRU148423FERR054433
SMRU14853ERR054434
SMRU148614ERR054435
SMRU148729ERR054436
SMRU1488NTERR054437
SMRU14896BERR054438
SMRU149012FERR054439
SMRU149134ERR054440
SMRU149219FERR054441
SMRU149323FERR054442
SMRU1494NTERR054443
SMRU149615BERR054444
SMRU149719FERR054445
SMRU149829ERR054446
SMRU149915CERR054447
SMRU15006AERR054448
SMRU150123FERR054449
SMRU150240ERR054450
SMRU150323FERR054451
SMRU150416FERR054452
SMRU150534ERR054453
SMRU150619FERR054454
SMRU15079NERR054455
SMRU1508NTERR054456
SMRU150923FERR054457
SMRU151035FERR054458
SMRU1511NTERR054459
SMRU151215CERR054460
SMRU151319FERR054461
SMRU151415AERR054462
SMRU151519FERR054463
SMRU151614ERR054464
SMRU151719FERR054465
SMRU151819FERR054466
SMRU1519NTERR054467
SMRU15206BERR054468
SMRU152110BERR054469
SMRU1522NTERR054470
SMRU152313ERR054471
SMRU152414ERR054472
SMRU15257BERR054473
SMRU152635CERR054474
SMRU152722AERR054475
SMRU152819FERR054476
SMRU152910AERR054477
SMRU153014ERR054478
SMRU153123FERR054479
SMRU153222FERR054480
SMRU15336AERR054481
SMRU153415AERR054482
SMRU153515BERR054483
SMRU153619FERR054484
SMRU1537NTERR054485
SMRU153815CERR054486
SMRU153915CERR054487
SMRU1540NTERR054488
SMRU154111AERR054489
SMRU154215AERR054490
SMRU154319FERR054491
SMRU154434ERR054492
SMRU15456CERR054493
SMRU15466BERR054494
SMRU154723FERR054495
SMRU1548NTERR054496
SMRU154921ERR054497
SMRU155023FERR054498
SMRU155135FERR054499
SMRU15526BERR054500
SMRU155323FERR054501
SMRU155435CERR054502
SMRU1555NTERR054503
SMRU155633BERR054504
SMRU155733BERR054505
SMRU155819AERR054506
SMRU155934ERR054507
SMRU156019AERR054508
SMRU156119FERR057759
SMRU1562NTERR057760
SMRU156334ERR057761
SMRU156434ERR057762
SMRU156515CERR057763
SMRU15666AERR057764
SMRU15674ERR057765
SMRU156823FERR057766
SMRU156923FERR057767
SMRU15706AERR057768
SMRU157119FERR057769
SMRU157219FERR057770
SMRU157323FERR057771
SMRU1574NTERR057772
SMRU157523FERR057773
SMRU15766BERR057774
SMRU157729ERR057775
SMRU157814ERR057776
SMRU157919FERR057777
SMRU158018CERR057778
SMRU158114ERR057779
SMRU158215BERR057780
SMRU158329ERR057781
SMRU158423FERR057782
SMRU158523FERR057783
SMRU1586NTERR057784
SMRU158719FERR057785
SMRU15886AERR057786
SMRU158923FERR057787
SMRU159019FERR057788
SMRU159119FERR057789
SMRU15926AERR057790
SMRU159323FERR057791
SMRU159419FERR057792
SMRU159510BERR057793
SMRU159634ERR057794
SMRU159718CERR057795
SMRU159819FERR057796
SMRU1599NTERR057797
SMRU160019FERR057798
SMRU160119AERR057799
SMRU1602NTERR057800
SMRU160323FERR057801
SMRU160437ERR057802
SMRU1605NTERR057803
SMRU160615CERR057804
SMRU160717FERR057805
SMRU160819FERR057806
SMRU160919FERR057807
SMRU16106AERR057808
SMRU1611NTERR057809
SMRU161215CERR057810
SMRU1613NTERR057811
SMRU161414ERR057812
SMRU16156BERR057813
SMRU1616NTERR057814
SMRU161710AERR057815
SMRU16186AERR057816
SMRU161910BERR057817
SMRU162014ERR057818
SMRU162134ERR057819
SMRU162223AERR057820
SMRU1623NTERR057821
SMRU162415BERR057822
SMRU162523FERR057823
SMRU1626NTERR057824
SMRU162719FERR057825
SMRU162834ERR057826
