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Genomics of Drug Sensitivity in Cancer

Summary Information

Targeted molecular therapies that disrupt specific intracellular signaling pathways are increasingly used for the treatment of cancer. The rationale for this approach is based on our increasing understanding of the genes that are causally implicated in cancer and the clinical observation that the genetic features of a cancer can be predictive of patient response to targeted therapies. The goal of our project is to discover new cancer biomarkers that define subsets of drug-sensitive patients. Towards this aim we are screening a range of anti-cancer therapeutics against a large number of genetically characterized human cancer cell lines and correlating drug sensitivity with extensive genetic data. This information can be used to inform the optimal clinical application of cancer drugs as well as the design of clinical trials of investigational compounds being developed for the clinic [more]


Resources
Analysis of cell line drug sensitivity data

Drug-specific analyses


Global overview of analyses


Download analysis files


Resources and Links

Center for Molecular Therapeutics - Our collaborators at Massachusetts General Hospital Cancer Center, USA


STR profiles - for the 9 loci used by the largest cell line repositories to confirm cell line identity


Tissue classification of cell lines - A breakdown of tissue types represented in the cell line repository.


Photos of the Sanger Institute Lab


Team members at the Wellcome Trust Sanger Institute and Massachusetts General Hospital Cancer Center.


Screening methodologies – a description of our experimental design and statistical analyses.


Relevant publications


 

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News

Upcoming screening compounds: Metformin, AICAR, Cisplatin and Axitinib


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Last Modified Wed Jun 1 09:29:41 2011

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