Package uk.ac.sanger.cgp.standalonecsa.jabawat

The core of the alignment system used in Standalone AutoCSA.

See:
          Description

Class Summary
Jabawat Originally part of CGP's internal geneutil package JaBaWAT basically stands for Java Basic Word Alignment Tool.
JabawatResults When an object of this is created it is used to hold the results and other info from the jabawat program.
 

Package uk.ac.sanger.cgp.standalonecsa.jabawat Description

The core of the alignment system used in Standalone AutoCSA.