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Mammalian Phenotype
Chromosome
Marker Symbol

Browsing Data by Marker Symbol: 'A'

Atp8a2

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Atp8a2 was found for the following reasons:
synonym - AI415030
marker_name - ATPase, aminophospholipid transporter-like, class I, type 8A, member 2
symbol - Atp8a2
interpro_desc - ATPase_P-typ_transduc_dom_A
marker_symbol_str - Atp8a2
marker_symbol - Atp8a2
interpro - IPR008250||ATPase_P-typ_transduc_dom_A||P-type ATPase, A domain

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
80 24 17 0 view in Ensembl

Atp8b1

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Atp8b1 was found for the following reasons:
synonym - AI451886
ikmc_project_product_status - EUCOMM Vector Available
marker_name - ATPase, class I, type 8B, member 1
symbol - Atp8b1
interpro_desc - ATPase_P-typ_transduc_dom_A
marker_symbol_str - Atp8b1
escell - EPD0577_5_A11
marker_symbol - Atp8b1
product_status - Vector Available
intermediate_vector - PCS00188_B_A07
allele - tm1a(EUCOMM)Wtsi
interpro - IPR008250||ATPase_P-typ_transduc_dom_A||P-type ATPase, A domain

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
40 3 16 0 view in Ensembl

Atp8b2

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Atp8b2 was found for the following reasons:
ikmc_project_product_status - KOMP-CSD Vector Available
sanger_phenotype - viability_at_weaning
marker_name - ATPase, class I, type 8B, member 2
symbol - Atp8b2
interpro_desc - ATPase_P-typ_transduc_dom_A
phenotype - viability_at_weaning
marker_symbol_str - Atp8b2
escell - EPD0367_6_A09
marker_symbol - Atp8b2
product_status - Vector Available
mp_ontology - mortality/aging | abnormal survival | partial lethality
allele - tm1a(KOMP)Wtsi
mp_term - abnormal homeostasis
interpro - IPR008250||ATPase_P-typ_transduc_dom_A||P-type ATPase, A domain

Gene Details no data available

WTSI Phenotyping

MP Ontology Based Heatmap
Allele Name Colony Prefix Colony Strain adipose tissue behavior/neurological cardiovascular system cellular craniofacial digestive/alimentary embryogenesis endocrine/exocrine gland growth/size hearing/vestibular/ear hematopoietic system homeostasis/metabolism immune system integument limbs/digits/tail liver/biliary system mortality/aging muscle nervous system other pigmentation renal/urinary system reproductive system respiratory system skeleton taste/olfaction tumorigenesis vision/eye
Atp8b2tm1a(KOMP)Wtsi MFFN view view view view view view view view view view view view view view view view view view
Legend: No Raw Data No Significant Annotations Significant Annotation Present Link to a Test Report Page Link to a test report page
About This Heatmap

This heatmap is built up of top-level terms from the MP (Mammalian Phenotype) ontology. We have mapped a majority of the parameters in our tests to appropriate MP terms, so when we perform a given test we can say if it should be annotated with the given MP term (if the phenotype is significant). This is what you see in this heatmap - if a significant result has been annotated to a top-level MP term (or any of its children), the cell will be red, if the result was not significant, the cell will be blue.

Please Note: as mentioned above we do not annotate all of our phenotyping tests to the MP ontology. The tests that are excluded are: 'Adult LacZ Expression', 'Brain/Eye/Skin Histopathology', 'Embryo LacZ Expression', 'Fertility', 'Heart Histology', 'Micronuclei', 'MicroCT & Quantitative Faxitron', 'Plasma Immunoglobulins', 'Prepulse Inhibition', 'Recessive Lethal Study', 'Tail Epidermis Wholemount', 'Tissue Biobank' and 'Viability at Weaning'. You can find our results for these tests in the 'Phenotyping Test Based Heatmap' below.

Phenotyping Test Based Heatmap
Allele Name Colony Prefix Colony Strain Viability at weaning Recessive Lethal Study Fertility Embryo LacZ Expression Adult LacZ Expression General Observations Weight Curves Open Field Modified SHIRPA Grip Strength Hot Plate Dysmorphology Rotarod Non-Invasive Blood Pressure Prepulse Inhibition Indirect Calorimetry Glucose Tolerance (ip) Auditory Brainstem Response Body Composition (DEXA) X-ray Imaging Stress Induced Hyperthermia Eye Morphology Plasma Chemistry Plasma Immunoglobulins Haematology (CBC) Peripheral Blood Lymphocytes Micronuclei Tissue Biobank Heart Weight Heart Histology Tail Epidermis Wholemount Skin Histopathology Brain Histopathology Eye Histopathology MicroCT & Quantitative Faxitron Salmonella Challenge Citrobacter Challenge
Atp8b2tm1a(KOMP)Wtsi MFFN view view view view view view view view view view view view view view view view
download a spreadsheet containing all WTSI phenotyping data
Legend - hover over each heading to get a more complete description
Test complete and data/resources are available Test is complete and the data are considered interesting Preliminary indication of an interesting phenotype
Test is complete but the data are not considered interesting Test not performed or applicable Test pending
Test abandoned Link to a Test Report Page Link to a test report page Link to a PDF Report Link to a pdf report