SMRU162919AERR057827
SMRU163019FERR057828
SMRU16316BERR057829
SMRU163334ERR059957
SMRU1634NTERR059958
SMRU163515AERR059959
SMRU163615BERR059960
SMRU163719FERR059961
SMRU163823FERR059962
SMRU163934ERR059963
SMRU164013ERR059964
SMRU164118CERR059965
SMRU164211AERR059966
SMRU164323FERR059967
SMRU164435FERR059968
SMRU164523FERR059969
SMRU164615BERR059970
SMRU164719FERR059971
SMRU164823FERR059972
SMRU1649NTERR059973
SMRU165015AERR059974
SMRU16516AERR059975
SMRU165219AERR059976
SMRU1653NTERR059977
SMRU165419FERR059978
SMRU16556AERR059979
SMRU16566AERR059980
SMRU1657NTERR056803
SMRU16586BERR056804
SMRU165915AERR056805
SMRU166019FERR056806
SMRU166119FERR056807
SMRU166214ERR056808
SMRU16637FERR056809
SMRU166419AERR056810
SMRU1665NTERR056811
SMRU166619FERR056812
SMRU16676BERR056813
SMRU1668NTERR056814
SMRU166919FERR056815
SMRU167033BERR056816
SMRU167119FERR056817
SMRU167223FERR056818
SMRU16736BERR056819
SMRU167414ERR056820
SMRU167535FERR056821
SMRU167619FERR056822
SMRU167735FERR056823
SMRU167819FERR056824
SMRU1679NTERR056825
SMRU168014ERR056826
SMRU16816AERR056827
SMRU168214ERR056828
SMRU168323FERR056829
SMRU16849NERR056830
SMRU16856BERR056831
SMRU1686NTERR056832
SMRU168719FERR056833
SMRU168835FERR056834
SMRU168919AERR056835
SMRU169015AERR056836
SMRU169119AERR056837
SMRU169223FERR056838
SMRU169315BERR056839
SMRU169423FERR056840
SMRU16956BERR056841
SMRU169619FERR056842
SMRU169731ERR056843
SMRU169810FERR056844
SMRU169919AERR056845
SMRU170023FERR056846
SMRU170115AERR056847
SMRU170232FERR056848
SMRU170315BERR056849
SMRU170435CERR056850
SMRU170523AERR056851
SMRU170633CERR056852
SMRU170723FERR056853
SMRU1708NTERR056854
SMRU170935CERR056855
SMRU171014ERR056856
SMRU171110BERR056857
SMRU171234ERR056858
SMRU1713NTERR056859
SMRU17146AERR056860
SMRU17156BERR056861
SMRU171635CERR056862
SMRU17176CERR056863
SMRU171819AERR056864
SMRU171913ERR056865
SMRU172014ERR056866
SMRU172119FERR056867
SMRU172223FERR056868
SMRU172323FERR056869
SMRU17246CERR056870
SMRU1725NTERR056871
SMRU1726NTERR056872
SMRU172714ERR056873
SMRU172834ERR056874

Streptococcus pneumoniae evolution and population structure during longitudinal sampling in a defined human population

Sample

Strain

Run Accession

SMRU172918CERR056875
SMRU17306CERR056876
SMRU173121ERR056877
SMRU173224FERR056878
SMRU1733NTERR056879
SMRU17346AERR056880
SMRU173619FERR056881
SMRU1737NTERR056882
SMRU173831ERR056883
SMRU173919FERR056884
SMRU174010BERR056885
SMRU174110BERR056886
SMRU174215BERR056887
SMRU174314ERR056888
SMRU174421ERR056889
SMRU174519AERR056890
SMRU174610BERR056891
SMRU174720ERR056892
SMRU174835CERR056893
SMRU17496CERR056894
SMRU175024FERR056895
SMRU17516BERR056896
SMRU1752NTERR056897
SMRU175333BERR059981
SMRU175419FERR059982
SMRU175519FERR059983
SMRU175629ERR059984
SMRU175719AERR059985
SMRU175845ERR059986
SMRU175915BERR059987
SMRU176014ERR059988
SMRU17616CERR059989
SMRU176223FERR059990
SMRU176314ERR059991
SMRU17646BERR059992
SMRU176519FERR059993
