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Mammalian Phenotype
Chromosome
Marker Symbol

Browsing Data by Marker Symbol: 'S'

Safb

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Safb was found for the following reasons:
synonym - SAFB1
marker_name - scaffold attachment factor B
symbol - Safb
interpro_desc - SAP_dom
marker_symbol_str - Safb
marker_symbol - Safb
interpro - IPR003034||SAP_dom||SAP domain

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
38 9 1 0 view in Ensembl

Safb2

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Safb2 was found for the following reasons:
marker_name - scaffold attachment factor B2
symbol - Safb2
interpro_desc - SAP_dom
marker_symbol_str - Safb2
marker_symbol - Safb2
interpro - IPR003034||SAP_dom||SAP domain

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
39 10 1 0 view in Ensembl

Sag

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Sag was found for the following reasons:
marker_name - S-antigen, retina and pineal gland (arrestin)
symbol - Sag
interpro_desc - Ig_E-set
marker_symbol_str - Sag
marker_symbol - Sag
interpro - IPR014756||Ig_E-set||Immunoglobulin E-set

Gene Details no data available

WTSI Phenotyping

MP Ontology Based Heatmap
Allele Name Colony Prefix Colony Strain adipose tissue behavior/neurological cardiovascular system cellular craniofacial digestive/alimentary embryogenesis endocrine/exocrine gland growth/size hearing/vestibular/ear hematopoietic system homeostasis/metabolism immune system integument limbs/digits/tail liver/biliary system mortality/aging muscle nervous system other pigmentation renal/urinary system reproductive system respiratory system skeleton taste/olfaction tumorigenesis vision/eye
Sagtm1a(EUCOMM)Wtsi MDDR view view view view view view view view view view view view view view view view view view view
Legend: No Raw Data No Significant Annotations Significant Annotation Present Link to a Test Report Page Link to a test report page
About This Heatmap

This heatmap is built up of top-level terms from the MP (Mammalian Phenotype) ontology. We have mapped a majority of the parameters in our tests to appropriate MP terms, so when we perform a given test we can say if it should be annotated with the given MP term (if the phenotype is significant). This is what you see in this heatmap - if a significant result has been annotated to a top-level MP term (or any of its children), the cell will be red, if the result was not significant, the cell will be blue.

Please Note: as mentioned above we do not annotate all of our phenotyping tests to the MP ontology. The tests that are excluded are: 'Adult LacZ Expression', 'Brain/Eye/Skin Histopathology', 'Embryo LacZ Expression', 'Fertility', 'Heart Histology', 'Micronuclei', 'MicroCT & Quantitative Faxitron', 'Plasma Immunoglobulins', 'Prepulse Inhibition', 'Recessive Lethal Study', 'Tail Epidermis Wholemount', 'Tissue Biobank' and 'Viability at Weaning'. You can find our results for these tests in the 'Phenotyping Test Based Heatmap' below.

Phenotyping Test Based Heatmap
Allele Name Colony Prefix Colony Strain Viability at weaning Recessive Lethal Study Fertility Embryo LacZ Expression Adult LacZ Expression General Observations Weight Curves Open Field Modified SHIRPA Grip Strength Hot Plate Dysmorphology Rotarod Non-Invasive Blood Pressure Prepulse Inhibition Indirect Calorimetry Glucose Tolerance (ip) Auditory Brainstem Response Body Composition (DEXA) X-ray Imaging Stress Induced Hyperthermia Eye Morphology Plasma Chemistry Plasma Immunoglobulins Haematology (CBC) Peripheral Blood Lymphocytes Micronuclei Tissue Biobank Heart Weight Heart Histology Tail Epidermis Wholemount Skin Histopathology Brain Histopathology Eye Histopathology MicroCT & Quantitative Faxitron Salmonella Challenge Citrobacter Challenge
Sagtm1a(EUCOMM)Wtsi MDDR view view view view view view view view view view view view view view view view view view view pdf view view
download a spreadsheet containing all WTSI phenotyping data
Legend - hover over each heading to get a more complete description
Test complete and data/resources are available Test is complete and the data are considered interesting Preliminary indication of an interesting phenotype
Test is complete but the data are not considered interesting Test not performed or applicable Test pending
Test abandoned Link to a Test Report Page Link to a test report page Link to a PDF Report Link to a pdf report

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
25 3 0 0 view in Ensembl

Sagg

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Sagg was found for the following reasons:
marker_name - saggy
symbol - Sagg
marker_symbol_str - Sagg
marker_symbol - Sagg

Gene Details

Marker Name(s): saggy
view this gene in MGI
Marker Type: heritable phenotypic marker
Synonyms:
Location: Chr1:40262417-45874398
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1861992 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 103917 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

Sall1

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Sall1 was found for the following reasons:
marker_name - sal-like 1 (Drosophila)
symbol - Sall1
marker_symbol_str - Sall1
marker_symbol - Sall1

Gene Details no data available

WTSI Phenotyping no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
47 9 4 0 view in Ensembl

Sall2

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Sall2 was found for the following reasons:
marker_name - sal-like 2 (Drosophila)
symbol - Sall2
marker_symbol_str - Sall2
marker_symbol - Sall2

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
28 5 0 0 view in Ensembl

Sall3

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Sall3 was found for the following reasons:
synonym - Salt
marker_name - sal-like 3 (Drosophila)
symbol - Sall3
marker_symbol_str - Sall3
marker_symbol - Sall3

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
27 0 0 0 view in Ensembl

Sall4

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Sall4 was found for the following reasons:
marker_name - sal-like 4 (Drosophila)
symbol - Sall4
marker_symbol_str - Sall4
marker_symbol - Sall4

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
23 8 0 0 view in Ensembl

Samd1

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Samd1 was found for the following reasons:
marker_name - sterile alpha motif domain containing 1
symbol - Samd1
interpro_desc - SAM/pointed
marker_symbol_str - Samd1
marker_symbol - Samd1
interpro - IPR013761||SAM/pointed||Sterile alpha motif/pointed domain

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

Samd10

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Samd10 was found for the following reasons:
marker_name - sterile alpha motif domain containing 10
symbol - Samd10
interpro_desc - SAM/pointed
marker_symbol_str - Samd10
marker_symbol - Samd10
interpro - IPR013761||SAM/pointed||Sterile alpha motif/pointed domain

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
15 9 0 0 view in Ensembl