Shigella sonnei

Data Downloads

This project is ongoing and data for this organism will be made available in due course.

[Genome Research Limited]

Shigella sonnei & flexneri from around the world

Sample

Strain

Run Accession
SH0001sh02-7265ERR042775
SH0002sh02-8933ERR042776
SH0003sh02-9633ERR042777
SH0004sh03-0995ERR042778
SH0005sh03-1223ERR042779
SH0006sh03-3567ERR042780
SH0007sh03-7022ERR042781
SH0008sh07-0426ERR042782
SH0009sh07-1018ERR042783
SH0010sh07-1608ERR042784
SH0011sh07-1910ERR042785
SH0012sh07-2004ERR042786
SH0013sh07-2224ERR042787
SH0014sh96-1420ERR042788
SH0015sh96-2938ERR042789
SH0016sh96-5282ERR042790
SH0017sh96-6494ERR042791
SH0018F3189ERR042792
SH0019F3342ERR042793
SH0020sh03-1382ERR042794
SH0021F3183ERR042795
sh0200H1 1258 0301ERR103471
sh0201H1 1262 0252ERR103472
sh0202H1 1244 0349ERR103473
sh0203H1 1270 0288ERR103474
sh0204H1 1292 0489ERR103475
sh0205H1 1308 0349ERR103476
sh0206H1 1310 0099ERR103477
sh0207H1 1308 0358ERR103478

Temporal & geographical Shigella genus diversity in Southern Vietnam 1994-2011

Sample

Strain

Run Accession
1001410014ERR049134
1002110021ERR049135
1003110031ERR049136
1003510035ERR049137
1006010060ERR049138
1006310063ERR049139
1007110071ERR049140
1007310073ERR049141
1008310083ERR049142
1009310093ERR049143
1010210102ERR049144
1011110111ERR049145
1011510115ERR049146
1013410134ERR049147
1013510135ERR049148
1015210152ERR049149
1015910159ERR049150
1018810188ERR049151
1026310263ERR049153
1032010320ERR049154
1036510365ERR049155
2000620006ERR047311
2002120021ERR047312
2002320023ERR047313
2003720037ERR047314
2007020070ERR047315
2009420094ERR047316
2022820228ERR047317
2026120261ERR047318
2026320263ERR047319
2034320343ERR047320
3000330003ERR047321
3000830008ERR047322
3001030010ERR047323
3003730037ERR047324
3005430054ERR047325
3005930059ERR047326
3007130071ERR047327
3007330073ERR047328
3010030100ERR047330
3011230112ERR047331
3012430124ERR047332
3016230162ERR047334
3016430164ERR047335
3016930169ERR047336
3017230172ERR047337
3017430174ERR047338
3023330233ERR047339
3029330293ERR047340
3036630366ERR047341
3037130371ERR047342
3038730387ERR047343
3045030450ERR047344
3045130451ERR047345
EG1014EG1014ERR047411
EG1015EG1015ERR047412
EG1016EG1016ERR047413
EG1017EG1017ERR047414
EG1018EG1018ERR047415
EG1019EG1019ERR047416
EG1020EG1020ERR047417
EG1021EG1021ERR047418
EG1022EG1022ERR047419
EG1023EG1023ERR047420
EG1024EG1024ERR047421
EG1025EG1025ERR047422
EG1026EG1026ERR047423
EG1027EG1027ERR047424
EG1028EG1028ERR047425
EG1029EG1029ERR047426
HUE01HUE01ERR047427
HUE02HUE02ERR047428
HUE05HUE05ERR047431
HUE16HUE16ERR047441
HUE17HUE17ERR047442
HUE19HUE19ERR047444
HUE20HUE20ERR047445
HUE21HUE21ERR047446
HUE22HUE22ERR047447
HUE23HUE23ERR047448
HUE24HUE24ERR047449
HUE25HUE25ERR047450
HUE26HUE26ERR047451
HUE27HUE27ERR047452
HUE29HUE29ERR047453
HUE30HUE30ERR047454
HUE31HUE31ERR047455
HUE32HUE32ERR047456
HUE33HUE33ERR047457
HUE34HUE34ERR047458
HUE36HUE36ERR047460
HUE40HUE40ERR047461
HUE42HUE42ERR047462
HUE43HUE43ERR047463
HUE46HUE46ERR047464
HUE47HUE47ERR047465
HUE48HUE48ERR047466
HUE50HUE50ERR047223
HUE53HUE53ERR047224
HUE55HUE55ERR047226
HUE57HUE57ERR047228
HUE58HUE58ERR047229
HUE60HUE60ERR047230
HUE62HUE62ERR047232
HUE64HUE64ERR047234
HUE67HUE67ERR047237
HUE68HUE68ERR047238
KH02KH02ERR047240
KH04KH04ERR047241
KH05KH05ERR047242
KH06KH06ERR047243
KH07KH07ERR047244
KH09KH09ERR047245
KH10KH10ERR047246
KH11KH11ERR047247
KH12KH12ERR047248
KH13KH13ERR047249
KH14KH14ERR047250
KH15KH15ERR047251
KH16KH16ERR047252
KH17KH17ERR047253
KH18KH18ERR047254
KH19KH19ERR047255
KH20KH20ERR047256
KH21KH21ERR047257
KH23KH23ERR047258
KH24KH24ERR047259
KH25KH25ERR047260
KH26KH26ERR047261
KH27KH27ERR047262
KH28KH28ERR047263
KH29KH29ERR047264
KH30KH30ERR047265
KH32KH32ERR047266
KH33KH33ERR047267
KH34KH34ERR047268
KH35KH35ERR047269
KH37KH37ERR047270
KH38KH38ERR047271
KH40KH40ERR047273
KH41KH41ERR047274
KH42KH42ERR047275
KH43KH43ERR047276
KH45KH45ERR047277
KH53KH53ERR047283
KH54KH54ERR047284
KH55KH55ERR047285
KH57KH57ERR047286
MS0043MS0043ERR047304
MS0094MS0094ERR048239

