Shigella sonnei

Data Downloads

This project is ongoing and data for this organism will be made available in due course.

[Genome Research Limited]

Published Genome Data

The fully sequenced genome of Shigella sonnei 53G is available from EMBL/GenBank. The chromosome has accession number HE616528, plasmid A has HE616529, plasmid B: HE616530, plasmid C: HE616531 and plasmid E has HE616532.

Studies

Shigella sonnei & flexneri from around the world

Sample

Strain

Run Accession

SH0001sh02-7265ERR042775
SH0002sh02-8933ERR042776
SH0003sh02-9633ERR042777
SH0004sh03-0995ERR042778
SH0005sh03-1223ERR042779
SH0006sh03-3567ERR042780
SH0007sh03-7022ERR042781
SH0008sh07-0426ERR042782
SH0009sh07-1018ERR042783
SH0010sh07-1608ERR042784
SH0011sh07-1910ERR042785
SH0012sh07-2004ERR042786
SH0013sh07-2224ERR042787
SH0014sh96-1420ERR042788
SH0015sh96-2938ERR042789
SH0016sh96-5282ERR042790
SH0017sh96-6494ERR042791
SH0018F3189ERR042792
SH0019F3342ERR042793
SH0020sh03-1382ERR042794
SH0021F3183ERR042795
sh0200H1 1258 0301ERR103471
sh0201H1 1262 0252ERR103472
sh0202H1 1244 0349ERR103473
sh0203H1 1270 0288ERR103474
sh0204H1 1292 0489ERR103475
sh0205H1 1308 0349ERR103476
sh0206H1 1310 0099ERR103477
sh0207H1 1308 0358ERR103478

Temporal & geographical Shigella genus diversity in Southern Vietnam 1994-2011

Sample

Strain

Run Accession

1001410014ERR049134
1002110021ERR049135
1003110031ERR049136
1003510035ERR049137
1006010060ERR049138
1006310063ERR049139
1007110071ERR049140
1007310073ERR049141
1008310083ERR049142
1009310093ERR049143
1010210102ERR049144
1011110111ERR049145
1011510115ERR049146
1013410134ERR049147
1013510135ERR049148
1015210152ERR049149
1015910159ERR049150
1018810188ERR049151
1026310263ERR049153
1032010320ERR049154
1036510365ERR049155
2000620006ERR047311
2002120021ERR047312
2002320023ERR047313
2003720037ERR047314
2007020070ERR047315
2009420094ERR047316
2022820228ERR047317
2026120261ERR047318
2026320263ERR047319
2034320343ERR047320
3000330003ERR047321
3000830008ERR047322
3001030010ERR047323
3003730037ERR047324
3005430054ERR047325
3005930059ERR047326
3007130071ERR047327
3007330073ERR047328
3010030100ERR047330
3011230112ERR047331
3012430124ERR047332
3016230162ERR047334
3016430164ERR047335
3016930169ERR047336
3017230172ERR047337
3017430174ERR047338
3023330233ERR047339
3029330293ERR047340
3036630366ERR047341
3037130371ERR047342
3038730387ERR047343
3045030450ERR047344
3045130451ERR047345
EG1014EG1014ERR047411
EG1015EG1015ERR047412
EG1016EG1016ERR047413
EG1017EG1017ERR047414
EG1018EG1018ERR047415
EG1019EG1019ERR047416
EG1020EG1020ERR047417
EG1021EG1021ERR047418
EG1022EG1022ERR047419
EG1023EG1023ERR047420
EG1024EG1024ERR047421
EG1025EG1025ERR047422
EG1026EG1026ERR047423
EG1027EG1027ERR047424
EG1028EG1028ERR047425
EG1029EG1029ERR047426
HUE01HUE01ERR047427
HUE02HUE02ERR047428
HUE05HUE05ERR047431
HUE16HUE16ERR047441
HUE17HUE17ERR047442
HUE19HUE19ERR047444
HUE20HUE20ERR047445
HUE21HUE21ERR047446
HUE22HUE22ERR047447
HUE23HUE23ERR047448
HUE24HUE24ERR047449
HUE25HUE25ERR047450
HUE26HUE26ERR047451
HUE27HUE27ERR047452
HUE29HUE29ERR047453
HUE30HUE30ERR047454
HUE31HUE31ERR047455
HUE32HUE32ERR047456
HUE33HUE33ERR047457
HUE34HUE34ERR047458
HUE36HUE36ERR047460
HUE40HUE40ERR047461
HUE42HUE42ERR047462
HUE43HUE43ERR047463
HUE46HUE46ERR047464
HUE47HUE47ERR047465
HUE48HUE48ERR047466
HUE50HUE50ERR047223
HUE53HUE53ERR047224
HUE55HUE55ERR047226
HUE57HUE57ERR047228
HUE58HUE58ERR047229
HUE60HUE60ERR047230
HUE62HUE62ERR047232
HUE64HUE64ERR047234
HUE67HUE67ERR047237
HUE68HUE68ERR047238
KH02KH02ERR047240
KH04KH04ERR047241
KH05KH05ERR047242
KH06KH06ERR047243
KH07KH07ERR047244
KH09KH09ERR047245
KH10KH10ERR047246
KH11KH11ERR047247
KH12KH12ERR047248
KH13KH13ERR047249
KH14KH14ERR047250
KH15KH15ERR047251
KH16KH16ERR047252
KH17KH17ERR047253
KH18KH18ERR047254
KH19KH19ERR047255
KH20KH20ERR047256
KH21KH21ERR047257
KH23KH23ERR047258
KH24KH24ERR047259
KH25KH25ERR047260
KH26KH26ERR047261
KH27KH27ERR047262
KH28KH28ERR047263
KH29KH29ERR047264
KH30KH30ERR047265
KH32KH32ERR047266
KH33KH33ERR047267
KH34KH34ERR047268
KH35KH35ERR047269
KH37KH37ERR047270
KH38KH38ERR047271
KH40KH40ERR047273
KH41KH41ERR047274
KH42KH42ERR047275
KH43KH43ERR047276
KH45KH45ERR047277
KH53KH53ERR047283
KH54KH54ERR047284
KH55KH55ERR047285
KH57KH57ERR047286
MS0043MS0043ERR047304
MS0094MS0094ERR048239

