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CGP Resequencing Studies

Summary

This web page provides links to targeted and Whole Genome Screens produced by the Cancer Genome Project . The data is grouped in studies; a set of samples resequenced for a set of genes or a Whole Genome. The samples are often from the same tumour type, eg breast cancers, and include primary tumours and cancer cell lines. The genes are grouped by biological processes or structural similarity.

The results from each study are also entered into COSMIC.

To allow greater utility and ease of configuration, somatic mutation data are now being released on a bimonthly basis. All fully verified and curated somatic mutations accrued in the preceding two months will be released with the data appearing in the appropraite studies pages within the COSMIC CGP resquencing pages.

Sequence Data Entry Points

Detailed Search
  • Browse by Gene
  • Browse by Tissue
Quick Search
  • Browse by Tissue
  • Browse by Sample
Additional Info
  • COSMIC
  • Cancer Cell Line Project
  • CGP Trace and Genotype Archive
  • Biomart
Study


Whole Genome Analysis
  • Breast Tumour Rearrangement Screen


  • Whole Genome screen of Melanoma Cell Line (COLO-829)


  • Whole Genome screen of Lung Cell Line (NCI-H209)


  • Pilot Rearrangement Screen


  • Renal Exome Screen


  • Pancreatic Rearrangement Screen
Capillary Screen Data
  • Protein Kinase Gene Analysis


  • Pilot Matched Pair Cell Lines


  • Renal Matched Pair Tumour Set


  • Adenoid Cystic Carcinoma Screen


  • View all Capillary Screen Studies

Sequence Statistics

Data are a reflection of ongoing work and should be considered accordingly. The resource is updated every other month. The present somatic mutation count is:


Experiments 124646
Tumours 599
Mutations 41933
Genes 15360

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Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SA, UK  Tel:+44 (0)1223 834244

Last Modified Wed Jun 1 09:27:12 2011

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