Discovery of sequence diversity in Shigella sp.

Sample

Strain

Run Accession
MS004MS004ERR019762
MS011MS011ERR019765
MS032MS032ERR019766
MS034MS034ERR019767
MS035MS035ERR019768
MS039MS039ERR019769
MS042MS042ERR019770
MS048MS048ERR019771
MS063MS063ERR019772
MS065MS065ERR019763
MS069MS069ERR019764
MS070MS070ERR019774
MS080MS080ERR019777
MS083MS083ERR019778
MS102MS102ERR019779
MS110MS110ERR019780
MS122MS122ERR019781
MS127MS127ERR019782
MS128MS128ERR019783
MS111MS111ERR019784
MS119MS119ERR019775
DE885DE885ERR019776
DE248DE248ERR019786
DE1150DE1150ERR019789
DE891DE891ERR019790
DE1318DE1318ERR019791
DE1208DE1208ERR019792
DE655DE655ERR019793
DE115DE115ERR019794
DE1209DE1209ERR019795
DE427DE427ERR019796
DE654DE654ERR019787
DE837DE837ERR019788
DE127DE127ERR019798
DE965DE965ERR019801
DE489DE489ERR019802
DE1063DE1063ERR019803
DE1198DE1198ERR019804
DE490DE490ERR019805
DE210DE210ERR019806
DE1486DE1486ERR019807
DE900DE900ERR019808
DE846DE846ERR019799
DE306DE306ERR019800
DE1140DE1140ERR019810
DE330DE330ERR019813
DE816DE816ERR019814
DE303DE303ERR019815
DE199DE199ERR019816
DE1191DE1191ERR019817
DE1336DE1336ERR019818
EG467EG467ERR019819
EG304EG304ERR019820
EG472EG472ERR019811
EG365EG365ERR019812
EG255EG255ERR019822
EG318EG318ERR019825
EG386EG386ERR019826
EG379EG379ERR019827
EG385EG385ERR019828
EG369EG369ERR019829
EG388EG388ERR019830
EG394EG394ERR019831
EG309EG309ERR019832
EG315EG315ERR019823
EG357EG357ERR019824
EG159EG159ERR017664
EG313EG313ERR017667
EG392EG392ERR017668
EG129EG129ERR017669
EG383EG383ERR017670
EG352EG352ERR017671
EG401EG401ERR017672
EG393EG393ERR017673
EG372EG372ERR017674
EG375EG375ERR017665
EG410EG410ERR017666
EG451EG451ERR019834
EG362EG362ERR019837
EG425EG425ERR019838
EG404EG404ERR019839
DE295DE295ERR019840
EG204EG204ERR019841
DE1256DE1256ERR019842
DE1165DE1165ERR019843
EG1001EG1001ERR019844
DE477DE477ERR019835
DE1404DE1404ERR019836
EG1008EG1008ERR017676
EG1004EG1004ERR017685
DE611DE611ERR017684
EG430EG430ERR017683
EG356EG356ERR017682
DE579DE579ERR017681
DE685DE685ERR017680
EG373EG373ERR017679
EG395EG395ERR017678
EG390EG390ERR017677
2005127220051272ERR024063
2005127220051272ERR028671
1991076119910761ERR024067
1991076119910761ERR028675
2004136720041367ERR024068
2004136720041367ERR028676
2006001820060018ERR024069
2006001820060018ERR028677
2008188520081885ERR024070
2008188520081885ERR028678
2004088020040880ERR024071
2004088020040880ERR028679
CS2CS2ERR024072
CS2CS2ERR028680