Global diversity of Shigella species

Sample

Strain

Run Accession

sh0318331557ERR126968
sh0319317372ERR126969
sh0320333660ERR126970
sh0321323423ERR126971
sh0322399883ERR126972
sh0323364955ERR126973
sh0324337651ERR126974
sh0325344097ERR126975
sh0326392387ERR126976
sh0327336608ERR126977
sh0328336217/28ERR126978
sh0329343700ERR126979
sh0346416849ERR126996
sh0347416945ERR126997
sh0348456191ERR126998
sh0349456625ERR126999
sh0350468199ERR127000
sh0351473648ERR127001
sh0352423266ERR127002
sh0353424238ERR127003
sh0354472271ERR127004
sh0355429578ERR127005
sh0356452996ERR127006
sh0373540765ERR127023
sh0374574438ERR127024
sh0375537702ERR127025
sh0376547136ERR127026
sh0377576649ERR127027
sh0378536705ERR127028
sh0379556827ERR127029
sh0380545720ERR127030
sh0381583225ERR127031
sh0413H1 1262 0256ERR127049
sh0414H1 1254 0448ERR127050
sh0415H1 1262 0255ERR127051
sh0416H1 1254 0447ERR127052
sh0417H1 1254 0446ERR127053
sh0418H1 1222 0292ERR127054
sh0419H1 1270 0289ERR127055
sh0420H1 1270 0290ERR127056
sh0421H1 1270 0291ERR127057
sh0422H1 1292 0487ERR127058
sh0423H1 1308 0359ERR127059
sh0424H1 1302 0319ERR127060
sh0425H1 1302 0318ERR127061
sh0426H1 1324 0269ERR127062
sh055413020315ERR137860
sh055313000380ERR137859
sh055212760375ERR137858
sh055112640201ERR137857
sh055012540444ERR137856
sh054912520523ERR137855
sh054812440350ERR137854
sh054712400300ERR137853
sh054612380508ERR137852
sh054512280489ERR137851
sh054412260396ERR137850
sh054312260393ERR137849
sh054212180189ERR137848
sh054112160578ERR137847
sh054012080223ERR137846
sh053912040275ERR137845
sh053811960559ERR137844
sh053711940293ERR137843
sh053611940290ERR137842
sh053511940289ERR137841
sh053411880291ERR137840
sh053311880290ERR137839
sh053211840195ERR137838
sh053111580198ERR137837
sh053011560296ERR137836
sh052911520185ERR134584
sh052811500115ERR134583
sh052711460092ERR134582
sh052611360225ERR134581
sh052511320215ERR134580
sh052411240716ERR134579
sh052311160207ERR134578
sh052210860081ERR134577
sh052110820109ERR134576
sh052010760223ERR134575
sh051910740171ERR134574
sh051810700174ERR134573
sh051710700172ERR134572
sh051610700171ERR134571
sh051510660297ERR134570
sh051410460250ERR134569
sh051310420344ERR134568
sh051210380306ERR134567
sh051110380305ERR134566
sh051010320322ERR134565
sh050910240516ERR134564
sh050810240510ERR137835
sh050710200140ERR137834
sh050610180349ERR137833
sh050510180348ERR137832
sh050410160327ERR137831
sh050310140277ERR137830
sh05025260716ERR134563
sh05015260715ERR134562
sh05005180385ERR134561
sh059414960444ERR137900
sh059314960439ERR137899
sh059214920665ERR137898
sh059114860268ERR137897
sh059014740504ERR137896
sh058914720099ERR137895
sh058814680652ERR137894
sh058714680285ERR137893
sh058614580244ERR137892
sh058514580243ERR137891
sh058414540516ERR137890
sh058314480432ERR137889
sh058214320392ERR137888
sh058114280468ERR137887
sh058014240339ERR137886
sh057914140278ERR137885
sh057814120313ERR137884
sh057714120309ERR137883
sh057614100341ERR137882
sh057514100339ERR137881
sh057414060413ERR137880
sh057314040421ERR137879
sh057213960479ERR137878
sh057113940345ERR137877
sh057013940341ERR137876
sh056913920471ERR137875
sh056813880312ERR137874
sh056713820434ERR137873
sh056613780309ERR137872
sh056513760472ERR137871
sh056413640364ERR137870
sh056313640363ERR137869
sh056213600367ERR137868
sh056113400357ERR137867
sh056013380338ERR137866
sh055913280267ERR137865
sh055813260438ERR137864
sh055713240260ERR137863
sh055613180225ERR137862
sh055513080360ERR137861
sh1413SS508/07ERR200484
sh1412SS406/08ERR200483
sh1411SS1342/08ERR200482
sh1410SS427/10ERR200481
sh1409SS887/08ERR200480
sh1408SS1361/08ERR200479
sh1407SS96/10ERR200478
sh1406SS395/11ERR200477
sh1405SS351/06ERR200476
sh1404SS834/09ERR200475
sh1403SS313/06ERR200474
sh1402SS756/07ERR200473
sh1401SS370/11ERR200472
sh1400SS1531/05ERR200471
sh1399SS1009/09ERR200470
sh1398SS759/11ERR200469
sh1397SS175/06ERR200468
sh13961.273-11ERR200467
sh13951.128-11ERR200466
sh1394179-11ERR200465
sh1386179-11ERR200457
sh1385160-11ERR200456
sh1186K-9725ERR200449
sh1183K-9423ERR200446
sh1181K-9726ERR200444
sh1160K-9423ERR200423
sh1158K-9500ERR200421
sh1156K-9721ERR200419
sh1154K-9725ERR200417
sh1416SS182/06ERR200487
sh1415SS1560/05ERR200486
sh1414SS586/08ERR200485
sh1387180-11ERR200458
sh1480COR-008-34ERR200551
sh1479COR-007-33ERR200550
sh1478COR-007-32ERR200549
sh1477COR-007-31ERR200548
sh1476COR-007-30ERR200547
sh1475COR-007-29ERR200546
sh1474COR-007-28ERR200545
sh1473COR-006-27ERR200544
sh1472COR-006-26ERR200543
sh1471COR-006-25ERR200542
sh1470COR-006-24ERR200541
sh1469COR-006-23ERR200540
sh1468COR-005-22ERR200539
sh1467COR-005-21ERR200538
sh1466COR-005-20ERR200537
sh1465COR-004-19ERR200536
sh1464COR-004-18ERR200535
sh1463COR-004-17ERR200534
sh1462COR-004-16ERR200533
sh1461COR-004-15ERR200532
sh1460COR-004-14ERR200531
sh1459COR-004-13ERR200530
sh1458COR-004-12ERR200529
sh1457COR-003-11ERR200528
sh1456COR-003-10ERR200527
sh1455COR-003-09ERR200526
sh1454COR-003-08ERR200525
sh1453COR-003-07ERR200524
sh1452COR-002-06ERR200523
sh1451COR-002-05ERR200522
sh1450COR-002-04ERR200521
sh1449COR-002-03ERR200520
sh1448COR-002-02ERR200519
sh1447COR-002-01ERR200518
sh1446SS542/10ERR200517
sh1445SS1020/04ERR200516
sh1444SS148/08ERR200515
sh1443SS1429/07ERR200514
sh1442SS533/06ERR200513
sh1441SS2080/05ERR200512
sh1440SS1011/09ERR200511
sh1439SS621/09ERR200510
sh1438SS459/02ERR200509
sh1437SS257/09ERR200508
sh1436SS24/07ERR200507
sh1435SS1011/04ERR200506
sh1434SS423/11ERR200505
sh1433SS460/10ERR200504
sh1432SS44/05ERR200503
sh1431SS1545/05ERR200502
sh1430SS839/05ERR200501
sh1429SS1054/08ERR200500
sh1428SS1012/04ERR200499
sh1427SS578/02ERR200498
sh1426SS502/07ERR200497
sh1425SS1191/10ERR200496
sh1424SS1115/09ERR200495
sh1423SS1043/04ERR200494
sh1422SS1456/10ERR200493
sh1421SS803/08ERR200492
sh1420SS791/09ERR200491
sh1419SS1525/05ERR200490
sh1418SS1192/11ERR200489
sh1417SS463/09ERR200488
sh1393152-11ERR200464
sh1392149-11ERR200463
sh1391146-11ERR200462
sh13901.141-11ERR200461
sh13891.140-11ERR200460
sh1388181-11ERR200459
sh13842.671-10ERR212364
sh13832.448-10ERR212363
sh13821.369-10ERR212362
sh13811.364-10ERR212361
sh13801.363-10ERR212360
sh13791.299-10ERR212359
sh1378143-10ERR212358
sh13771.456-09ERR212357
sh13761.148-09ERR212356
sh13751.959-08ERR212355
sh13741.603-07ERR212354
sh13732.655-06ERR212353
sh13722.653-06ERR212352
sh13711.640-06ERR212351
sh13701.520-06ERR212350
sh13692.407-06ERR212349
sh13682.693-05ERR212348
sh13672.692-05ERR212347
sh13662.577-05ERR212346
sh13652.1228-99ERR212345
sh1364234-00ERR212344