SMRU176635CERR059994
SMRU176719AERR059995
SMRU176819FERR059996
SMRU176913ERR059997
SMRU177038ERR059998
SMRU177117FERR059999
SMRU177219FERR060000
SMRU17733ERR060001
SMRU177419FERR060002
SMRU177523FERR060003
SMRU17766BERR060004
SMRU177719FERR063786
SMRU1778NTERR063787
SMRU177919FERR063788
SMRU17806AERR063789
SMRU17816BERR063790
SMRU178215BERR063791
SMRU178323FERR063792
SMRU178419FERR063793
SMRU17854ERR063794
SMRU178619FERR063795
SMRU17876BERR063796
SMRU178821ERR063797
SMRU178915CERR063798
SMRU179014ERR063799
SMRU179123FERR063800
SMRU179219FERR063801
SMRU179319FERR063802
SMRU179433BERR063803
SMRU17957FERR063804
SMRU1796NTERR063805
SMRU179723FERR063806
SMRU179815BERR063807
SMRU179928FERR063808
SMRU1800NTERR063809
SMRU180119FERR060005
SMRU180219FERR060006
SMRU180320ERR060007
SMRU180423FERR060008
SMRU1805NTERR060009
SMRU18066BERR060010
SMRU180719FERR060011
SMRU180823FERR060012
SMRU180919FERR060013
SMRU181019FERR060014
SMRU18116BERR060015
SMRU181233BERR060016
SMRU1813NTERR060017
SMRU18143ERR060018
SMRU181514ERR060019
SMRU181619FERR060020
SMRU18174ERR060021
SMRU181834ERR060022
SMRU1819NTERR060023
SMRU1820NTERR060024
SMRU1821NTERR060025
SMRU182215BERR060026
SMRU182333CERR060027
SMRU182419FERR060028
SMRU182515CERR089616
SMRU182614ERR089617
SMRU182715CERR089618
SMRU1828NTERR089619
SMRU182923FERR089620
SMRU183023FERR089621
SMRU1831NTERR089622
SMRU183223FERR089623
SMRU183314ERR089624
SMRU183414ERR089625
SMRU183523FERR089626
SMRU183623FERR089627
SMRU183719FERR089628
SMRU183819AERR089629
SMRU183919FERR089630
SMRU184028FERR089631
SMRU1841NTERR089632
SMRU18426CERR089633
SMRU184320ERR089634
SMRU184423FERR089635
SMRU184513ERR089636
SMRU184619FERR089637
SMRU1847NTERR089638
SMRU1848NTERR089639
SMRU184919FERR057830
SMRU185015BERR057831
SMRU18516BERR057832
SMRU1852NTERR057833
SMRU185319FERR057834
SMRU1854NTERR057835
SMRU1855NTERR057836
SMRU1856NTERR057837
SMRU18576BERR057838
SMRU185819AERR057839
SMRU185913ERR057840
SMRU186013ERR057841
SMRU186123FERR057842
SMRU18626CERR057843
SMRU186319FERR057844
SMRU186423FERR057845
SMRU186519FERR057846
SMRU186619FERR057847
SMRU186715BERR057848
SMRU186823FERR057849
SMRU186935CERR057850
SMRU187018AERR057851
SMRU187113ERR057852
SMRU187219AERR057853
SMRU187319FERR057854
SMRU187419FERR057855
SMRU187519AERR057856
SMRU187623FERR057857
SMRU187723FERR057858
SMRU187835CERR057859
SMRU187934ERR057860
SMRU18806BERR057861
SMRU188114ERR057862
SMRU188219FERR057863
SMRU18836BERR057864
SMRU18846BERR057865
SMRU188519BERR057866
SMRU188615AERR057867
SMRU188721ERR057868
SMRU18886AERR057869
SMRU188934ERR057870
SMRU189019FERR057871
SMRU189119FERR057872
SMRU1892NTERR057873
SMRU189334ERR057874
SMRU189410BERR057875
SMRU189519FERR057876
SMRU189611AERR057877
SMRU18976CERR057878
SMRU18986AERR057879
SMRU189919FERR057880
SMRU190010BERR057881
SMRU1901NTERR057882
SMRU190223FERR057883
SMRU190314ERR057884
SMRU190411AERR057885
SMRU190511AERR057886
SMRU190623FERR057887
SMRU190719FERR057888
SMRU190819FERR057889
SMRU190919AERR057890
