Dr Susanne U Franssen | Postdoctoral Fellow

Franssen, Susanne U

Publications

  • Uncovering the genetic signature of quantitative trait evolution with replicated time series data.

    Franssen SU, Kofler R and Schlötterer C

    Heredity 2017;118;1;42-51

  • Reconstruction of Haplotype-Blocks Selected during Experimental Evolution.

    Franssen SU, Barton NH and Schlötterer C

    Molecular biology and evolution 2017;34;1;174-184

  • Patterns of linkage disequilibrium and long range hitchhiking in evolving experimental Drosophila melanogaster populations.

    Franssen SU, Nolte V, Tobler R and Schlötterer C

    Molecular biology and evolution 2015;32;2;495-509

  • Combining experimental evolution with next-generation sequencing: a powerful tool to study adaptation from standing genetic variation.

    Schlötterer C, Kofler R, Versace E, Tobler R and Franssen SU

    Heredity 2015;114;5;431-40

  • High rates of phasing errors in highly polymorphic species with low levels of linkage disequilibrium.

    Bukowicki M, Franssen SU and Schlötterer C

    Molecular ecology resources 2016;16;4;874-82

  • Allelic imbalance metre (Allim), a new tool for measuring allele-specific gene expression with RNA-seq data.

    Pandey RV, Franssen SU, Futschik A and Schlötterer C

    Molecular ecology resources 2013;13;4;740-5

  • Transcriptomic resilience to global warming in the seagrass Zostera marina, a marine foundation species.

    Franssen SU, Gu J, Bergmann N, Winters G, Klostermeier UC et al.

    Proceedings of the National Academy of Sciences of the United States of America 2011;108;48;19276-81

  • Reconstruction of Haplotype-Blocks Selected during Experimental Evolution.

    Franssen SU, Barton NH and Schlötterer C

    Molecular biology and evolution 2017;34;1;174-184

  • Uncovering the genetic signature of quantitative trait evolution with replicated time series data.

    Franssen SU, Kofler R and Schlötterer C

    Heredity 2017;118;1;42-51

  • Phylogeographic differentiation versus transcriptomic adaptation to warm temperatures in Zostera marina, a globally important seagrass.

    Jueterbock A, Franssen SU, Bergmann N, Gu J, Coyer JA et al.

    Molecular ecology 2016;25;21;5396-5411

  • High rates of phasing errors in highly polymorphic species with low levels of linkage disequilibrium.

    Bukowicki M, Franssen SU and Schlötterer C

    Molecular ecology resources 2016;16;4;874-82

  • Combining experimental evolution with next-generation sequencing: a powerful tool to study adaptation from standing genetic variation.

    Schlötterer C, Kofler R, Versace E, Tobler R and Franssen SU

    Heredity 2015;114;5;431-40

  • Patterns of linkage disequilibrium and long range hitchhiking in evolving experimental Drosophila melanogaster populations.

    Franssen SU, Nolte V, Tobler R and Schlötterer C

    Molecular biology and evolution 2015;32;2;495-509

  • Genome-wide transcriptomic responses of the seagrasses Zostera marina and Nanozostera noltii under a simulated heatwave confirm functional types.

    Franssen SU, Gu J, Winters G, Huylmans AK, Wienpahl I et al.

    Marine genomics 2014;15;65-73

  • Massive habitat-specific genomic response in D. melanogaster populations during experimental evolution in hot and cold environments.

    Tobler R, Franssen SU, Kofler R, Orozco-Terwengel P, Nolte V et al.

    Molecular biology and evolution 2014;31;2;364-75

  • Allelic imbalance metre (Allim), a new tool for measuring allele-specific gene expression with RNA-seq data.

    Pandey RV, Franssen SU, Futschik A and Schlötterer C

    Molecular ecology resources 2013;13;4;740-5

  • Intra-specific regulatory variation in Drosophila pseudoobscura.

    Suvorov A, Nolte V, Pandey RV, Franssen SU, Futschik A and Schlötterer C

    PloS one 2013;8;12;e83547

  • Transcriptomic resilience to global warming in the seagrass Zostera marina, a marine foundation species.

    Franssen SU, Gu J, Bergmann N, Winters G, Klostermeier UC et al.

    Proceedings of the National Academy of Sciences of the United States of America 2011;108;48;19276-81

  • Comprehensive transcriptome analysis of the highly complex Pisum sativum genome using next generation sequencing.

    Franssen SU, Shrestha RP, Bräutigam A, Bornberg-Bauer E and Weber AP

    BMC genomics 2011;12;227

Franssen, Susanne U
Susanne's Timeline
2016

Started as a Postdoctoral Fellow in the Parasite Genomics Group at the Wellcome Trust Sanger Institute, UK

2012

Started Postdoctoral Research at the Institute of Population Genetics, Vetmeduni Vienna, Austria

PhD in Evolutionary Bioinformatics, Westfaelische Wilhelms-University Muenster, Germany

2008

Diploma in Bioinformatics, Johann Wolfgang Goethe-University Frankfurt, Germany