sh13631.1217-99ERR212343
sh13621.116-00ERR212342
sh13612.921-99ERR212341
sh13602.805-99ERR212340
sh13592.804-99ERR212339
sh13582.801-99ERR212338
sh13571-771-99ERR212337
sh13561-770-99ERR212336
sh1355289-00ERR212335
sh1354287-00ERR212334
sh1353284-00ERR212333
sh1352263-00ERR212332
sh1351239-00ERR212331
sh1350231-00ERR212330
sh1349230-00ERR212329
sh13481.131-00ERR212328
sh13471.399-00ERR212327
sh1208K-11130ERR217008
sh1206K-11127ERR217006
sh1205K-7208ERR217005
sh1204K_11128ERR217004
sh1203K-11129ERR217003
sh1202K-7210ERR217002
sh1198K-7209ERR216998
2090STDY5461818UnknownERR316305
2090STDY5461817UnknownERR316304
2090STDY5461816UnknownERR316303
2090STDY5461815UnknownERR316302
2090STDY5461814UnknownERR316301
2090STDY5461813UnknownERR316300
2090STDY5461812UnknownERR316299
2090STDY5461811UnknownERR316298
2090STDY5461810UnknownERR316297
2090STDY5461801UnknownERR316296
2090STDY5461800UnknownERR316295
2090STDY5461799UnknownERR316294
2090STDY5461798UnknownERR316293
2090STDY5461797UnknownERR316292
2090STDY5461796UnknownERR316291
2090STDY5461795UnknownERR316290
2090STDY5461794UnknownERR316289
2090STDY5461793UnknownERR316288
2090STDY5461792UnknownERR316287
2090STDY5461791UnknownERR316286
2090STDY5461790UnknownERR316285
2090STDY5461789UnknownERR316284
2090STDY5461788UnknownERR316283
2090STDY5461787UnknownERR316282
2090STDY5461786UnknownERR316281
2090STDY5461785UnknownERR316280
2090STDY5461784UnknownERR316279
2090STDY5461783UnknownERR316278
2090STDY5461782UnknownERR316277
2090STDY5461781UnknownERR316276
2090STDY5461780UnknownERR316275
2090STDY5461779UnknownERR316274
2090STDY5461778UnknownERR316273
2090STDY5461777UnknownERR316272
2090STDY5461776UnknownERR316271
2090STDY5461775UnknownERR316270
2090STDY5461774UnknownERR316269
2090STDY5461773UnknownERR316268
2090STDY5461772UnknownERR316267
2090STDY5461771UnknownERR316266
2090STDY5461770UnknownERR316265
2090STDY5461769UnknownERR316264
2090STDY5461768UnknownERR316263
2090STDY5461767UnknownERR316262
2090STDY5461766UnknownERR316261
2090STDY5461765UnknownERR316260
2090STDY5461764UnknownERR316259
2090STDY5461763UnknownERR316258
2090STDY5461762UnknownERR316257
2090STDY5461761UnknownERR316256
2090STDY5461760UnknownERR316255
2090STDY5461759UnknownERR316254
2090STDY5461758UnknownERR316253
2090STDY5461757UnknownERR316252
2090STDY5461756UnknownERR316251
2090STDY5461755UnknownERR316250
2090STDY5461754UnknownERR316249
2090STDY5461753UnknownERR316248
2090STDY5461752UnknownERR316247
2090STDY5461751UnknownERR316246
2090STDY5461750UnknownERR316245
2090STDY5461749UnknownERR316244
2090STDY5461748UnknownERR316243
2090STDY5461747UnknownERR316242
2090STDY5461746UnknownERR316241
2090STDY5461745UnknownERR316240
2090STDY5461744UnknownERR316239
2090STDY5461743UnknownERR316238
2090STDY5461742UnknownERR316237
2090STDY5461741UnknownERR316236
2090STDY5461740UnknownERR316235
2090STDY5461739UnknownERR316234
2090STDY5461738UnknownERR316233
2090STDY5461737UnknownERR316232
2090STDY5461736UnknownERR316231
2090STDY5461735UnknownERR316230
2090STDY5461734UnknownERR316229
2090STDY5461732UnknownERR316228
2090STDY5461731UnknownERR316227
2090STDY5461730UnknownERR316226
2090STDY5461729UnknownERR316225
2090STDY5461728UnknownERR316224
2090STDY5461727UnknownERR316223
2090STDY5461726UnknownERR316222
2090STDY5461725UnknownERR316221
2090STDY5461724UnknownERR316220
2090STDY5461723UnknownERR316219
2090STDY5461722UnknownERR316218
2090STDY5461721UnknownERR316217
2090STDY5488144UnknownERR316401
2090STDY5488143UnknownERR316400
2090STDY5488142UnknownERR316399
2090STDY5488141UnknownERR316398
2090STDY5488140UnknownERR316397
2090STDY5488139UnknownERR316396
2090STDY5488138UnknownERR316395
2090STDY5488137UnknownERR316394
2090STDY5488136UnknownERR316393
2090STDY5488135UnknownERR316392
2090STDY5488134UnknownERR316391
2090STDY5488133UnknownERR316390
2090STDY5488132UnknownERR316389
2090STDY5488131UnknownERR316388
2090STDY5488130UnknownERR316387
2090STDY5488129UnknownERR316386
2090STDY5488128UnknownERR316385
2090STDY5488127UnknownERR316384
2090STDY5488126UnknownERR316383
2090STDY5488125UnknownERR316382
2090STDY5488124UnknownERR316381
2090STDY5488123UnknownERR316380
2090STDY5488122UnknownERR316379
2090STDY5488121UnknownERR316378
2090STDY5488120UnknownERR316377
2090STDY5488119UnknownERR316376
2090STDY5488118UnknownERR316375
2090STDY5488117UnknownERR316374
2090STDY5488116UnknownERR316373
2090STDY5488115UnknownERR316372
2090STDY5488114UnknownERR316371
2090STDY5461883UnknownERR316370
2090STDY5461882UnknownERR316369
2090STDY5461881UnknownERR316368
2090STDY5461880UnknownERR316367
2090STDY5461879UnknownERR316366
2090STDY5461878UnknownERR316365
2090STDY5461877UnknownERR316364
2090STDY5461876UnknownERR316363
2090STDY5461875UnknownERR316362
2090STDY5461874UnknownERR316361
2090STDY5461873UnknownERR316360
2090STDY5461872UnknownERR316359
2090STDY5461871UnknownERR316358
2090STDY5461870UnknownERR316357
2090STDY5461869UnknownERR316356
2090STDY5461868UnknownERR316355
2090STDY5461867UnknownERR316354
2090STDY5461866UnknownERR316353
2090STDY5461865UnknownERR316352
2090STDY5461864UnknownERR316351
2090STDY5461863UnknownERR316350
2090STDY5461862UnknownERR316349
2090STDY5461861UnknownERR316348
2090STDY5461860UnknownERR316347
2090STDY5461859UnknownERR316346
2090STDY5461858UnknownERR316345
2090STDY5461857UnknownERR316344
2090STDY5461856UnknownERR316343
2090STDY5461855UnknownERR316342
2090STDY5461854UnknownERR316341
2090STDY5461853UnknownERR316340
2090STDY5461852UnknownERR316339
2090STDY5461851UnknownERR316338
2090STDY5461850UnknownERR316337
2090STDY5461849UnknownERR316336
2090STDY5461848UnknownERR316335
2090STDY5461847UnknownERR316334
2090STDY5461846UnknownERR316333
2090STDY5461845UnknownERR316332
2090STDY5461844UnknownERR316331
2090STDY5461843UnknownERR316330
2090STDY5461842UnknownERR316329
2090STDY5461841UnknownERR316328
2090STDY5461840UnknownERR316327
2090STDY5461839UnknownERR316326
2090STDY5461838UnknownERR316325
2090STDY5461837UnknownERR316324
2090STDY5461836UnknownERR316323
2090STDY5461835UnknownERR316322
2090STDY5461834UnknownERR316321
2090STDY5461833UnknownERR316320
2090STDY5461832UnknownERR316319
2090STDY5461831UnknownERR316318
2090STDY5461830UnknownERR316317
2090STDY5461829UnknownERR316316
2090STDY5461828UnknownERR316315
2090STDY5461827UnknownERR316314
2090STDY5461826UnknownERR316313
2090STDY5461825UnknownERR316312
2090STDY5461824UnknownERR316311
2090STDY5461823UnknownERR316310
2090STDY5461822UnknownERR316309
2090STDY5461821UnknownERR316308
2090STDY5461820UnknownERR316307
2090STDY5461819UnknownERR316306