SMRU191019FERR057891
SMRU19116CERR057892
SMRU191219FERR057893
SMRU1913NTERR057894
SMRU191419FERR057895
SMRU191514ERR057896
SMRU191613ERR057897
SMRU19176BERR057898
SMRU191819FERR057899
SMRU1919NTERR057900
SMRU19206AERR057901
SMRU19216AERR057902
SMRU192219FERR057903
SMRU192313ERR057904
SMRU19246BERR057905
SMRU1925NTERR057906
SMRU192623FERR057907
SMRU192714ERR057908
SMRU19286AERR057909
SMRU19296AERR057910
SMRU1930NTERR057911
SMRU193115AERR057912
SMRU193219FERR057913
SMRU193323FERR057914
SMRU193423FERR057915
SMRU19356BERR057916
SMRU1936NTERR057917
SMRU1937NTERR057918
SMRU193834ERR057919
SMRU19396BERR057920
SMRU1940NTERR057921
SMRU194114ERR057922
SMRU194219AERR057923
SMRU194310FERR057924
SMRU194423FERR057925
SMRU194515CERR057926
SMRU19466AERR057927
SMRU194715AERR057928
SMRU194819FERR057929
SMRU194923FERR057930
SMRU195019FERR057931
SMRU1951NTERR057932
SMRU195223FERR057933
SMRU1953NTERR057934
SMRU195419FERR057935
SMRU195533BERR057936
SMRU19566BERR057937
SMRU195715CERR057938
SMRU195814ERR057939
SMRU195923FERR057940
SMRU196032FERR057941
SMRU19616CERR057942
SMRU196211AERR057943
SMRU196335FERR057944
SMRU19646AERR057945
SMRU196519FERR057946
SMRU196614ERR057947
SMRU19679LERR057948
SMRU196819FERR057949
SMRU1969NTERR057950
SMRU197015AERR057951
SMRU197119FERR057952
SMRU197233BERR057953
SMRU19736BERR057954
SMRU19746BERR057955
SMRU19756AERR057956
SMRU197614ERR057957
SMRU197723FERR057958
SMRU1978NTERR057959
SMRU19796CERR057960
SMRU198019FERR057961
SMRU198128FERR057962
SMRU198223FERR057963
SMRU19836CERR057964
SMRU19846BERR057965
SMRU198513ERR057966
SMRU198634ERR057967
SMRU198740ERR057968
SMRU198815BERR057969
SMRU198922AERR057970
SMRU19906CERR057971
SMRU199115AERR057972
SMRU199219FERR057973
SMRU19936BERR057974
SMRU199423FERR057975
SMRU199528FERR057976
SMRU199631ERR057977
SMRU1997NTERR057978
SMRU199815CERR057979
SMRU199915BERR057980
SMRU200019FERR057981
SMRU200119AERR057982
SMRU200219FERR057983
SMRU20036BERR057984
SMRU200419FERR057985
SMRU200514ERR057986
SMRU2006NTERR057987
SMRU200719AERR057988
SMRU2008NTERR057989
SMRU200923FERR057990
SMRU201034ERR057991
SMRU201119FERR057992
SMRU201219FERR057993
SMRU201323FERR057994
SMRU2014NTERR057995
SMRU201535FERR057996
SMRU2016NTERR057997
SMRU201719FERR063810
SMRU20186CERR063811
SMRU201934ERR063812
SMRU20206AERR063813
SMRU20216CERR063814
SMRU202210BERR063815
SMRU2023NTERR063816
SMRU202434ERR063817
SMRU202523FERR063818
SMRU20266BERR063819
SMRU20276BERR063820
SMRU20286AERR063821
SMRU2029NTERR063822
SMRU20306BERR063823
SMRU20316BERR063824
SMRU2032NTERR063825
SMRU20336CERR063826
SMRU203410BERR063827
SMRU20356BERR063828
SMRU2036NTERR063829
SMRU203723FERR063830
SMRU20383ERR063831
SMRU203936ERR063832
SMRU2040NTERR063833
SMRU204114ERR063834
SMRU204215BERR063835
SMRU20436BERR063836
SMRU204423FERR063837
SMRU20456BERR063838
SMRU204610FERR063839
SMRU204719FERR063840
SMRU204819FERR063841
SMRU20496BERR063842
SMRU205014ERR063843
SMRU205110AERR063844
SMRU205219FERR063845
SMRU20536AERR063846
