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Mammalian Phenotype
Chromosome
Marker Symbol

Browsing Data by Marker Symbol: 'P'

Pabpn1

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Pabpn1 was found for the following reasons:
synonym - poly(A) binding protein II
marker_name - poly(A) binding protein, nuclear 1
symbol - Pabpn1
targeting_vector - PG00166_Z_7_B03
marker_symbol_str - Pabpn1
marker_symbol - Pabpn1
intermediate_vector - PCS00166_A_B03
marker_type - protein coding gene

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
11 5 0 0 view in Ensembl

Pabpn1l

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Pabpn1l was found for the following reasons:
synonym - ePABP2
marker_name - poly(A)binding protein nuclear 1-like
symbol - Pabpn1l
targeting_vector - PG00216_Z_7_B05
marker_symbol_str - Pabpn1l
marker_symbol - Pabpn1l
intermediate_vector - PCS00216_A_G09
mp_ontology - reproductive system phenotype | abnormal reproductive system physiology | abnormal fertility
marker_type - protein coding gene
mp_term - reproductive system phenotype

Gene Details no data available

WTSI Phenotyping

MP Ontology Based Heatmap
Allele Name Colony Prefix Colony Strain adipose tissue behavior/neurological cardiovascular system cellular craniofacial digestive/alimentary embryogenesis endocrine/exocrine gland growth/size hearing/vestibular/ear hematopoietic system homeostasis/metabolism immune system integument limbs/digits/tail liver/biliary system mortality/aging muscle nervous system other pigmentation renal/urinary system reproductive system respiratory system skeleton taste/olfaction tumorigenesis vision/eye
Pabpn1ltm1a(EUCOMM)Wtsi MDVY view view view view view view view view view view view view view view view view view view view
Legend: No Raw Data No Significant Annotations Significant Annotation Present Link to a Test Report Page Link to a test report page
About This Heatmap

This heatmap is built up of top-level terms from the MP (Mammalian Phenotype) ontology. We have mapped a majority of the parameters in our tests to appropriate MP terms, so when we perform a given test we can say if it should be annotated with the given MP term (if the phenotype is significant). This is what you see in this heatmap - if a significant result has been annotated to a top-level MP term (or any of its children), the cell will be red, if the result was not significant, the cell will be blue.

Please Note: as mentioned above we do not annotate all of our phenotyping tests to the MP ontology. The tests that are excluded are: 'Adult LacZ Expression', 'Brain/Eye/Skin Histopathology', 'Embryo LacZ Expression', 'Fertility', 'Heart Histology', 'Micronuclei', 'MicroCT & Quantitative Faxitron', 'Plasma Immunoglobulins', 'Prepulse Inhibition', 'Recessive Lethal Study', 'Tail Epidermis Wholemount', 'Tissue Biobank' and 'Viability at Weaning'. You can find our results for these tests in the 'Phenotyping Test Based Heatmap' below.

Phenotyping Test Based Heatmap
Allele Name Colony Prefix Colony Strain Viability at weaning Recessive Lethal Study Fertility Embryo LacZ Expression Adult LacZ Expression General Observations Weight Curves Open Field Modified SHIRPA Grip Strength Hot Plate Dysmorphology Rotarod Non-Invasive Blood Pressure Prepulse Inhibition Indirect Calorimetry Glucose Tolerance (ip) Auditory Brainstem Response Body Composition (DEXA) X-ray Imaging Stress Induced Hyperthermia Eye Morphology Plasma Chemistry Plasma Immunoglobulins Haematology (CBC) Peripheral Blood Lymphocytes Micronuclei Tissue Biobank Heart Weight Heart Histology Tail Epidermis Wholemount Skin Histopathology Brain Histopathology Eye Histopathology MicroCT & Quantitative Faxitron Salmonella Challenge Citrobacter Challenge
Pabpn1ltm1a(EUCOMM)Wtsi MDVY view view view view view view view view view view view view view view view view view view view
download a spreadsheet containing all WTSI phenotyping data
Legend - hover over each heading to get a more complete description
Test complete and data/resources are available Test is complete and the data are considered interesting Preliminary indication of an interesting phenotype
Test is complete but the data are not considered interesting Test not performed or applicable Test pending
Test abandoned Link to a Test Report Page Link to a test report page Link to a PDF Report Link to a pdf report