Shigella sonnei transmission study

Sample

Strain

Run Accession

SHI013599441ERR190845
SHI013499383ERR190844
SHI013399382ERR190843
SHI013299366ERR190842
SHI013199362ERR190841
SHI013099040ERR190840
SHI012999020ERR190839
SHI012898909ERR190838
SHI012798904ERR190837
SHI012698284ERR190836
SHI012598274ERR190835
SHI012497382ERR190834
SHI012397044ERR190833
SHI012297043ERR190832
SHI012196924ERR190831
SHI012096851ERR190830
SHI011996801ERR190829
SHI011896754ERR190828
SHI011796548ERR190827
SHI011696428ERR190826
SHI011595780ERR190825
SHI011495776ERR190824
SHI011395641ERR190823
SHI011295529ERR190822
SHI011195522ERR190821
SHI011095234ERR190820
SHI010995233ERR190819
SHI010895015ERR190818
SHI010795014ERR190817
SHI010695013ERR190816
SHI010093522ERR190810
SHI009993028ERR190809
SHI009892360ERR190808
SHI009792353ERR190807
SHI0233RE 1240ERR190942
SHI0232RE 1230ERR190941
SHI0231RE 1255ERR190940
SHI0230RE 1212ERR190939
SHI0229RE 438ERR190938
SHI0228RE 387ERR190937
SHI0227RE 377ERR190936
SHI0226RE 372ERR190935
SHI0225RE 367ERR190934
SHI0224RE 229ERR190933
SHI0223RE 219ERR190932
SHI0222RE 207ERR190931
SHI0221RE 153ERR190930
SHI0220RA I 408ERR190929
SHI02195RA 526ERR190928
SHI02185RA 467ERR190927
SHI0217RA 626ERR190926
SHI0216RA 575ERR190925
SHI0214RA 175ERR190924
SHI0213RA 157ERR190923
SHI0212RA 155ERR190922
SHI0211RA 148ERR190921
SHI0210RA 144ERR190920
SHI0209RA 130ERR190919
SHI0208RA 122ERR190918
SHI02070036861682ERR190917
SHI02060029022762ERR190916
SHI02050036303731ERR190915
SHI02040022672674ERR190914
SHI02030036230921ERR190913
SHI02020036860548ERR190912
SHI01960026986104ERR190906
SHI01950036991242ERR190905
SHI0194 124521ERR190904
SHI0193 124511ERR190903
SHI0192 124496ERR190902
SHI0191 124553ERR190901
SHI0190 124558ERR190900
SHI0189 124528ERR190899
SHI0188 124566ERR190898
SHI0187 124561ERR190897
SHI0186 124357ERR190896
SHI0185 124342ERR190895
SHI0184 124332ERR190894
SHI0183 124327ERR190893
SHI018210ERR190892
SHI01819ERR190891
SHI01807ERR190890
SHI01795ERR190889
SHI01783ERR190888
SHI01772ERR190887
SHI01761ERR190886
SHI0175187-2ERR190885
SHI0174173-2ERR190884
SHI0173172-2ERR190883
SHI0172170-2ERR190882
SHI0171163-2ERR190881
SHI0170162-2ERR190880
SHI0169142-2ERR190879
SHI0168139-2ERR190878
SHI0167120dERR190877
SHI0166120cERR190876
SHI0165118-2ERR190875
SHI0164115cERR190874
SHI0163115aERR190873
SHI0162115-2ERR190872
SHI0161187ERR190871
SHI0160173ERR190870
SHI0159172ERR190869
SHI0158170ERR190868
SHI0157163ERR190867
SHI0156162ERR190866
SHI0155142ERR190865
SHI0154139ERR190864
SHI0153118ERR190863
SHI0152109310ERR190862
SHI0151109305ERR190861
SHI0150109295ERR190860
SHI0149109280ERR190859
SHI0148109275ERR190858
SHI0147109251ERR190857
SHI0146109201ERR190856
SHI0145109171ERR190855
SHI0144109114ERR190854
SHI0143109113ERR190853
SHI0142109112ERR190852
SHI0141102735ERR190851
SHI014099767ERR190850
SHI013999608ERR190849
SHI013899444ERR190848
SHI013799443ERR190847
SHI013699442ERR190846
SHI010594825ERR190815
SHI010494824ERR190814
SHI010394818ERR190813
SHI010294817ERR190812
SHI010194160ERR190811
SHI02893RE 1402ERR190998
SHI02883RE 1375ERR190997
SHI02873RE 1349ERR190996
SHI02863RE 1303ERR190995
SHI02853RE 1279ERR190994
SHI02843RE 1263ERR190993
SHI02833RE 1251ERR190992
SHI02823RE 403ERR190991
SHI02813RE 396ERR190990
SHI02803RE 379ERR190989
SHI02793RE 352ERR190988
SHI02783RE 240ERR190987
SHI02773RE 212ERR190986
SHI02763RE 157ERR190985
SHI02753RE 128ERR190984
SHI0274RE 1521ERR190983
SHI0273RE 1502ERR190982
SHI0272RE 1493ERR190981
SHI0271RE 1492ERR190980
SHI0270RE 1477ERR190979
SHI0269RE 1464ERR190978
SHI0268RE 1457ERR190977
SHI0267RE 1439ERR190976
SHI0266RE 1436ERR190975
SHI0265RE 1434ERR190974
SHI0264RE 1432ERR190973
SHI0263RE 1429ERR190972
SHI0262RE 1426ERR190971
SHI0261RE 1423ERR190970
SHI0260RE 1407ERR190969
SHI0259RE 1405ERR190968
SHI0258RE 1399ERR190967
SHI0257RE 1398ERR190966
SHI0256RE 1397ERR190965
SHI0255RE 1388ERR190964
SHI0254RE 1386ERR190963
SHI0253RE 1385ERR190962
SHI0252RE 1382ERR190961
SHI0251RE 1381ERR190960
SHI0250RE 1378ERR190959
SHI0249RE 1370ERR190958
SHI0248RE 1368ERR190957
SHI0247RE 1366ERR190956
SHI0246RE 1365ERR190955
SHI0245RE 1364ERR190954
SHI0244RE 1358ERR190953
SHI0243RE 1354ERR190952
SHI0242RE 1337ERR190951
SHI0241RE 1336ERR190950
SHI0240RE 1318ERR190949
SHI0239RE 1313ERR190948
SHI0238RE 1285ERR190947
SHI0237RE 1262ERR190946
SHI0236RE 1259ERR190945
SHI0235RE 1250ERR190944
SHI0234RE 1248ERR190943
SHI02010035527695ERR190911
SHI02000036314706ERR190910
SHI01990036860531ERR190909
SHI01980036314959ERR190908
SHI01970036234868ERR190907
SHI0016120 4CFERR190726
SHI0015115 CF dERR190725
SHI0014115 CF bERR190724
SHI0013115 4CFERR190723
SHI0012105 CFERR190722
SHI0011105 2CFERR190721
SHI0010GA-133ERR190720
SHI0001S132ERR190711
SHI004975887ERR190759
SHI004875693ERR190758
SHI004775691ERR190757
SHI004675686ERR190756
SHI004575684ERR190755
SHI004475679ERR190754
SHI004375677ERR190753
SHI004275676ERR190752
SHI004175672ERR190751
SHI004075668ERR190750
SHI003975659ERR190749
SHI003875645ERR190748
SHI003775643ERR190747
SHI003675637ERR190746
SHI003575544ERR190745
SHI0034180 CFERR190744
SHI0033180 4CFERR190743
SHI0032180 2CFERR190742
SHI0031176 CFERR190741
SHI0030176 2CFERR190740
SHI0029171 CFERR190739
SHI0028170 CFERR190738
SHI0027160 CFERR190737
SHI0026160 4CFERR190736
SHI0025CF-103ERR190735
SHI0024137 CFERR190734
SHI0023137 2CFERR190733
SHI0022125 CFERR190732
SHI0021125 4CFERR190731
SHI0020125 3CFERR190730
SHI0019125 2CFERR190729
SHI0018120 CF bERR190728
SHI0017120 CF aERR190727
SHI0005BI-377ERR190715
SHI00047-27ERR190714
SHI00036-11ERR190713
SHI0002S197ERR190712
SHI009689349ERR190806
SHI009588371ERR190805
SHI009487780ERR190804
SHI009387772ERR190803
SHI009287670ERR190802
SHI009187669ERR190801
SHI009087065ERR190800
SHI008987036ERR190799
SHI008887026ERR190798
SHI008787016ERR190797
SHI008687006ERR190796
SHI008586328ERR190795
SHI008486323ERR190794
SHI008386318ERR190793
SHI008286298ERR190792
SHI008186283ERR190791
SHI008086278ERR190790
SHI007986255ERR190789
SHI007885721ERR190788
SHI007785720ERR190787
SHI007685719ERR190786
SHI007585715ERR190785
SHI007485674ERR190784
SHI007385516ERR190783
SHI007285362ERR190782
SHI007185359ERR190781
SHI007085002ERR190780
SHI006985001ERR190779
SHI006883589ERR190778
SHI006783588ERR190777
SHI006683361ERR190776
SHI006583011ERR190775
SHI006483010ERR190774
SHI006382896ERR190773
SHI006282817ERR190772
SHI006182723ERR190771
SHI006082721ERR190770
SHI005982541ERR190769
SHI005882205ERR190768
SHI005782064ERR190767
SHI0056RF-5335ERR190766
SHI0055RF-5327ERR190765
SHI005480113ERR190764
SHI005380080ERR190763
SHI0009GA-132ERR190719
SHI0008X-9ERR190718
SHI0007X-4ERR190717
SHI0006BI-378ERR190716
SHI005277257ERR190762
SHI005177231ERR190761
SHI005075915ERR190760
2199STDY5486609UnknownERR319310
2199STDY5486608UnknownERR319309
2199STDY5486607UnknownERR319308
2199STDY5486606UnknownERR319307
2199STDY5486605UnknownERR319306
2199STDY5486604UnknownERR319305
2199STDY5486603UnknownERR319304
2199STDY5486602UnknownERR319303
2199STDY5486601UnknownERR319302
2199STDY5486600UnknownERR319301
2199STDY5486599UnknownERR319300
2199STDY5486598UnknownERR319299
2199STDY5486597UnknownERR319298
2199STDY5486596UnknownERR319297
2199STDY5486595UnknownERR319296
2199STDY5486594UnknownERR319295
2199STDY5486593UnknownERR319294
2199STDY5486592UnknownERR319293
2199STDY5486591UnknownERR319292
2199STDY5486590UnknownERR319291
2199STDY5486589UnknownERR319290
2199STDY5486588UnknownERR319289
2199STDY5486587UnknownERR319288
2199STDY5486586UnknownERR319287
2199STDY5486585UnknownERR319286
2199STDY5486584UnknownERR319285
2199STDY5486583UnknownERR319284
2199STDY5486582UnknownERR319283
2199STDY5486581UnknownERR319282
2199STDY5486580UnknownERR319281
2199STDY5486579UnknownERR319280
2199STDY5486578UnknownERR319279
2199STDY5486576UnknownERR319278
2199STDY5486575UnknownERR319277
2199STDY5486574UnknownERR319276
2199STDY5486573UnknownERR319275
2199STDY5486572UnknownERR319274
2199STDY5486571UnknownERR319273
2199STDY5486570UnknownERR319272
2199STDY5486569UnknownERR319271
2199STDY5486568UnknownERR319270
2199STDY5486567UnknownERR319269
2199STDY5486566UnknownERR319268
2199STDY5486565UnknownERR319267
2199STDY5486564UnknownERR319266
2199STDY5486563UnknownERR319265
2199STDY5486562UnknownERR319264
2199STDY5486561UnknownERR319263
2199STDY5486560UnknownERR319262
2199STDY5486559UnknownERR319261
2199STDY5486558UnknownERR319260
2199STDY5486557UnknownERR319259
2199STDY5486556UnknownERR319258
2199STDY5486555UnknownERR319257
2199STDY5486554UnknownERR319256
2199STDY5486553UnknownERR319255
2199STDY5486552UnknownERR319254
2199STDY5486551UnknownERR319253
2199STDY5486550UnknownERR319252
2199STDY5486549UnknownERR319251
2199STDY5486548UnknownERR319250
2199STDY5486547UnknownERR319249
2199STDY5486546UnknownERR319248
2199STDY5486545UnknownERR319247
2199STDY5486544UnknownERR319246
2199STDY5486543UnknownERR319245
2199STDY5486542UnknownERR319244
2199STDY5486541UnknownERR319243
2199STDY5486540UnknownERR319242
2199STDY5486539UnknownERR319241
2199STDY5486538UnknownERR319240
2199STDY5486537UnknownERR319239
2199STDY5486536UnknownERR319238
2199STDY5486535UnknownERR319237
2199STDY5486534UnknownERR319236
2199STDY5486533UnknownERR319235
2199STDY5486532UnknownERR319234
2199STDY5486531UnknownERR319233
2199STDY5486530UnknownERR319232
2199STDY5486529UnknownERR319231
2199STDY5486528UnknownERR319230
2199STDY5486527UnknownERR319229
2199STDY5486526UnknownERR319228
2199STDY5486525UnknownERR319227
2199STDY5486524UnknownERR319226
2199STDY5486523UnknownERR319225
2199STDY5486522UnknownERR319224
2199STDY5486521UnknownERR319223
2199STDY5486520UnknownERR319222
2199STDY5486519UnknownERR319221
2199STDY5486518UnknownERR319220
2199STDY5486517UnknownERR319219
2199STDY5486516UnknownERR319218
2199STDY5486515UnknownERR319217
2199STDY5486514UnknownERR319216
2199STDY5486513UnknownERR319215
2199STDY5486512UnknownERR319214
2199STDY5486511UnknownERR319213
2199STDY5486510UnknownERR319212
2199STDY5486509UnknownERR319211
2199STDY5486508UnknownERR319210
2199STDY5486507UnknownERR319209
2199STDY5486506UnknownERR319208
2199STDY5486505UnknownERR319207
2199STDY5486504UnknownERR319206
2199STDY5486503UnknownERR319205
2199STDY5486502UnknownERR319204
2199STDY5486501UnknownERR319203
2199STDY5486500UnknownERR319202
2199STDY5486499UnknownERR319201
2199STDY5486498UnknownERR319200
2199STDY5486497UnknownERR319199
2199STDY5486496UnknownERR319198
2199STDY5486495UnknownERR319197
2199STDY5486494UnknownERR319196
2199STDY5486493UnknownERR319195
2199STDY5486492UnknownERR319194
2199STDY5486491UnknownERR319193
2199STDY5486490UnknownERR319192
2199STDY5486489UnknownERR319191
2199STDY5486488UnknownERR319190
2199STDY5486487UnknownERR319189
2199STDY5486486UnknownERR319188
2199STDY5486485UnknownERR319187
2199STDY5486484UnknownERR319186
2199STDY5486483UnknownERR319185
2199STDY5486482UnknownERR319184
KY_1071UnknownERR558531
KY_3246UnknownERR558530
KY_3460UnknownERR558529
KY_1629UnknownERR558528
KY_913UnknownERR558527
KY_834UnknownERR558526
KY_696UnknownERR558525
KY_129UnknownERR558524
KY_2529UnknownERR558523
KY_1163UnknownERR558522
20426786UnknownERR563033
20352044UnknownERR563032
20177848UnknownERR563031
20132055UnknownERR563030
20200753UnknownERR563029
KY_757UnknownERR563028
KY_1633UnknownERR563027
KY_1058UnknownERR563026
KY_1243UnknownERR563025
KY_276UnknownERR563024
21166370UnknownERR563023
21156548UnknownERR563022
20665428UnknownERR563021
21201783UnknownERR563020
11111889UnknownERR563019
11049313UnknownERR563018
20412581UnknownERR563017
20381207UnknownERR563016
20426788UnknownERR563015
20426787UnknownERR563014

