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Mammalian Phenotype
Chromosome
Marker Symbol

Browsing Data by Chromosome: '6'

Prh1

Prh1 was found for the following reasons:
chromosome - 6

Gene Details

Marker Name(s): proline rich protein HaeIII subfamily 1
view this gene in MGI
Marker Type: protein coding gene
Synonyms: A-type, MP2, Prp
Location: Chr6:132569809-132572941(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:97773 Ensembl Gene ID: ENSMUSG00000059934 Vega Gene ID: OTTMUSG00000039811
Entrez Gene ID: 19131 CCDS ID:

WTSI Phenotyping no data available

Mice

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IKMC Vectors and ES Cells

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DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
27 2 0 0 view in Ensembl

Prickle2

Prickle2 was found for the following reasons:
chromosome - 6

Gene Details

Marker Name(s): prickle homolog 2 (Drosophila)
view this gene in MGI
Marker Type: protein coding gene
Synonyms: 6230400G14Rik, 6720451F06Rik, mpk2
Location: Chr6:92370908-92567366(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1925144 Ensembl Gene ID: ENSMUSG00000030020 Vega Gene ID: OTTMUSG00000022502
Entrez Gene ID: 243548 CCDS ID:
Interpro Families
Orthologs / Homologs
Species Marker Symbol Entrez Gene ID Ensembl Gene ID
Human PRICKLE2 166336
Rat Prickle2 312563

WTSI Phenotyping no data available

Mice

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IKMC Vectors and ES Cells

  • The 'ikmc-idcc_targ_rep' dataset has returned an error for this query.   more information
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DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
54 12 8 0 view in Ensembl

Prmt8

Prmt8 was found for the following reasons:
chromosome - 6
targeting_vector - PG00063_Z_6_B06
escell - N00011P1_C_14T_A6

Gene Details no data available

WTSI Phenotyping

MP Ontology Based Heatmap
Allele Name Colony Prefix Colony Strain adipose tissue behavior/neurological cardiovascular system cellular craniofacial digestive/alimentary embryogenesis endocrine/exocrine gland growth/size hearing/vestibular/ear hematopoietic system homeostasis/metabolism immune system integument limbs/digits/tail liver/biliary system mortality/aging muscle nervous system other pigmentation renal/urinary system reproductive system respiratory system skeleton taste/olfaction tumorigenesis vision/eye
Prmt8tm1a(EUCOMM)Wtsi MBMF view view view view view view view view view view view view view view view view view view view view
Legend: No Raw Data No Significant Annotations Significant Annotation Present Link to a Test Report Page Link to a test report page
About This Heatmap

This heatmap is built up of top-level terms from the MP (Mammalian Phenotype) ontology. We have mapped a majority of the parameters in our tests to appropriate MP terms, so when we perform a given test we can say if it should be annotated with the given MP term (if the phenotype is significant). This is what you see in this heatmap - if a significant result has been annotated to a top-level MP term (or any of its children), the cell will be red, if the result was not significant, the cell will be blue.

Please Note: as mentioned above we do not annotate all of our phenotyping tests to the MP ontology. The tests that are excluded are: 'Adult LacZ Expression', 'Brain/Eye/Skin Histopathology', 'Embryo LacZ Expression', 'Fertility', 'Heart Histology', 'Micronuclei', 'MicroCT & Quantitative Faxitron', 'Plasma Immunoglobulins', 'Prepulse Inhibition', 'Recessive Lethal Study', 'Tail Epidermis Wholemount', 'Tissue Biobank' and 'Viability at Weaning'. You can find our results for these tests in the 'Phenotyping Test Based Heatmap' below.

