Cancer genes sorted by chromosome.

This table is a summary of the working cancer gene list. The full version of this table can be downloaded here .This is part of Table 1 in Futreal et al.

Symbol	Name	Entrez GeneID	Chr	Chr Band	Mutation Type	Synonyms
ABL1	v-abl Abelson murine leukemia viral oncogene homolog 1	25	9	9q34.1	T, Mis	25, ABL, ABL1, ENSG00000097007, JTK7, P00519, bcr/abl, c-ABL, p150, v-abl
ABL2	v-abl Abelson murine leukemia viral oncogene homolog 2	27	1	1q24-q25	T	27, ABL2, ABLL, ARG, ENSG00000143322, P42684, RP11-177A2_3
ACSL3	acyl-CoA synthetase long-chain family member 3	2181	2	2q36	T	2181, ACS3, ACSL3, ASPM, CCDS2455.1, ENSG00000123983, FACL3, O95573, PRO2194, Q6PIM8
AF15Q14	AF15q14 protein	57082	15	15q14	T	57082, AF15Q14, CASC5, D40, ENSG00000137812, Q8NG31
AF1Q	ALL1-fused gene from chromosome 1q	10962	1	1q21	T	10962, AF1Q, CCDS982.1, ENSG00000213190, MLLT11, Q13015, Q6FGF7
AF3p21	SH3 protein interacting with Nck, 90 kDa (ALL1 fused gene from 3p21)	51517	3	3p21	T	51517, AF3P21, AF3p21, CCDS2776.1, ENSG00000213672, NCKIPSD, ORF1, Q6GU34, Q8TC10, Q9NZQ3, SPIN90, WASLBP, WISH
AF5q31	ALL1 fused gene from 5q31	27125	5	5q31	T	27125, AF5Q31, AF5q31, AFF4, CCDS4164.1, ENSG00000072364, MCEF, Q9UHB7
AKAP9	A kinase (PRKA) anchor protein (yotiao) 9	10142	7	7q21-q22	T	10142, AKAP350, AKAP450, AKAP9, AKAP9_ENST00000356239, AKAP9_NM_005751, B3KQF9, CCDS5622, CG-NAP, ENSG00000127914, HYPERION, KIAA0803, MU-RMS-40_16A, PRKA9, Q5GIA7, Q8IW64, Q99996, YOTIAO
AKT1	v-akt murine thymoma viral oncogene homolog 1	207	14	14q32.32	Mis	207, AKT, AKT1, AKT1_NEW, B0LPE5, B2RAM5, B3KVH4, B3KXD7, B7Z5R1, CCDS9994, ENSG00000142208, MGC99656, P31749, PKB, PKB-ALPHA, PRKBA, Q9BV07, RAC, RAC-ALPHA
AKT2	v-akt murine thymoma viral oncogene homolog 2	208	19	19q13.1-q13.2	A	208, AKT2, CCDS12552.1, ENSG00000105221, P31751, PKBBETA, PRKBB, RAC-BETA
ALDH2	aldehyde dehydrogenase 2 family (mitochondrial)	217	12	12q24.2	T	217, ALDH-E2, ALDH2, ALDHI, ALDM, CCDS9155.1, ENSG00000111275, MGC1806, P05091, Q53FB6, Q9UN17
ALK	anaplastic lymphoma kinase (Ki-1)	238	2	2p23	T, Mis, A	238, ALK, CD246, ENSG00000171094, Q9UM73, TFG/ALK
ALO17	KIAA1618 protein	57714	17	17q25.3	T	57674, ALO17, C17orf27, CCDS32761.1, ENSG00000173821, KIAA1554, Q63HN8, Q6ZSK6, RNF213
APC	adenomatous polyposis of the colon gene	324	5	5q21	D, Mis, N, F, S	324, APC, CCDS4107.1, DP2, DP2_5, DP3, ENSG00000134982, FAP, FPC, GS, P25054
ARHGEF12	RHO guanine nucleotide exchange factor (GEF) 12 (LARG)	23365	11	11q23.3	T	23365, ARHGEF12, DKFZp686O2372, ENSG00000196914, KIAA0382, LARG, PRO2792, Q6P526, Q9NZN5
ARHH	RAS homolog gene family, member H (TTF)	399	4	4p13	T	399, ARHH, CCDS3458.1, ENSG00000168421, RHOH, RhoH, TTF
ARID1A	AT rich interactive domain 1A (SWI-like)	8289	1	1p35.3	Mis, N, F, S, D	8289, ARID1A, B120, BAF250, BAF250a, BM029, C1orf4, ENSG00000117713, P270, RP1-50O24_1, SMARCF1
ARID2	AT rich interactive domain 2	196528	12	12q12	N, S, F	196528, ARID2, BAF200, CCDS31783.1, DKFZp686G052, DKFZp779P0222, ENSG00000189079, FLJ30619, KIAA1557, Q15KG9, Q4G0S8, Q68CP9, Q8NBP1, Q8WV72, Q96DQ8, Q96SQ4, p200
