The Sanger Institute has completed the sequencing of and recently published the 2.25 Mb genome of S. equi strain 4047 in collaboration with Prof. Mike Kehoe, of the School of Cell and Molecular Biosciences, University of Newcastle, Duncan Maskell of the Centre for Veterinary Science, Dept. of Clinical Veterinary medicine, The University of Cambridge, and Dr. Neil Chanter of the Centre for Preventative Medicine, Animal Health Trust.
Published Genome Data
The fully annotated genome is available from the EMBL/GenBank databases with accession number FM204883.
Shotgun and assembly data from this project are available from our FTP site.
Studies
Streptococcus equi genome diversity
Sample | Strain | Run Accession |
|---|---|---|
| SZ0001 | JKS 115 | ERR125327 |
| SZ0002 | 7159 | ERR125328 |
| SZ0003 | D2a | ERR125329 |
| SZ0004 | 2329 | ERR125330 |
| SZ0005 | 3604 | ERR125331 |
| SZ0006 | 1770 | ERR125332 |
| SZ0007 | 6619 | ERR125333 |
| SZ0008 | 605849 | ERR125334 |
| SZ0009 | B26 Tansey | ERR125335 |
| SZ0010 | H100673_1 | ERR125336 |
| SZ0011 | 1185 | ERR125337 |
| SZ0012 | B27 0624.1 | ERR125338 |
| SZ0013 | 8300 | ERR125339 |
| SZ0014 | B26 0863 | ERR125340 |
| SZ0015 | 2410 | ERR125341 |
| SZ0016 | 4866 | ERR125342 |
| SZ0017 | 4897 | ERR125343 |
| SZ0018 | 1ID00103 | ERR125344 |
| SZ0019 | H05084 0501 | ERR125345 |
| SZ0020 | 1384 | ERR125346 |
| SZ0021 | D33 | ERR125347 |
| SZ0022 | H04264 0457 | ERR125348 |
| SZ0023 | E1133/10-1 | ERR125349 |
| SZ0024 | C7 | ERR125350 |
Evolution and transmission of Streptococcus zooepidemicus ST-209 during the 2010 outbreak of respiratory disease in Icelandic horses
Discovery of sequence diversity in Streptococcus equi
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Genomic evidence for the evolution of Streptococcus equi: host restriction, increased virulence, and genetic exchange with human pathogens.
PLoS pathogens 2009;5;3;e1000346
PUBMED: 19325880; PMC: 2654543; DOI: 10.1371/journal.ppat.1000346