Phenotyping Test Based Heatmap
Allele Name Colony Prefix Colony Strain Viability at weaning Recessive Lethal Study Fertility Embryo LacZ Expression Adult LacZ Expression General Observations Weight Curves Open Field Modified SHIRPA Grip Strength Hot Plate Dysmorphology Rotarod Non-Invasive Blood Pressure Prepulse Inhibition Indirect Calorimetry Glucose Tolerance (ip) Auditory Brainstem Response Body Composition (DEXA) X-ray Imaging Stress Induced Hyperthermia Eye Morphology Plasma Chemistry Plasma Immunoglobulins Haematology (CBC) Peripheral Blood Lymphocytes Micronuclei Tissue Biobank Heart Weight Heart Histology Tail Epidermis Wholemount Skin Histopathology Brain Histopathology Eye Histopathology MicroCT & Quantitative Faxitron Salmonella Challenge Citrobacter Challenge
Prmt8tm1a(EUCOMM)Wtsi MBMF view view view view view view view view view view view view view view view view view view view view view view view view view view view view
download a spreadsheet containing all WTSI phenotyping data
Legend - hover over each heading to get a more complete description
Test complete and data/resources are available Test is complete and the data are considered interesting Preliminary indication of an interesting phenotype
Test is complete but the data are not considered interesting Test not performed or applicable Test pending
Test abandoned Link to a Test Report Page Link to a test report page Link to a PDF Report Link to a pdf report

Mice

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IKMC Vectors and ES Cells

  • The 'ikmc-idcc_targ_rep' dataset has returned an error for this query.   more information
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DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
29 15 3 1 view in Ensembl

Prok2

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Prok2 was found for the following reasons:
chromosome - 6
escell - HEPD0743_6_A12

Gene Details no data available

WTSI Phenotyping no data available

Mice

  • The 'ikmc-imits' dataset has returned an error for this query.   more information
    MartSearch::DataSourceError
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    Please try resubmitting your search to include this dataset.
          Biomart::BiomartError: Biomart error.
        

IKMC Vectors and ES Cells

  • The 'ikmc-idcc_targ_rep' dataset has returned an error for this query.   more information
    MartSearch::DataSourceError
    This is an important dataset for this view. The data in this view may not be complete without this information.
    Please try resubmitting your search to include this dataset.
          Biomart::BiomartError: Biomart error.
        

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
25 4 0 1 view in Ensembl

Prokr1

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Prokr1 was found for the following reasons:
chromosome - 6
escell - HEPD0753_6_E02

Gene Details no data available

WTSI Phenotyping no data available

Mice

  • The 'ikmc-imits' dataset has returned an error for this query.   more information
    MartSearch::DataSourceError
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    Please try resubmitting your search to include this dataset.
          Biomart::BiomartError: Biomart error.
        

IKMC Vectors and ES Cells

  • The 'ikmc-idcc_targ_rep' dataset has returned an error for this query.   more information
    MartSearch::DataSourceError
    This is an important dataset for this view. The data in this view may not be complete without this information.
    Please try resubmitting your search to include this dataset.
          Biomart::BiomartError: Biomart error.
        

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
27 3 0 2 view in Ensembl

Prp2

Prp2 was found for the following reasons:
chromosome - 6
escell - DEPD00573_6_D09

Gene Details

Marker Name(s): proline rich protein 2
view this gene in MGI
Marker Type: protein coding gene
Synonyms: MP14
Location: Chr6:132595913-132601236(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1932491 Ensembl Gene ID: ENSMUSG00000058295 Vega Gene ID: OTTMUSG00000034591
Entrez Gene ID: 83380 CCDS ID:

WTSI Phenotyping no data available

Mice

  • The 'ikmc-imits' dataset has returned an error for this query.   more information
    MartSearch::DataSourceError
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          Biomart::BiomartError: Biomart error.
        