2005154120051541ERR024073
2005154120051541ERR028681
2006149720061497ERR024074
2006149720061497ERR028682
2006175820061758ERR024064
2006175820061758ERR028672
1991148319911483ERR024065
1991148319911483ERR028673
1992031919920319ERR024066
1992031919920319ERR028674
2006130920061309ERR024076
2006130920061309ERR028684
2000359320003593ERR024080
2000359320003593ERR028688
2002112220021122ERR024081
2002112220021122ERR028689
2003127520031275ERR024082
2003127520031275ERR028690
1998412319984123ERR024083
1998412319984123ERR028691
2004048920040489ERR024084
2004048920040489ERR028692
2005263120052631ERR024085
2005263120052631ERR028693
1990401119904011ERR024086
1990401119904011ERR028694
2001168520011685ERR024087
2001168520011685ERR028695
CS20CS20ERR024077
CS20CS20ERR028685
CS6CS6ERR024078
CS6CS6ERR028686
CS14CS14ERR024079
CS14CS14ERR028687
2004092420040924ERR024089
2004092420040924ERR028697
2006208720062087ERR024091
2006208720062087ERR028699
2007159920071599ERR024092
2007159920071599ERR028700
1994295019942950ERR024093
1994295019942950ERR028701
2001000720010007ERR024094
2001000720010007ERR028702
2006231320062313ERR024095
2006231320062313ERR028703
CS7CS7ERR024096
CS7CS7ERR028704
CS8CS8ERR024097
CS8CS8ERR028705
CS1CS1ERR024098
CS1CS1ERR028706
046Ss046 DNAERR024090
046Ss046 DNAERR028698
ShIB695695.0ERR025682
ShIB696696.0ERR025686
ShIB697697.0ERR025687
ShIB698698.0ERR025688
ShIB713713.0ERR025689
ShIB716716.0ERR025690
ShIB717717.0ERR025691
ShIB739739.0ERR025692
ShIB748748.0ERR025693
ShIB19701970.0ERR025683
ShIB19761976.0ERR025684
ShIB19801980.0ERR025685
ShIB19851985.0ERR025695
ShIB19871987.0ERR025699
ShIB19901990.0ERR025700
ShIB19931993.0ERR025701
ShIB19951995.0ERR025702
ShIB19971997.0ERR025703
ShIB20002000.0ERR025704
ShIB20042004.0ERR025705
ShIB20082008.0ERR025706
ShIB20092009.0ERR025696
ShIB20122012.0ERR025697
ShIB20132013.0ERR025698
ShIB20152015.0ERR025708
ShIB20182018.0ERR025712
ShIB20242024.0ERR025713
ShIB20262026.0ERR025714
ShIB24932493.0ERR025715
ShIB48279482-79ERR025716
ShIB32773277.0ERR025717
ShIB33003300.0ERR025718
ShIB33743374.0ERR025719
ShIB34883488.0ERR025709
ShIB35073507.0ERR025710
ShIB35803580.0ERR025711
ShIB35993599.0ERR025721
PWR105PWR105ERR025725
Sh5417854178.0ERR025726
Sh5417954179.0ERR025727
Sh5418154181.0ERR025728
Sh5418454184.0ERR025729
Sh5418554185.0ERR025730
Sh5419054190.0ERR025731
Sh5421054210.0ERR025732
Sh5421354213.0ERR025722
Sh5421654216.0ERR025723
Sh5422854228.0ERR025724
Sh6586-58ERR025734