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
37 8 0 0 view in Ensembl

Atp8b3

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Atp8b3 was found for the following reasons:
ikmc_project_product_status - KOMP-CSD Vector Available
marker_name - ATPase, class I, type 8B, member 3
symbol - Atp8b3
interpro_desc - ATPase_P-typ_transduc_dom_A
marker_symbol_str - Atp8b3
marker_symbol - Atp8b3
product_status - Vector Available
intermediate_vector - PCS00100_A_C12
interpro - IPR008250||ATPase_P-typ_transduc_dom_A||P-type ATPase, A domain

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
26 5 1 0 view in Ensembl

Atp8b4

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Atp8b4 was found for the following reasons:
ikmc_project_product_status - KOMP-CSD Vector Available
marker_name - ATPase, class I, type 8B, member 4
symbol - Atp8b4
interpro_desc - ATPase_P-typ_transduc_dom_A
targeting_vector - PRPGS00067_A_C07
marker_symbol_str - Atp8b4
escell - EPD0670_2_A03
marker_symbol - Atp8b4
product_status - Vector Available
intermediate_vector - PCS00067_A_C07
allele - tm1a(KOMP)Wtsi
interpro - IPR008250||ATPase_P-typ_transduc_dom_A||P-type ATPase, A domain

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
42 4 3 0 view in Ensembl

Atp8b5

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Atp8b5 was found for the following reasons:
synonym - FetA
ikmc_project_product_status - EUCOMM Vector Available
marker_name - ATPase, class I, type 8B, member 5
symbol - Atp8b5
interpro_desc - ATPase_P-typ_transduc_dom_A
targeting_vector - PGR00001_A_1_D11
marker_symbol_str - Atp8b5
marker_symbol - Atp8b5
product_status - Vector Available
intermediate_vector - PCS00017_A_B03
interpro - IPR008250||ATPase_P-typ_transduc_dom_A||P-type ATPase, A domain

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

Atp9a

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Atp9a was found for the following reasons:
ikmc_project_product_status - EUCOMM Vector Available
marker_name - ATPase, class II, type 9A
symbol - Atp9a
interpro_desc - ATPase_P-typ_transduc_dom_A
targeting_vector - PRPGS00080_A_G06
marker_symbol_str - Atp9a
marker_symbol - Atp9a
product_status - Vector Available
intermediate_vector - PCS00080_A_G06
allele - tm1a(EUCOMM)Hmgu
ikmc_project_id - IST12280A5
interpro - IPR008250||ATPase_P-typ_transduc_dom_A||P-type ATPase, A domain

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
33 16 6 0 view in Ensembl

Atp9b

Atp9b was found for the following reasons:
synonym - AA934181
marker_name - ATPase, class II, type 9B
symbol - Atp9b
interpro_desc - ATPase_P-typ_transduc_dom_A
marker_symbol_str - Atp9b
marker_symbol - Atp9b
interpro - IPR008250||ATPase_P-typ_transduc_dom_A||P-type ATPase, A domain

Gene Details

Marker Name(s): ATPase, class II, type 9B
view this gene in MGI
Marker Type: protein coding gene
Synonyms: AA934181, IIb
Location: Chr18:80734143-80934058(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1354757 Ensembl Gene ID: ENSMUSG00000024566 Vega Gene ID:
Entrez Gene ID: 50771 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells

Vectors ES Cells
KOMP-CSD
Vector - Initial Attempt Unsuccessful Projects: 76504, 46402
Vectors ES Cells
KOMP-Regeneron
Design Not Possible Projects: VG15896

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
65 7 8 0 view in Ensembl

Atpaf1

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Atpaf1 was found for the following reasons:
synonym - ATP11
ikmc_project_product_status - KOMP-CSD Vector Available
marker_name - ATP synthase mitochondrial F1 complex assembly factor 1
symbol - Atpaf1
interpro_desc - ATP11
targeting_vector - PRPGS00049_A_C08
marker_symbol_str - Atpaf1
escell - EPD0071_2_A06
marker_symbol - Atpaf1
product_status - Vector Available
intermediate_vector - PCS00049_A_C08
allele - tm1a(KOMP)Wtsi
interpro - IPR010591||ATP11||ATP11