SMRU205410AERR063847
SMRU205519FERR063848
SMRU20566BERR063849
SMRU205719FERR063850
SMRU2058NTERR063851
SMRU2059NTERR063852
SMRU206015CERR063853
SMRU2061NTERR063854
SMRU206210FERR063855
SMRU206319AERR063856
SMRU206419FERR063857
SMRU20659VERR063858
SMRU206635FERR063859
SMRU206723FERR063860
SMRU206814ERR063861
SMRU206914ERR063862
SMRU207015AERR063863
SMRU207123FERR063864
SMRU20726AERR063865
SMRU2073NTERR063866
SMRU20746BERR063867
SMRU207523FERR063868
SMRU207623FERR063869
SMRU207716FERR063870
SMRU207819FERR063871
SMRU207923FERR063872
SMRU208014ERR063873
SMRU208115BERR063874
SMRU208223FERR063875
SMRU20836BERR063876
SMRU20846CERR063877
SMRU208519FERR063878
SMRU208615AERR063879
SMRU208715AERR063880
SMRU20886BERR063881
SMRU208916FERR063882
SMRU20906CERR063883
SMRU209119FERR063884
SMRU209219FERR063885
SMRU2093NTERR063886
SMRU209433BERR063887
SMRU2095NTERR063888
SMRU2096NTERR063889
SMRU20976BERR063890
SMRU2098NTERR063891
SMRU209919BERR063892
SMRU210019AERR063893
SMRU210115BERR063894
SMRU210219FERR063895
SMRU210319FERR063896
SMRU21046BERR063897
SMRU210519FERR063898
SMRU21066BERR063899
SMRU210719FERR063900
SMRU210819FERR063901
SMRU210919FERR063902
SMRU211023FERR063903
SMRU211135CERR063904
SMRU2112NTERR063905
SMRU2113NTERR063906
SMRU2114NTERR063907
SMRU21154ERR063908
SMRU211619FERR063909
SMRU211715AERR063910
SMRU211819FERR063911
SMRU211915AERR063912
SMRU212019FERR063913
SMRU212119FERR063914
SMRU212210AERR063915
SMRU212319FERR063916
SMRU2124NTERR063917
SMRU212520ERR063918
SMRU212623FERR063919
SMRU21276BERR063920
SMRU212815AERR063921
SMRU212915CERR063922
SMRU213014ERR063923
SMRU213118CERR063924
SMRU213215CERR063925
SMRU213319FERR063926
SMRU213423FERR063927
SMRU213519FERR063928
SMRU213614ERR063929
SMRU213718CERR063930
SMRU213834ERR063931
SMRU21396AERR063932
SMRU214018CERR063933
SMRU2141NTERR063934
SMRU214219FERR063935
SMRU214323FERR063936
SMRU214423FERR063937
SMRU2145NTERR063938
SMRU214634ERR063939
SMRU21476CERR063940
SMRU214823FERR063941
SMRU214923FERR063942
SMRU215015CERR063943
SMRU215111AERR063944
SMRU215219FERR063945
SMRU2153NTERR063946
SMRU215419FERR063947
SMRU21559VERR063948
SMRU215619FERR063949
SMRU215740ERR063950
SMRU21586AERR063951
SMRU215923FERR063952
SMRU216015AERR063953
SMRU216119FERR063954
SMRU2162NTERR063955
SMRU2163NTERR063956
SMRU216423FERR063957
SMRU216523FERR063958
SMRU216619BERR063959
SMRU216719FERR063960
SMRU21686BERR063961
SMRU216932AERR063962
SMRU217014ERR063963
SMRU2171NTERR063964
SMRU21727BERR063965
SMRU217319FERR063966
SMRU21746AERR063967
SMRU217529ERR063968
SMRU217610FERR063969
SMRU217713ERR063970
SMRU21786BERR063971
SMRU217919FERR063972
SMRU218023FERR063973
SMRU218115CERR063974
SMRU218237ERR063975
SMRU218319FERR063976
SMRU21846AERR063977
SMRU218516FERR063978
SMRU21866AERR063979
SMRU21876BERR063980
SMRU218810AERR063981
SMRU218923FERR063982
SMRU219019AERR063983
SMRU2191NTERR063984
SMRU2192NTERR063985
SMRU2193NTERR063986
SMRU219419AERR063987
SMRU219534ERR063988
SMRU219619FERR063989