Sh2592-59ERR025737
Sh146014-60ERR025738
Sh146114-61ERR025739
Sh176117-61ERR025740
Sh126312-63ERR025741
Sh126512-65ERR025742
Sh116611-66ERR025743
Sh116711-67ERR025744
Sh126712-67ERR025735
Sh156715-67ERR025736
Sh117311-73ERR025746
Sh207320-73ERR025749
Sh2732-73ERR025750
Sh3733-73ERR025751
Sh127412-74ERR025752
Sh257425-74ERR025753
Sh437443-74ERR025754
Sh447444-74ERR025755
Sh4764-76ERR025756
Sh888388-83ERR025747
Sh970044#97 0044ERR025748
Sh988743#98 8743ERR025758
Sh989560#98 9560ERR025761
Sh9810267#9810267ERR025762
Sh998911#99 8911ERR025763
Sh2225#00 2225ERR025764
Sh5827#00 5827ERR025765
Sh30903#03 0903ERR025766
Sh31382#03 1382ERR025767
Sh32222#03 2222ERR025768
Sh36224#03 6224ERR025759
Sh38624#03 8624ERR025760
Sh41191#04 1191ERR024604
Sh55623#05 5623ERR024607
Sh60108#06 0108ERR024608
Sh62542#06 2542ERR024609
Sh65179#06 5179ERR024610
Sh65387#06 5387ERR024611
Sh65623#06 5623ERR024612
Sh66134#06 6134ERR024613
Sh66396#06 6396ERR024614
Sh66470#06 6470ERR024605
Sh74369#07 4369ERR024606
ShIB11.0ERR024616
ShIB22.0ERR024620
ShIB33.0ERR024621
ShIB1010.0ERR024622
ShIB5656.0ERR024623
ShIB6161.0ERR024624
ShIB681681.0ERR024625
ShIB683683.0ERR024626
ShIB687687.0ERR024627
ShIB690690.0ERR024617
ShIB691691.0ERR024618
ShIB694694.0ERR024619
SS7567675676ERR045189
SS8008080080ERR045190
SS8500185001ERR045191
SS8281782817ERR045192
SS8571585715ERR045193
SS8526185261ERR045194
SS9523395233ERR045195
SS9578095780ERR045196
SS9944499444ERR045197
SS9827498274ERR045198
SS106312106312ERR045199
SS105559105559ERR045200
SS109305109305ERR047210
SS109114109114ERR047211
SS117886117886ERR047212
SS117077117077ERR047213
SS127358127358ERR047214
SS129050129050ERR047215
SS127858127858ERR047216
SS128220128220ERR047217
SS128716128716ERR047218
SS129764129764ERR047219
SS130327130327ERR047220
SS131636131636ERR047221
SS132068132068ERR039524
SS132330132330ERR039525
SS133242133242ERR039526
SS133628133628ERR039527
SS134791134791ERR039528
SS136782136782ERR039529

Related links

Data Use Statement

This sequencing centre plans on publishing the completed and annotated sequences in a peer-reviewed journal as soon as possible. Permission of the principal investigator should be obtained before publishing analyses of the sequence/open reading frames/genes on a chromosome or genome scale. See our data sharing policy.

Sequencing enquiries

Please address all sequencing enquiries to: pathinfo@sanger.ac.uk

* quick link - http://q.sanger.ac.uk/gcj77qaa