Shigella CJ DB project

Sample

Strain

Run Accession

2200STDY5648739UnknownERR449084
2200STDY5648738UnknownERR449083
2200STDY5648737UnknownERR449082
2200STDY5648736UnknownERR449081
2200STDY5648735UnknownERR449080
2200STDY5648734UnknownERR449079
2200STDY5648674UnknownERR449076
2200STDY5648676UnknownERR449023
2200STDY5648675UnknownERR449022
2200STDY5648673UnknownERR449021
2200STDY5648672UnknownERR449020
2200STDY5648671UnknownERR449019
2200STDY5648670UnknownERR449018
2200STDY5648669UnknownERR449017
2200STDY5648668UnknownERR449016
2200STDY5648667UnknownERR449015
2200STDY5648666UnknownERR449014
2200STDY5648665UnknownERR449013
2200STDY5799357UnknownERR572950
2200STDY5799356UnknownERR572949
2200STDY5799355UnknownERR572948
2200STDY5799354UnknownERR572947
2200STDY5799353UnknownERR572946
2200STDY5799352UnknownERR572945
2200STDY5799351UnknownERR572944
2200STDY5799350UnknownERR572943
2200STDY5799349UnknownERR572942
2200STDY5799348UnknownERR572941
2200STDY5799347UnknownERR572940
2200STDY5799345UnknownERR572939
2200STDY5799344UnknownERR572938
2200STDY5799343UnknownERR572937
2200STDY5799342UnknownERR572936
2200STDY5799341UnknownERR572935
2200STDY5799340UnknownERR572934
2200STDY5799339UnknownERR572933
2200STDY5799338UnknownERR572932
2200STDY5799337UnknownERR572931
2200STDY5799336UnknownERR572930
2200STDY5799335UnknownERR572929
2200STDY5799334UnknownERR572928
2200STDY5799333UnknownERR572927
2200STDY5799332UnknownERR572926
2200STDY5799331UnknownERR572925
2200STDY5799330UnknownERR572924
2200STDY5799329UnknownERR572923
2200STDY5799327UnknownERR572922
2200STDY5799326UnknownERR572921
2200STDY5799325UnknownERR572920
2200STDY5799323UnknownERR572919
2200STDY5799322UnknownERR572918
2200STDY5799320UnknownERR572917
2200STDY5799319UnknownERR572916
2200STDY5799318UnknownERR572915
2200STDY5799315UnknownERR572914
2200STDY5799314UnknownERR572913
2200STDY5799313UnknownERR572912
2200STDY5799312UnknownERR572911
2200STDY5799311UnknownERR572910
2200STDY5799310UnknownERR572909
2200STDY5799309UnknownERR572908
2200STDY5799307UnknownERR572907
2200STDY5799306UnknownERR572906
2200STDY5799304UnknownERR572905
2200STDY5799303UnknownERR572904
2200STDY5799302UnknownERR572903
2200STDY5799300UnknownERR572902
2200STDY5799299UnknownERR572901
2200STDY5799296UnknownERR572900
2200STDY5799295UnknownERR572899
2200STDY5799294UnknownERR572898
2200STDY5799293UnknownERR572897
2200STDY5799292UnknownERR572896
2200STDY5799291UnknownERR572895
2200STDY5799290UnknownERR572894
2200STDY5799289UnknownERR572893
2200STDY5799288UnknownERR572892
2200STDY5799286UnknownERR572891
2200STDY5799285UnknownERR572890
2200STDY5799284UnknownERR572889
2200STDY5799283UnknownERR572888
2200STDY5799282UnknownERR572887
2200STDY5799281UnknownERR572886
2200STDY5799280UnknownERR572885
2200STDY5799278UnknownERR572884
2200STDY5799277UnknownERR572883
2200STDY5799276UnknownERR572882
2200STDY5799274UnknownERR572881
2200STDY5799273UnknownERR572880
2200STDY5799270UnknownERR572879
2200STDY5799269UnknownERR572878
2200STDY5799268UnknownERR572877
2200STDY5799267UnknownERR572876
2200STDY5799263UnknownERR572875

Vaccination against Shigella and ETEC

Sample

Strain

Run Accession

53G_ss53G, after several passagesERR477387
74_ss25931, PasteurERR477379
1_ss53G, as received at NVGHERR477376