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

Pacrg

Pacrg was found for the following reasons:
marker_name - PARK2 co-regulated
symbol - Pacrg
interpro_desc - Parkin_co-regulated_protein
marker_symbol_str - Pacrg
marker_symbol - Pacrg
marker_type - protein coding gene
interpro - IPR019399||Parkin_co-regulated_protein||Parkin co-regulated protein

Gene Details

Marker Name(s): PARK2 co-regulated
view this gene in MGI
Marker Type: protein coding gene
Synonyms: 1700008H23Rik
Location: Chr17:10403012-10840311(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1916560 Ensembl Gene ID: ENSMUSG00000037196 Vega Gene ID: OTTMUSG00000031249
Entrez Gene ID: 69310 CCDS ID:
Interpro Families
Orthologs / Homologs
Species Marker Symbol Entrez Gene ID Ensembl Gene ID
Human PACRG 135138
Rat LOC100912128 100912128

WTSI Phenotyping no data available

Mice no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
75 16 9 0 view in Ensembl

Pacrgl

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Pacrgl was found for the following reasons:
marker_name - PARK2 co-regulated-like
symbol - Pacrgl
interpro_desc - Parkin_co-regulated_protein
marker_symbol_str - Pacrgl
marker_symbol - Pacrgl
intermediate_vector - PCS04022_A_H03
marker_type - protein coding gene
interpro - IPR019399||Parkin_co-regulated_protein||Parkin co-regulated protein

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

Pacs1

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Pacs1 was found for the following reasons:
marker_name - phosphofurin acidic cluster sorting protein 1
symbol - Pacs1
interpro_desc - Phosphofurin_acidic_CS-1
targeting_vector - PG00199_Z_3_F08
marker_symbol_str - Pacs1
marker_symbol - Pacs1
intermediate_vector - PCTS00199_A_F08
marker_type - protein coding gene
interpro - IPR019381||Phosphofurin_acidic_CS-1||Phosphofurin acidic cluster sorting protein 1

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
37 6 8 0 view in Ensembl

Pacs2

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Pacs2 was found for the following reasons:
synonym - Pacs1l
marker_name - phosphofurin acidic cluster sorting protein 2
symbol - Pacs2
interpro_desc - Phosphofurin_acidic_CS-1
targeting_vector - PRPGS00091_B_A05
marker_symbol_str - Pacs2
marker_symbol - Pacs2
intermediate_vector - PCS00091_C_A05
marker_type - protein coding gene
interpro - IPR019381||Phosphofurin_acidic_CS-1||Phosphofurin acidic cluster sorting protein 1

Gene Details no data available

WTSI Phenotyping no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
45 11 3 0 view in Ensembl

Pacsin1

Pacsin1 was found for the following reasons:
marker_name - protein kinase C and casein kinase substrate in neurons 1
symbol - Pacsin1
marker_symbol_str - Pacsin1
marker_symbol - Pacsin1
intermediate_vector - PCS04024_B_D09
marker_type - protein coding gene

Gene Details

Marker Name(s): protein kinase C and casein kinase substrate in neurons 1
view this gene in MGI
Marker Type: protein coding gene
Synonyms: A830061D09Rik, Syndapin I
Location: Chr17:27655509-27711106(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1345181 Ensembl Gene ID: ENSMUSG00000040276 Vega Gene ID: OTTMUSG00000021338
Entrez Gene ID: 23969 CCDS ID:
Interpro Families
Orthologs / Homologs
Species Marker Symbol Entrez Gene ID Ensembl Gene ID
Human PACSIN1 29993
Rat Pacsin1 29704

WTSI Phenotyping no data available

Mice no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
35 9 2 0 view in Ensembl

Pacsin2

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Pacsin2 was found for the following reasons:
marker_name - protein kinase C and casein kinase substrate in neurons 2
symbol - Pacsin2
targeting_vector - PG00244_Z_1_B08
marker_symbol_str - Pacsin2
marker_symbol - Pacsin2
intermediate_vector - PCS00244_A_A07
marker_type - protein coding gene

Gene Details no data available

WTSI Phenotyping no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
34 12 2 0 view in Ensembl