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
25 4 1 0 view in Ensembl

Atpaf2

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Atpaf2 was found for the following reasons:
expression - adult_expression_brown_adipose_tissue
sanger_expression - adult_expression_brown_adipose_tissue
synonym - ATP12
ikmc_project_product_status - KOMP-CSD Vector Available
sanger_phenotype - viability_at_weaning
marker_name - ATP synthase mitochondrial F1 complex assembly factor 2
symbol - Atpaf2
interpro_desc - ATP12_ATPase-F1F0-assembly
phenotype - viability_at_weaning
targeting_vector - PRPGS00020_A_H03
marker_symbol_str - Atpaf2
escell - EPD0026_5_A02
marker_symbol - Atpaf2
ma_term - anatomical structure
product_status - Vector Available
intermediate_vector - PCS00020_A_H03
mp_ontology - skeleton phenotype | abnormal skeleton morphology | abnormal axial skeleton morphology | abnormal
ma_ontology - anatomical structure | postnatal mouse | organ system | nervous system | peripheral nervous system
allele - tm1a(KOMP)Wtsi
mp_term - abnormal axial skeleton morphology
interpro - IPR011419||ATP12_ATPase-F1F0-assembly||ATP12, ATPase F1F0-assembly protein

Gene Details no data available

WTSI Phenotyping

MP Ontology Based Heatmap
Allele Name Colony Prefix Colony Strain adipose tissue behavior/neurological cardiovascular system cellular craniofacial digestive/alimentary embryogenesis endocrine/exocrine gland growth/size hearing/vestibular/ear hematopoietic system homeostasis/metabolism immune system integument limbs/digits/tail liver/biliary system mortality/aging muscle nervous system other pigmentation renal/urinary system reproductive system respiratory system skeleton taste/olfaction tumorigenesis vision/eye
Atpaf2tm1a(KOMP)Wtsi MBDW view view view view view view view view view view view view view view view view view view view view
Legend: No Raw Data No Significant Annotations Significant Annotation Present Link to a Test Report Page Link to a test report page
About This Heatmap

This heatmap is built up of top-level terms from the MP (Mammalian Phenotype) ontology. We have mapped a majority of the parameters in our tests to appropriate MP terms, so when we perform a given test we can say if it should be annotated with the given MP term (if the phenotype is significant). This is what you see in this heatmap - if a significant result has been annotated to a top-level MP term (or any of its children), the cell will be red, if the result was not significant, the cell will be blue.

Please Note: as mentioned above we do not annotate all of our phenotyping tests to the MP ontology. The tests that are excluded are: 'Adult LacZ Expression', 'Brain/Eye/Skin Histopathology', 'Embryo LacZ Expression', 'Fertility', 'Heart Histology', 'Micronuclei', 'MicroCT & Quantitative Faxitron', 'Plasma Immunoglobulins', 'Prepulse Inhibition', 'Recessive Lethal Study', 'Tail Epidermis Wholemount', 'Tissue Biobank' and 'Viability at Weaning'. You can find our results for these tests in the 'Phenotyping Test Based Heatmap' below.

Phenotyping Test Based Heatmap
Allele Name Colony Prefix Colony Strain Viability at weaning Recessive Lethal Study Fertility Embryo LacZ Expression Adult LacZ Expression General Observations Weight Curves Open Field Modified SHIRPA Grip Strength Hot Plate Dysmorphology Rotarod Non-Invasive Blood Pressure Prepulse Inhibition Indirect Calorimetry Glucose Tolerance (ip) Auditory Brainstem Response Body Composition (DEXA) X-ray Imaging Stress Induced Hyperthermia Eye Morphology Plasma Chemistry Plasma Immunoglobulins Haematology (CBC) Peripheral Blood Lymphocytes Micronuclei Tissue Biobank Heart Weight Heart Histology Tail Epidermis Wholemount Skin Histopathology Brain Histopathology Eye Histopathology MicroCT & Quantitative Faxitron Salmonella Challenge Citrobacter Challenge
Atpaf2tm1a(KOMP)Wtsi MBDW view view view view view view view view view view view view view view view view view view view view view view view view view view view pdf view view
download a spreadsheet containing all WTSI phenotyping data
Legend - hover over each heading to get a more complete description
Test complete and data/resources are available Test is complete and the data are considered interesting Preliminary indication of an interesting phenotype
Test is complete but the data are not considered interesting Test not performed or applicable Test pending
Test abandoned Link to a Test Report Page Link to a test report page Link to a PDF Report Link to a pdf report

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
24 7 0 0 view in Ensembl