IKMC Vectors and ES Cells

  • The 'ikmc-idcc_targ_rep' dataset has returned an error for this query.   more information
    MartSearch::DataSourceError
    This is an important dataset for this view. The data in this view may not be complete without this information.
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DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
25 3 0 0 view in Ensembl

Prpmp5

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Prpmp5 was found for the following reasons:
chromosome - 6

Gene Details

Marker Name(s): proline-rich protein MP5
view this gene in MGI
Marker Type: protein coding gene
Synonyms: BC061494, MP5
Location: Chr6:132311590-132314757(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1927478 Ensembl Gene ID: ENSMUSG00000052262 Vega Gene ID: OTTMUSG00000034590
Entrez Gene ID: 381832 CCDS ID:

WTSI Phenotyping no data available

Mice

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IKMC Vectors and ES Cells

  • The 'ikmc-idcc_targ_rep' dataset has returned an error for this query.   more information
    MartSearch::DataSourceError
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DNA Clone Resources no data available

Prr15

Prr15 was found for the following reasons:
chromosome - 6
targeting_vector - HTGR06004_A_6_H10

Gene Details

Marker Name(s): proline rich 15
view this gene in MGI
Marker Type: protein coding gene
Synonyms: E130201N16Rik, G90
Location: Chr6:54327012-54330200(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1925254 Ensembl Gene ID: ENSMUSG00000045725 Vega Gene ID:
Entrez Gene ID: 78004 CCDS ID:
Orthologs / Homologs
Species Marker Symbol Entrez Gene ID Ensembl Gene ID
Human PRR15 222171
Rat Prr15 312358

WTSI Phenotyping no data available

Mice

  • The 'ikmc-imits' dataset has returned an error for this query.   more information
    MartSearch::DataSourceError
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IKMC Vectors and ES Cells

  • The 'ikmc-idcc_targ_rep' dataset has returned an error for this query.   more information
    MartSearch::DataSourceError
    This is an important dataset for this view. The data in this view may not be complete without this information.
    Please try resubmitting your search to include this dataset.
          Biomart::BiomartError: Biomart error.
        

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
37 5 0 0 view in Ensembl

Prrt3

Prrt3 was found for the following reasons:
chromosome - 6
escell - 11108A-A6

Gene Details

Marker Name(s): proline-rich transmembrane protein 3
view this gene in MGI
Marker Type: protein coding gene
Synonyms: B230206N24Rik
Location: Chr6:113494095-113501818(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:2444810 Ensembl Gene ID: ENSMUSG00000045009 Vega Gene ID:
Entrez Gene ID: 210673 CCDS ID:
Orthologs / Homologs
Species Marker Symbol Entrez Gene ID Ensembl Gene ID
Human PRRT3 285368
Rat Prrt3 502873

WTSI Phenotyping no data available

Mice

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    MartSearch::DataSourceError
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IKMC Vectors and ES Cells

  • The 'ikmc-idcc_targ_rep' dataset has returned an error for this query.   more information
    MartSearch::DataSourceError
    This is an important dataset for this view. The data in this view may not be complete without this information.
    Please try resubmitting your search to include this dataset.
          Biomart::BiomartError: Biomart error.
        

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
26 6 0 0 view in Ensembl

Prrt4

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Prrt4 was found for the following reasons:
chromosome - 6

Gene Details

Marker Name(s): proline-rich transmembrane protein 4
view this gene in MGI
Marker Type: protein coding gene
Synonyms: AW455481, D330027H18Rik
Location: Chr6:29169232-29179584(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:2141677 Ensembl Gene ID: ENSMUSG00000079654 Vega Gene ID: OTTMUSG00000034247
Entrez Gene ID: 101359 CCDS ID:
Orthologs / Homologs
Species Marker Symbol Entrez Gene ID Ensembl Gene ID
Human PRRT4 401399
Rat Prrt4 500059

WTSI Phenotyping no data available

Mice

  • The 'ikmc-imits' dataset has returned an error for this query.   more information
    MartSearch::DataSourceError
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IKMC Vectors and ES Cells

  • The 'ikmc-idcc_targ_rep' dataset has returned an error for this query.   more information
    MartSearch::DataSourceError
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DNA Clone Resources no data available