Pacsin3

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Pacsin3 was found for the following reasons:
marker_name - protein kinase C and casein kinase substrate in neurons 3
symbol - Pacsin3
targeting_vector - PRPGS00065_A_F04
marker_symbol_str - Pacsin3
marker_symbol - Pacsin3
intermediate_vector - PCS00065_A_F04
marker_type - protein coding gene

Gene Details no data available

WTSI Phenotyping

MP Ontology Based Heatmap
Allele Name Colony Prefix Colony Strain adipose tissue behavior/neurological cardiovascular system cellular craniofacial digestive/alimentary embryogenesis endocrine/exocrine gland growth/size hearing/vestibular/ear hematopoietic system homeostasis/metabolism immune system integument limbs/digits/tail liver/biliary system mortality/aging muscle nervous system other pigmentation renal/urinary system reproductive system respiratory system skeleton taste/olfaction tumorigenesis vision/eye
Pacsin3tm1a(EUCOMM)Wtsi MDUQ view view view view view view view view view view view view view view view view view view view
Legend: No Raw Data No Significant Annotations Significant Annotation Present Link to a Test Report Page Link to a test report page
About This Heatmap

This heatmap is built up of top-level terms from the MP (Mammalian Phenotype) ontology. We have mapped a majority of the parameters in our tests to appropriate MP terms, so when we perform a given test we can say if it should be annotated with the given MP term (if the phenotype is significant). This is what you see in this heatmap - if a significant result has been annotated to a top-level MP term (or any of its children), the cell will be red, if the result was not significant, the cell will be blue.

Please Note: as mentioned above we do not annotate all of our phenotyping tests to the MP ontology. The tests that are excluded are: 'Adult LacZ Expression', 'Brain/Eye/Skin Histopathology', 'Embryo LacZ Expression', 'Fertility', 'Heart Histology', 'Micronuclei', 'MicroCT & Quantitative Faxitron', 'Plasma Immunoglobulins', 'Prepulse Inhibition', 'Recessive Lethal Study', 'Tail Epidermis Wholemount', 'Tissue Biobank' and 'Viability at Weaning'. You can find our results for these tests in the 'Phenotyping Test Based Heatmap' below.

Phenotyping Test Based Heatmap
Allele Name Colony Prefix Colony Strain Viability at weaning Recessive Lethal Study Fertility Embryo LacZ Expression Adult LacZ Expression General Observations Weight Curves Open Field Modified SHIRPA Grip Strength Hot Plate Dysmorphology Rotarod Non-Invasive Blood Pressure Prepulse Inhibition Indirect Calorimetry Glucose Tolerance (ip) Auditory Brainstem Response Body Composition (DEXA) X-ray Imaging Stress Induced Hyperthermia Eye Morphology Plasma Chemistry Plasma Immunoglobulins Haematology (CBC) Peripheral Blood Lymphocytes Micronuclei Tissue Biobank Heart Weight Heart Histology Tail Epidermis Wholemount Skin Histopathology Brain Histopathology Eye Histopathology MicroCT & Quantitative Faxitron Salmonella Challenge Citrobacter Challenge
Pacsin3tm1a(EUCOMM)Wtsi MDUQ view view view view view view view view view view view view view view view view view view view pdf view view
download a spreadsheet containing all WTSI phenotyping data
Legend - hover over each heading to get a more complete description
Test complete and data/resources are available Test is complete and the data are considered interesting Preliminary indication of an interesting phenotype
Test is complete but the data are not considered interesting Test not performed or applicable Test pending
Test abandoned Link to a Test Report Page Link to a test report page Link to a PDF Report Link to a pdf report

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
23 9 1 0 view in Ensembl

Padi1

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Padi1 was found for the following reasons:
synonym - Pad type 1
marker_name - peptidyl arginine deiminase, type I
symbol - Padi1
interpro_desc - Protein-arginine deiminase (PAD), central domain
targeting_vector - PGRS0001_B_D06
marker_symbol_str - Padi1
marker_symbol - Padi1
intermediate_vector - PCS00016_A_H11
marker_type - protein coding gene
interpro - IPR013733||Prot_Arg_deaminase_cen_dom||Protein-arginine deiminase (PAD), central domain

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
27 8 0 0 view in Ensembl