Phylogeography of Shigella spp. in Southeast Asia

Sample

Strain

Run Accession

2927STDY5807811UnknownERR590907
2927STDY5807767UnknownERR590905
2927STDY5807711UnknownERR586877
2927STDY5807708UnknownERR586875
2927STDY5807706UnknownERR586874
2927STDY5807658UnknownERR586868
2927STDY5807657UnknownERR586867
2927STDY5807653UnknownERR586866
2927STDY5807616UnknownERR586862
2927STDY5807598UnknownERR586859
2927STDY5807584UnknownERR586853
2927STDY5807582UnknownERR586852
2927STDY5807571UnknownERR586847
2927STDY5807647UnknownERR590938
2927STDY5807640UnknownERR590932
2927STDY5807639UnknownERR590931
2927STDY5807670UnknownERR590954
2927STDY5807669UnknownERR590953
2927STDY5807668UnknownERR590952
2927STDY5807656UnknownERR590946
2927STDY5807655UnknownERR590945
2927STDY5807652UnknownERR590943
2927STDY5807651UnknownERR590942
2927STDY5807650UnknownERR590941
2927STDY5807649UnknownERR590940
2927STDY5807648UnknownERR590939
2927STDY5807689UnknownERR590973
2927STDY5807688UnknownERR590972
2927STDY5807679UnknownERR590963
2927STDY5807713UnknownERR590990
2927STDY5807705UnknownERR590988
2927STDY5807702UnknownERR590986
2927STDY5807701UnknownERR590985
2927STDY5807699UnknownERR590983
2927STDY5807697UnknownERR590981
2927STDY5807696UnknownERR590980
2927STDY5807692UnknownERR590976
2927STDY5807749UnknownERR591024
2927STDY5807747UnknownERR591022
2927STDY5807745UnknownERR591020
2927STDY5807744UnknownERR591019
2927STDY5807740UnknownERR591015
2927STDY5807721UnknownERR590996
2927STDY5807720UnknownERR590995
2927STDY5807715UnknownERR590992
2927STDY5807714UnknownERR590991
2927STDY5807781UnknownERR591053
2927STDY5807780UnknownERR591052
2927STDY5807779UnknownERR591051
2927STDY5807777UnknownERR591050
2927STDY5807775UnknownERR591048
2927STDY5807774UnknownERR591047
2927STDY5807769UnknownERR591042
2927STDY5807768UnknownERR591041
2927STDY5807766UnknownERR591040
2927STDY5807765UnknownERR591039
2927STDY5807764UnknownERR591038
2927STDY5807763UnknownERR591037
2927STDY5807761UnknownERR591035
2927STDY5807760UnknownERR591034
2927STDY5807759UnknownERR591033
2927STDY5807758UnknownERR591032
2927STDY5807756UnknownERR591030
2927STDY5807733UnknownERR591008
2927STDY5807818UnknownERR591088
2927STDY5807815UnknownERR591085
2927STDY5807814UnknownERR591084
2927STDY5807813UnknownERR591083
2927STDY5807795UnknownERR591067
2927STDY5807794UnknownERR591066
2927STDY5807793UnknownERR591065
2927STDY5807829UnknownERR591098
2927STDY5807827UnknownERR591097
2927STDY5807826UnknownERR591096
2927STDY5807825UnknownERR591095
2927STDY5807824UnknownERR591094
2927STDY5807823UnknownERR591093
2927STDY5807822UnknownERR591092
2927STDY5807821UnknownERR591091
2927STDY5807820UnknownERR591090
2927STDY5807819UnknownERR591089
2927STDY5808904UnknownERR592283
2927STDY5808894UnknownERR592275
2927STDY5808892UnknownERR592273
2927STDY5808891UnknownERR592272
2927STDY5808890UnknownERR592271
2927STDY5808889UnknownERR592270
2927STDY5808888UnknownERR592269
2927STDY5808886UnknownERR592267
2927STDY5808885UnknownERR592266
2927STDY5808884UnknownERR592265
2927STDY5808880UnknownERR592263
2927STDY5808878UnknownERR592262
2927STDY5808877UnknownERR592261
2927STDY5808875UnknownERR592260
2927STDY5808874UnknownERR592259
2927STDY5808873UnknownERR592258
2927STDY5808872UnknownERR592257
2927STDY5808869UnknownERR592254
2927STDY5808867UnknownERR592253
2927STDY5808863UnknownERR592249
2927STDY5808862UnknownERR592248
2927STDY5808860UnknownERR592247
2927STDY5808858UnknownERR592246
2927STDY5808856UnknownERR592244
2927STDY5808855UnknownERR592243
2927STDY5808850UnknownERR592239
2927STDY5808848UnknownERR592237
2927STDY5808847UnknownERR592236
2927STDY5808846UnknownERR592235
2927STDY5808845UnknownERR592234
2927STDY5808842UnknownERR592232
2927STDY5808841UnknownERR592231
2927STDY5808840UnknownERR592230
2927STDY5808839UnknownERR592229
2927STDY5808838UnknownERR592228
2927STDY5808837UnknownERR592227
2927STDY5808836UnknownERR592226
2927STDY5808835UnknownERR592225
2927STDY5808833UnknownERR592223
2927STDY5808832UnknownERR592222
2927STDY5808830UnknownERR592220
2927STDY5808829UnknownERR592219
2927STDY5808828UnknownERR592218
2927STDY5808827UnknownERR592217
2927STDY5808825UnknownERR592215
2927STDY5808823UnknownERR592213
2927STDY5808820UnknownERR592210
2927STDY5808817UnknownERR592207
2927STDY5808816UnknownERR592206
2927STDY5808815UnknownERR592205
2927STDY5808807UnknownERR592197
2927STDY5808801UnknownERR592192
2927STDY5808800UnknownERR592191
2927STDY5808799UnknownERR592190
2927STDY5808798UnknownERR592189
2927STDY5808796UnknownERR592187
2927STDY5808794UnknownERR592185
2927STDY5808793UnknownERR592184
2927STDY5808791UnknownERR592182
2927STDY5808790UnknownERR592181
2927STDY5808789UnknownERR592180
2927STDY5808788UnknownERR592179
2927STDY5808785UnknownERR592176
2927STDY5808784UnknownERR592175
2927STDY5808782UnknownERR592173
2927STDY5808781UnknownERR592172
2927STDY5808774UnknownERR592165
2927STDY5808773UnknownERR592164
2927STDY5808771UnknownERR592162
2927STDY5808770UnknownERR592161
2927STDY5808768UnknownERR592159
2927STDY5808767UnknownERR592158
2927STDY5808764UnknownERR592156
2927STDY5808763UnknownERR592155
2927STDY5808762UnknownERR592154
2927STDY5808761UnknownERR592153
2927STDY5808760UnknownERR592152
2927STDY5808759UnknownERR592151
2927STDY5808758UnknownERR592150
2927STDY5808757UnknownERR592149
2927STDY5808756UnknownERR592148
2927STDY5808754UnknownERR592147
2927STDY5808753UnknownERR592146
2927STDY5808751UnknownERR592144
2927STDY5808748UnknownERR592141
2927STDY5808747UnknownERR592140
2927STDY5808746UnknownERR592139
2927STDY5808744UnknownERR592138
2927STDY5808738UnknownERR592134
2927STDY5808737UnknownERR592133
2927STDY5808735UnknownERR592132
2927STDY5808734UnknownERR592131
2927STDY5808733UnknownERR592130
2927STDY5808732UnknownERR592129
2927STDY5808731UnknownERR592128
2927STDY5808727UnknownERR592126
2927STDY5808726UnknownERR592125
2927STDY5808724UnknownERR592123
2927STDY5808723UnknownERR592122
2927STDY5808722UnknownERR592121
2927STDY5808719UnknownERR592119
2927STDY5808718UnknownERR592118
2927STDY5808717UnknownERR592117
2927STDY5808713UnknownERR592113
2927STDY5808711UnknownERR592111
2927STDY5808709UnknownERR592109
2927STDY5808708UnknownERR592108
2927STDY5808707UnknownERR592107
2927STDY5808706UnknownERR592106
2927STDY5808705UnknownERR592105
2927STDY5808703UnknownERR592103
2927STDY5808702UnknownERR592102
2927STDY5808701UnknownERR592101
2927STDY5808699UnknownERR592099
2927STDY5808698UnknownERR592098
2927STDY5808697UnknownERR592097
2927STDY5808695UnknownERR592095
2927STDY5808693UnknownERR592093
2927STDY5808692UnknownERR592092
2927STDY5808691UnknownERR592091
2927STDY5808690UnknownERR592090
2927STDY5808689UnknownERR592089
2927STDY5808684UnknownERR592084
2927STDY5808683UnknownERR592083
2927STDY5808682UnknownERR592082
2927STDY5808678UnknownERR592078
2927STDY5808677UnknownERR592077
2927STDY5808674UnknownERR592074
2927STDY5808671UnknownERR592071
2927STDY5808670UnknownERR592070
2927STDY5808668UnknownERR592069
2927STDY5808666UnknownERR592067
2927STDY5808665UnknownERR592066
2927STDY5808664UnknownERR592065
2927STDY5808660UnknownERR592061
2927STDY5808658UnknownERR592059
2927STDY5808654UnknownERR592055
2927STDY5808638UnknownERR592039
2927STDY5808635UnknownERR592036
2927STDY5808634UnknownERR592035
2927STDY5808630UnknownERR592032
2927STDY5808628UnknownERR592030
2927STDY5808622UnknownERR592025
2927STDY5808619UnknownERR592023
