uk.ac.sanger.cgp.standalonecsa.control
Class StandaloneCsa

java.lang.Object
  uk.ac.sanger.cgp.standalonecsa.control.StandaloneCsa

public class StandaloneCsa
extends java.lang.Object

This is the main driving class for the analysis system and handles the linking together of all components.

Author:

Original: kr2, $Author: kr2 $

Constructor Summary

StandaloneCsa()
Creates a new instance of StandaloneCsa

Method Summary

static void

main(java.lang.String[] args) The main method for running StandaloneCSA.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

StandaloneCsa

public StandaloneCsa()

Creates a new instance of StandaloneCsa

Method Detail

main

public static void main(java.lang.String[] args)

The main method for running StandaloneCSA. In short this mothod decides if the user needs to run the GUI setupCsa tool based on either the input parameters or the presence of the needed properties files.

If the system is ready to run full analysis is performed.

Parameters:

args - optional, when specified requires '[guiSetup|forceSetup] installLocation'