SMRU219719FERR063990
SMRU219819AERR063991
SMRU2199NTERR063992
SMRU22006BERR063993
SMRU220132FERR063994
SMRU220223AERR063995
SMRU22036CERR063996
SMRU220415CERR063997
SMRU220513ERR063998
SMRU220617FERR063999
SMRU220734ERR064000
SMRU2208NTERR064001
SMRU220923FERR066200
SMRU221023FERR066201
SMRU221120ERR066202
SMRU221233DERR066203
SMRU221335FERR066204
SMRU221419FERR066205
SMRU22156BERR066206
SMRU22166CERR066207
SMRU221714ERR066208
SMRU221819FERR066209
SMRU2219NTERR066210
SMRU222031ERR066211
SMRU2221NTERR066212
SMRU222219FERR066213
SMRU222335CERR066214
SMRU222419FERR066215
SMRU22256AERR066216
SMRU222611AERR066217
SMRU2227NTERR066218
SMRU222834ERR066219
SMRU222919FERR066220
SMRU2230NTERR066221
SMRU223119BERR066222
SMRU223218CERR066223
SMRU22334ERR084251
SMRU2234NTERR084252
SMRU22356AERR084253
SMRU223623FERR084254
SMRU223723FERR084255
SMRU223823FERR084256
SMRU2239NTERR084257
SMRU224023FERR084258
SMRU22416AERR084259
SMRU2242NTERR084260
SMRU22436AERR084261
SMRU224419AERR084262
SMRU224523AERR084263
SMRU224611AERR084264
SMRU224719FERR084265
SMRU2248NTERR084266
SMRU224910AERR084267
SMRU225019FERR084268
SMRU225123AERR084269
SMRU22526BERR084270
SMRU22536AERR084271
SMRU225419AERR084272
SMRU225514ERR084273
SMRU225623FERR084274
SMRU225723FERR066224
SMRU225815AERR066225
SMRU22599NERR066226
SMRU226013ERR066227
SMRU22616AERR066228
SMRU226240ERR066229
SMRU22636AERR066230
SMRU226419BERR066231
SMRU226518CERR066232
SMRU226615CERR066233
SMRU226731ERR066234
SMRU226822FERR066235
SMRU22696AERR066236
SMRU22706AERR066237
SMRU227119FERR066238
SMRU2272NTERR066239
SMRU227319FERR066240
SMRU2274NTERR066241
SMRU227513ERR066242
SMRU227634ERR066243
SMRU227719FERR066244
SMRU2278NTERR066245
SMRU2279NTERR066246
SMRU22806BERR066247
SMRU22816AERR066248
SMRU228237ERR066249
SMRU2283NTERR066250
SMRU228423FERR066251
SMRU228519FERR066252
SMRU228616FERR066253
SMRU22876AERR066254
SMRU228848ERR066255
SMRU228914ERR066256
SMRU229019FERR066257
SMRU229119FERR066258
SMRU2292NTERR066259
SMRU22936AERR066260
SMRU22946BERR066261
SMRU229515BERR066262
SMRU229632FERR066263
SMRU229719AERR066264
SMRU229835CERR066265
SMRU229917FERR066266
SMRU230015BERR066267
SMRU230115BERR066268
SMRU23024ERR066269
SMRU2303NTERR066270
SMRU230423AERR066271

Streptococcus pneumoniae evolution and population structure during longitudinal sampling in a defined human population

Sample

Strain

Run Accession

SMRU230519FERR066272
SMRU230619AERR066273
SMRU23076CERR066274
SMRU2308NTERR066275
SMRU230923FERR066276
SMRU23106CERR066277
SMRU231111AERR066278
SMRU231215BERR066279
SMRU231323AERR066280
SMRU23146CERR066281
SMRU231523FERR066282
SMRU2316NTERR066283
SMRU231719FERR066284
SMRU231819FERR066285
SMRU231919FERR066286
SMRU2320NTERR066287
SMRU232119FERR066288
SMRU2322NTERR066289
SMRU232335CERR066290
SMRU2324NTERR066291
SMRU232534ERR066292
SMRU2326NTERR066293
SMRU232723FERR066294
SMRU232834ERR066295
SMRU232934ERR066296
SMRU233023FERR066297
SMRU23316BERR066298
SMRU23326BERR066299