2927STDY5808612UnknownERR592019
2927STDY5808602UnknownERR592013
2927STDY5808592UnknownERR592007
2927STDY5808591UnknownERR592006
2927STDY5808582UnknownERR591999
2927STDY5808563UnknownERR591982
2927STDY5808552UnknownERR591971
2927STDY5808549UnknownERR591968
2927STDY5808543UnknownERR591963
2927STDY5808541UnknownERR591961
2927STDY5808533UnknownERR591956
2927STDY5808530UnknownERR591953
2927STDY5808529UnknownERR591952
2927STDY5808526UnknownERR591949
2927STDY5808525UnknownERR591948
2927STDY5808522UnknownERR591946
2927STDY5808521UnknownERR591945
2927STDY5808520UnknownERR591944
2927STDY5808519UnknownERR591943
2927STDY5808516UnknownERR591940
2927STDY5808515UnknownERR591939
2927STDY5808513UnknownERR591937
2927STDY5808512UnknownERR591936
2927STDY5808510UnknownERR591934
2927STDY5808508UnknownERR591932
2927STDY5808500UnknownERR591924
2927STDY5808499UnknownERR591923
2927STDY5808497UnknownERR591921
2927STDY5808495UnknownERR591919
2927STDY5808494UnknownERR591918
2927STDY5808493UnknownERR591917
2927STDY5808489UnknownERR591913
2927STDY5808484UnknownERR591908
2927STDY5808465UnknownERR591891
2927STDY5808464UnknownERR591890
2927STDY5808461UnknownERR591888
2927STDY5808460UnknownERR591887
2927STDY5808455UnknownERR591883
2927STDY5808453UnknownERR591881
2927STDY5808447UnknownERR591876
2927STDY5808444UnknownERR591873
2927STDY5808440UnknownERR591870
2927STDY5808430UnknownERR591861
2927STDY5808429UnknownERR591860
2927STDY5808428UnknownERR591859
2927STDY5808424UnknownERR591855
2927STDY5808407UnknownERR591840
2927STDY5808400UnknownERR591834
2927STDY5808398UnknownERR591832
2927STDY5808395UnknownERR591829
2927STDY5808394UnknownERR591828
2927STDY5808393UnknownERR591827
2927STDY5808391UnknownERR591825
2927STDY5808388UnknownERR591822
2927STDY5808385UnknownERR591819
2927STDY5808384UnknownERR591818
2927STDY5808382UnknownERR591816
2927STDY5808380UnknownERR591815
2927STDY5808372UnknownERR591807
2927STDY5808368UnknownERR591804
2927STDY5808365UnknownERR591801
2927STDY5808364UnknownERR591800
2927STDY5808358UnknownERR591794
2927STDY5808355UnknownERR591791
2927STDY5808351UnknownERR591787
2927STDY5808343UnknownERR591779
2927STDY5808339UnknownERR591775
2927STDY5808338UnknownERR591774
2927STDY5808337UnknownERR591773
2927STDY5808335UnknownERR591771
2927STDY5808334UnknownERR591770
2927STDY5808331UnknownERR591767
2927STDY5808330UnknownERR591766
2927STDY5808326UnknownERR591762
2927STDY5808325UnknownERR591761
2927STDY5808322UnknownERR591758
2927STDY5808321UnknownERR591757
2927STDY5808320UnknownERR591756
2927STDY5808314UnknownERR591751
2927STDY5808313UnknownERR591750
2927STDY5808310UnknownERR591747
2927STDY5808309UnknownERR591746
2927STDY5808302UnknownERR591740
2927STDY5808300UnknownERR591738
2927STDY5808290UnknownERR591728
2927STDY5808287UnknownERR591725
2927STDY5808277UnknownERR591718
2927STDY5808271UnknownERR591712
2927STDY5808264UnknownERR591706
2927STDY5808261UnknownERR591703
2927STDY5808259UnknownERR591701
2927STDY5808258UnknownERR591700
2927STDY5808255UnknownERR591697
2927STDY5808252UnknownERR591694
2927STDY5808250UnknownERR591692
2927STDY5808243UnknownERR591686
2927STDY5808238UnknownERR591681
2927STDY5808234UnknownERR591677
2927STDY5808232UnknownERR591675
2927STDY5808229UnknownERR591672
2927STDY5808225UnknownERR591669
2927STDY5808219UnknownERR591663
2927STDY5808218UnknownERR591662
2927STDY5808217UnknownERR591661
2927STDY5808216UnknownERR591660
2927STDY5808210UnknownERR591654
2927STDY5808209UnknownERR591653
2927STDY5808208UnknownERR591652
2927STDY5808206UnknownERR591650
2927STDY5808205UnknownERR591649
2927STDY5808204UnknownERR591648
2927STDY5808203UnknownERR591647
2927STDY5808183UnknownERR591638
2927STDY5808163UnknownERR591620
2927STDY5808160UnknownERR591617
2927STDY5808159UnknownERR591616
2927STDY5808158UnknownERR591615
2927STDY5808157UnknownERR591614
2927STDY5808156UnknownERR591613
2927STDY5808153UnknownERR591611
2927STDY5808152UnknownERR591610
2927STDY5808151UnknownERR591609
2927STDY5808150UnknownERR591608
2927STDY5808140UnknownERR591598
2927STDY5808139UnknownERR591597
2927STDY5808138UnknownERR591596
2927STDY5808137UnknownERR591595
2927STDY5808132UnknownERR591592
2927STDY5808131UnknownERR591591
2927STDY5808130UnknownERR591590
2927STDY5808128UnknownERR591588
2927STDY5808123UnknownERR591585
2927STDY5808122UnknownERR591584
2927STDY5808116UnknownERR591580
2927STDY5808115UnknownERR591579
2927STDY5808114UnknownERR591578
2927STDY5808113UnknownERR591577
2927STDY5808107UnknownERR591574
2927STDY5808106UnknownERR591573
2927STDY5808105UnknownERR591572
2927STDY5808104UnknownERR591571
2927STDY5808103UnknownERR591570
2927STDY5808097UnknownERR591564
2927STDY5808096UnknownERR591563
2927STDY5808095UnknownERR591562
2927STDY5808094UnknownERR591561
2927STDY5808088UnknownERR591556
2927STDY5808087UnknownERR591555
2927STDY5808086UnknownERR591554
2927STDY5808085UnknownERR591553
2927STDY5808082UnknownERR591550
2927STDY5808073UnknownERR591541
2927STDY5808072UnknownERR591540
2927STDY5808065UnknownERR591533
2927STDY5808039UnknownERR591508
2927STDY5808026UnknownERR591496
2927STDY5808021UnknownERR591495
2927STDY5808003UnknownERR591481
2927STDY5808002UnknownERR591480
2927STDY5808001UnknownERR591479
2927STDY5807996UnknownERR591476
2927STDY5807995UnknownERR591475
2927STDY5807989UnknownERR591469
2927STDY5807988UnknownERR591468
2927STDY5807987UnknownERR591467
2927STDY5807986UnknownERR591466
2927STDY5807985UnknownERR591465
2927STDY5807983UnknownERR591463
2927STDY5807980UnknownERR591460
2927STDY5807979UnknownERR591459
2927STDY5807978UnknownERR591458
2927STDY5807977UnknownERR591457
2927STDY5807976UnknownERR591456
2927STDY5807970UnknownERR591450
2927STDY5807966UnknownERR591446
2927STDY5807965UnknownERR591445
2927STDY5807961UnknownERR591441
2927STDY5807960UnknownERR591440
2927STDY5807951UnknownERR591432
2927STDY5808879UnknownERR591412
2927STDY5808745UnknownERR591411
2927STDY5808742UnknownERR591410
2927STDY5808740UnknownERR591409
2927STDY5808728UnknownERR591407
2927STDY5808721UnknownERR591406
2927STDY5808633UnknownERR591405
2927STDY5808523UnknownERR591394
2927STDY5808463UnknownERR591393
2927STDY5808316UnknownERR591389
2927STDY5808025UnknownERR591364
2927STDY5808012UnknownERR591359
2927STDY5807948UnknownERR591356
2927STDY5807886UnknownERR591348
2927STDY5807872UnknownERR591344
2927STDY5807871UnknownERR591343
2927STDY5807870UnknownERR591342
2927STDY5807868UnknownERR591341
2927STDY5807866UnknownERR591340
2927STDY5807864UnknownERR591339
2927STDY5807862UnknownERR591338
2927STDY5807949UnknownERR591335
2927STDY5807947UnknownERR591334
2927STDY5807939UnknownERR591326
2927STDY5807938UnknownERR591325
2927STDY5807937UnknownERR591324
2927STDY5807936UnknownERR591323
2927STDY5807925UnknownERR591313
2927STDY5807914UnknownERR591304
2927STDY5807902UnknownERR591295
2927STDY5807900UnknownERR591294
2927STDY5807899UnknownERR591293
2927STDY5807883UnknownERR591282
2927STDY5807877UnknownERR591277
2927STDY5807873UnknownERR591275
2927STDY5807869UnknownERR591274
2927STDY5807867UnknownERR591273
2927STDY5807865UnknownERR591272
2927STDY5807863UnknownERR591271
2927STDY5807861UnknownERR591270
2927STDY5807860UnknownERR591269
2927STDY5807859UnknownERR591268
2927STDY5807608UnknownERR591236
2927STDY5807607UnknownERR591235
2927STDY5807593UnknownERR591229
2927STDY5807581UnknownERR591227
2927STDY5808736UnknownERR591408
2927STDY5807755UnknownERR586880

