uk.ac.sanger.cgp.standalonecsa.interfaces
Interface FlaggingService

All Known Implementing Classes:
FlaggingServiceImpl

public interface FlaggingService

This interface is intended to handle all flagging related calls.

Author:
Original: kr2, $Author: kr2 $

Method Summary
 void flagTraceGroup(TraceGroupBean traceGroup)
          Performs variant flagging.
 

Method Detail

flagTraceGroup

void flagTraceGroup(TraceGroupBean traceGroup)
Performs variant flagging. This method does many complex things but the only real change to the input object is that if a variant is flagged as good the Mutation.setFlaggedGood() (autocsa.beans) should be set to true.

Parameters:
traceGroup - the TraceGroupBean to be flagged