SMRU233311AERR066300
SMRU233437ERR066301
SMRU233511AERR066302
SMRU2336NTERR066303
SMRU2337NTERR066304
SMRU233819FERR066305
SMRU233919AERR066306
SMRU2340NTERR066307
SMRU23416AERR066308
SMRU234223FERR066309
SMRU23437BERR066310
SMRU234434ERR066311
SMRU23456BERR066312
SMRU23466BERR066313
SMRU23476AERR066314
SMRU234813ERR066315
SMRU23496CERR066316
SMRU235023FERR066317
SMRU235123FERR066318
SMRU235210BERR066319
SMRU23536BERR066320
SMRU235419FERR066321
SMRU235533DERR066322
SMRU23566BERR066323
SMRU235718CERR066324
SMRU235838ERR066325
SMRU235920ERR066326
SMRU23606BERR066327
SMRU23616AERR066328
SMRU236219AERR066329
SMRU236314ERR066330
SMRU236423FERR066331
SMRU236516FERR066332
SMRU236611AERR066333
SMRU23676AERR066334
SMRU236822FERR066335
SMRU236940ERR066336
SMRU237019FERR066337
SMRU2371NTERR066338
SMRU237219FERR066339
SMRU237313ERR066340
SMRU23746CERR066341
SMRU237519FERR066342
SMRU237613ERR066343
SMRU237718CERR066344
SMRU237823FERR066345
SMRU23796CERR066346
SMRU23806AERR066347
SMRU238119FERR066348
SMRU238219AERR066349
SMRU23839NERR066350
SMRU238419FERR066351
SMRU238514ERR066352
SMRU238623FERR066353
SMRU238723BERR066354
SMRU23885ERR066355
SMRU23896CERR066356
SMRU239023FERR066357
SMRU239138ERR066358
SMRU239235CERR066359
SMRU2393NTERR066360
SMRU239414ERR066361
SMRU2395NTERR066362
SMRU2396NTERR066363
SMRU239715CERR066364
SMRU23986AERR066365
SMRU23996AERR066366
SMRU240015BERR066367
SMRU2401NTERR064139
SMRU240219FERR064140
SMRU240315BERR064141
SMRU240419AERR064142
SMRU24056BERR064143
SMRU240611AERR064144
SMRU24076CERR064145
SMRU240810BERR064146
SMRU24096AERR064147
SMRU241021ERR064148
SMRU241123AERR064149
SMRU241219AERR064150
SMRU241319AERR064151
SMRU24146AERR064152
SMRU24156AERR064153
SMRU24166AERR064154
SMRU241719FERR064155
SMRU24189VERR064156
SMRU241910BERR064157
SMRU242011AERR064158
SMRU24213ERR064159
SMRU242219FERR064160
SMRU242313ERR064161
SMRU2424NTERR064162
SMRU242515AERR064163
SMRU24266BERR064164
SMRU2427NTERR064165
SMRU242819FERR064166
SMRU2429NTERR064167
SMRU24306BERR064168
SMRU243123FERR064169
SMRU243215CERR064170
SMRU24336BERR064171
SMRU243423FERR064172
SMRU243516FERR064173
SMRU2436NTERR064174
SMRU243719FERR064175
SMRU24386BERR064176
SMRU243919FERR064177
SMRU244019FERR064178
SMRU24416BERR064179
SMRU244219FERR064180
SMRU24436AERR064181
SMRU244419AERR064182
SMRU244534ERR064183
SMRU24466AERR064184
SMRU2447NTERR064185
SMRU244823FERR064186
SMRU244923AERR064187
SMRU24506AERR064188
SMRU245115AERR064189
SMRU245214ERR064190
SMRU245323FERR064191
SMRU245434ERR064192
SMRU245535CERR064193
SMRU245635CERR064194
SMRU245715BERR064195
SMRU245810BERR064196
SMRU245919FERR064197
SMRU246023FERR064198
SMRU246113ERR064199
SMRU246223FERR064200
SMRU246318FERR064201
SMRU2464NTERR064202
SMRU246519AERR064203
SMRU246619FERR064204
SMRU246721ERR064205
SMRU246819FERR064206
SMRU246923FERR064207
SMRU247023FERR064208
SMRU247119AERR064209
SMRU247218CERR064210
SMRU247314ERR064211
SMRU24746BERR064212
SMRU24756BERR064213
SMRU247615CERR064214