Discovery of sequence diversity in Shigella sp.

Sample

Strain

Run Accession

MS004MS004ERR019762
MS011MS011ERR019765
MS032MS032ERR019766
MS034MS034ERR019767
MS035MS035ERR019768
MS039MS039ERR019769
MS042MS042ERR019770
MS048MS048ERR019771
MS063MS063ERR019772
MS065MS065ERR019763
MS069MS069ERR019764
MS070MS070ERR019774
MS080MS080ERR019777
MS083MS083ERR019778
MS102MS102ERR019779
MS110MS110ERR019780
MS122MS122ERR019781
MS127MS127ERR019782
MS128MS128ERR019783
MS111MS111ERR019784
MS119MS119ERR019775
DE885DE885ERR019776
DE248DE248ERR019786
DE1150DE1150ERR019789
DE891DE891ERR019790
DE1318DE1318ERR019791
DE1208DE1208ERR019792
DE655DE655ERR019793
DE115DE115ERR019794
DE1209DE1209ERR019795
DE427DE427ERR019796
DE654DE654ERR019787
DE837DE837ERR019788
DE127DE127ERR019798
DE965DE965ERR019801
DE489DE489ERR019802
DE1063DE1063ERR019803
DE1198DE1198ERR019804
DE490DE490ERR019805
DE210DE210ERR019806
DE1486DE1486ERR019807
DE900DE900ERR019808
DE846DE846ERR019799
DE306DE306ERR019800
DE1140DE1140ERR019810
DE330DE330ERR019813
DE816DE816ERR019814
DE303DE303ERR019815
DE199DE199ERR019816
DE1191DE1191ERR019817
DE1336DE1336ERR019818
EG467EG467ERR019819
EG304EG304ERR019820
EG472EG472ERR019811
EG365EG365ERR019812
EG255EG255ERR019822
EG318EG318ERR019825
EG386EG386ERR019826
EG379EG379ERR019827
EG385EG385ERR019828
EG369EG369ERR019829
EG388EG388ERR019830
EG394EG394ERR019831
EG309EG309ERR019832
EG315EG315ERR019823
EG357EG357ERR019824
EG159EG159ERR017664
EG313EG313ERR017667
EG392EG392ERR017668
EG129EG129ERR017669
EG383EG383ERR017670
EG352EG352ERR017671
EG401EG401ERR017672
EG393EG393ERR017673
EG372EG372ERR017674
EG375EG375ERR017665
EG410EG410ERR017666
EG451EG451ERR019834
EG362EG362ERR019837
EG425EG425ERR019838
EG404EG404ERR019839
DE295DE295ERR019840
EG204EG204ERR019841
DE1256DE1256ERR019842
DE1165DE1165ERR019843
EG1001EG1001ERR019844
DE477DE477ERR019835
DE1404DE1404ERR019836
EG1008EG1008ERR017676
EG1004EG1004ERR017685
DE611DE611ERR017684
EG430EG430ERR017683
EG356EG356ERR017682
DE579DE579ERR017681
DE685DE685ERR017680
EG373EG373ERR017679
EG395EG395ERR017678
EG390EG390ERR017677
2005127220051272ERR024063
2005127220051272ERR028671
1991076119910761ERR024067
1991076119910761ERR028675
2004136720041367ERR024068
2004136720041367ERR028676
2006001820060018ERR024069
2006001820060018ERR028677
2008188520081885ERR024070
2008188520081885ERR028678
2004088020040880ERR024071
2004088020040880ERR028679
CS2CS2ERR024072
CS2CS2ERR028680
2005154120051541ERR024073
2005154120051541ERR028681
2006149720061497ERR024074
2006149720061497ERR028682
2006175820061758ERR024064
2006175820061758ERR028672
1991148319911483ERR024065
1991148319911483ERR028673
1992031919920319ERR024066
1992031919920319ERR028674
2006130920061309ERR024076
2006130920061309ERR028684
2000359320003593ERR024080
2000359320003593ERR028688
2002112220021122ERR024081
2002112220021122ERR028689
2003127520031275ERR024082
2003127520031275ERR028690
1998412319984123ERR024083
1998412319984123ERR028691
2004048920040489ERR024084
2004048920040489ERR028692
2005263120052631ERR024085
2005263120052631ERR028693
1990401119904011ERR024086
1990401119904011ERR028694
2001168520011685ERR024087
2001168520011685ERR028695
CS20CS20ERR024077
CS20CS20ERR028685
CS6CS6ERR024078
CS6CS6ERR028686
CS14CS14ERR024079
CS14CS14ERR028687
2004092420040924ERR024089
2004092420040924ERR028697
2006208720062087ERR024091
2006208720062087ERR028699
2007159920071599ERR024092
2007159920071599ERR028700
1994295019942950ERR024093
1994295019942950ERR028701
2001000720010007ERR024094
2001000720010007ERR028702
2006231320062313ERR024095
2006231320062313ERR028703
CS7CS7ERR024096
CS7CS7ERR028704
CS8CS8ERR024097
CS8CS8ERR028705
CS1CS1ERR024098
CS1CS1ERR028706
046Ss046 DNAERR024090
046Ss046 DNAERR028698
ShIB695695.0ERR025682
ShIB696696.0ERR025686
ShIB697697.0ERR025687
ShIB698698.0ERR025688
ShIB713713.0ERR025689
ShIB716716.0ERR025690
ShIB717717.0ERR025691
ShIB739739.0ERR025692
ShIB748748.0ERR025693
ShIB19701970.0ERR025683
ShIB19761976.0ERR025684
ShIB19801980.0ERR025685
ShIB19851985.0ERR025695
ShIB19871987.0ERR025699
ShIB19901990.0ERR025700
ShIB19931993.0ERR025701
ShIB19951995.0ERR025702
ShIB19971997.0ERR025703
ShIB20002000.0ERR025704
ShIB20042004.0ERR025705
ShIB20082008.0ERR025706
ShIB20092009.0ERR025696
ShIB20122012.0ERR025697
ShIB20132013.0ERR025698
ShIB20152015.0ERR025708
ShIB20182018.0ERR025712
ShIB20242024.0ERR025713
ShIB20262026.0ERR025714
ShIB24932493.0ERR025715
ShIB48279482-79ERR025716
ShIB32773277.0ERR025717
ShIB33003300.0ERR025718
ShIB33743374.0ERR025719
ShIB34883488.0ERR025709
ShIB35073507.0ERR025710
ShIB35803580.0ERR025711
ShIB35993599.0ERR025721
PWR105PWR105ERR025725
Sh5417854178.0ERR025726
Sh5417954179.0ERR025727
Sh5418154181.0ERR025728
Sh5418454184.0ERR025729
Sh5418554185.0ERR025730
Sh5419054190.0ERR025731
Sh5421054210.0ERR025732
Sh5421354213.0ERR025722
Sh5421654216.0ERR025723
Sh5422854228.0ERR025724
Sh6586-58ERR025734
Sh2592-59ERR025737
Sh146014-60ERR025738
Sh146114-61ERR025739
Sh176117-61ERR025740
Sh126312-63ERR025741
Sh126512-65ERR025742
Sh116611-66ERR025743
Sh116711-67ERR025744
Sh126712-67ERR025735
Sh156715-67ERR025736
Sh117311-73ERR025746
Sh207320-73ERR025749
Sh2732-73ERR025750
Sh3733-73ERR025751
Sh127412-74ERR025752
Sh257425-74ERR025753
Sh437443-74ERR025754
Sh447444-74ERR025755
Sh4764-76ERR025756
Sh888388-83ERR025747
Sh970044#97 0044ERR025748
Sh988743#98 8743ERR025758
Sh989560#98 9560ERR025761
Sh9810267#9810267ERR025762
Sh998911#99 8911ERR025763
Sh2225#00 2225ERR025764
Sh5827#00 5827ERR025765
Sh30903#03 0903ERR025766
Sh31382#03 1382ERR025767
Sh32222#03 2222ERR025768
Sh36224#03 6224ERR025759
Sh38624#03 8624ERR025760
Sh41191#04 1191ERR024604
Sh55623#05 5623ERR024607
Sh60108#06 0108ERR024608
Sh62542#06 2542ERR024609
Sh65179#06 5179ERR024610
Sh65387#06 5387ERR024611
Sh65623#06 5623ERR024612
Sh66134#06 6134ERR024613
Sh66396#06 6396ERR024614
Sh66470#06 6470ERR024605
Sh74369#07 4369ERR024606
ShIB11.0ERR024616
ShIB22.0ERR024620
ShIB33.0ERR024621
ShIB1010.0ERR024622
ShIB5656.0ERR024623
ShIB6161.0ERR024624
ShIB681681.0ERR024625
ShIB683683.0ERR024626
ShIB687687.0ERR024627
ShIB690690.0ERR024617
ShIB691691.0ERR024618
ShIB694694.0ERR024619
SS7567675676ERR045189
SS8008080080ERR045190
SS8500185001ERR045191
SS8281782817ERR045192
SS8571585715ERR045193
SS8526185261ERR045194
SS9523395233ERR045195
SS9578095780ERR045196
SS9944499444ERR045197
SS9827498274ERR045198
SS106312106312ERR045199
SS105559105559ERR045200
SS109305109305ERR047210
SS109114109114ERR047211
SS117886117886ERR047212
SS117077117077ERR047213
SS127358127358ERR047214
SS129050129050ERR047215
SS127858127858ERR047216
SS128220128220ERR047217
SS128716128716ERR047218
SS129764129764ERR047219
SS130327130327ERR047220
SS131636131636ERR047221
SS132068132068ERR039524
SS132330132330ERR039525
SS133242133242ERR039526
SS133628133628ERR039527
SS134791134791ERR039528
SS136782136782ERR039529

Data Use Statement

This sequencing centre plans on publishing the completed and annotated sequences in a peer-reviewed journal as soon as possible. Permission of the principal investigator should be obtained before publishing analyses of the sequence/open reading frames/genes on a chromosome or genome scale. See our data sharing policy.

Sequencing enquiries

Please address all sequencing enquiries to: pathinfo@sanger.ac.uk

* quick link - http://q.sanger.ac.uk/c3wynr2p