ARNT	aryl hydrocarbon receptor nuclear translocator	405	1	1q21	T	405, ARNT, CCDS970.1, ENSG00000143437, HIF-1beta, HIF1B, HIF1BETA, O43392, P27540, Q53F30, Q59ED4, Q5QP39, Q6P9C1, TANGO
ASPSCR1	alveolar soft part sarcoma chromosome region, candidate 1	79058	17	17q25	T	79058, ASPSCR1, CCDS11796.1, ENSG00000169696, Q9BZE9
ASXL1	additional sex combs like 1	171023	20	20q11.1	F, N, Mis	171023, ASXL1, CCDS13201.1, ENSG00000171456, KIAA0978, MGC117280, MGC71111, Q498B9, Q6P1M8, Q8IXJ9
ATF1	activating transcription factor 1	466	12	12q13	T	466, ATF1, CCDS8803.1, ENSG00000123268, P18846, TREB36
ATIC	5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase	471	2	2q35	T	471, AICARFT, ATIC, CCDS2398.1, ENSG00000138363, IMPCHASE, P31939, PURH, Q53S28
ATM	ataxia telangiectasia mutated	472	11	11q22.3	D, Mis, N, F, S	472, AT1, ATA, ATC, ATD, ATDC, ATE, ATM, DKFZp781A0353, ENSG00000149311, MGC74674, Q13315, TEL1, TELO1
ATRX	alpha thalassemia/mental retardation syndrome X-linked	546	X	Xq21.1	Mis, F, N	546, A4LAA3, A8MTN6, ATR2, ATRX, ATRX_ENST00000373344, B4DHH8, B4DLE1, B4DLW1, B7Z1D8, CCDS14434, D3DTE2, MGC2094, MRXHF1, P46100, Q86U63, RAD54, RAD54L, SFM1, SHS, XH2, XNP, ZNF-HX
BAP1	BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase)	8314	3	3p21.31-p21.2	N, Mis, F, S, O	8314, BAP1, CCDS2853.1, DKFZp686N04275, ENSG00000163930, FLJ35406, FLJ37180, HUCEP-13, KIAA0272, Q92560, hucep-6
BCL10	B-cell CLL/lymphoma 10	8915	1	1p22	T	8915, BCL10, CARMEN, CCDS704.1, CIPER, CLAP, ENSG00000142867, c-E10, mE10
BCL11A	B-cell CLL/lymphoma 11A	53335	2	2p13	T	53335, BCL11A, BCL11A-L, BCL11A-S, BCL11A-XL, CCDS1862.1, CTIP1, ENSG00000119866, EVI9, FLJ10173, FLJ34997, KIAA1809, Q53TE8, Q53TS1, Q9H165
BCL11B	B-cell CLL/lymphoma 11B (CTIP2)	64919	14	14q32.1	T	64919, BCL11B, CCDS9950.1, CTIP-2, CTIP2, ENSG00000127152, Q9C0K0, RIT1, hRIT1-alpha
BCL2	B-cell CLL/lymphoma 2	596	18	18q21.3	T	596, BCL2, Bcl-2, CCDS11981.1, ENSG00000171791
BCL3	B-cell CLL/lymphoma 3	602	19	19q13	T	602, BCL3, BCL4, CCDS12642.1, D19S37, ENSG00000069399, P20749
BCL5	B-cell CLL/lymphoma 5	603	17	17q22	T
BCL6	B-cell CLL/lymphoma 6	604	3	3q27	T, Mis	604, BCL5, BCL6, BCL6A, CCDS3289.1, ENSG00000113916, LAZ3, P41182, ZBTB27, ZNF51
BCL7A	B-cell CLL/lymphoma 7A	605	12	12q24.1	T	605, BCL7, BCL7A, ENSG00000110987
BCL9	B-cell CLL/lymphoma 9	607	1	1q21	T	607, BCL9, ENSG00000116128, LGS, MGC131591
BCOR	BCL6 corepressor	54880	X	Xp11.4	F, N, S, T	54880, ANOP2, BCOR, CCDS14250.1, ENSG00000183337, FLJ20285, FLJ38041, KIAA1575, MAA2, MCOPS2, MGC131961, MGC71031
BCR	breakpoint cluster region	613	22	22q11.21	T	613, ALL, BCR, BCR1, CCDS13806.1, CML, D22S11, D22S662, ENSG00000186716, FLJ16453, P11274, PHL
BHD	folliculin, Birt-Hogg-Dube syndrome	201163	17	17p11.2	Mis. N, F	201163, BHD, ENSG00000154803, FLCL, FLCN, MGC17998, MGC23445
BIRC3	baculoviral IAP repeat-containing 3	330	11	11q22-q23	T	330, AIP1, API2, BIRC3, CCDS8315.1, CIAP2, ENSG00000023445, HAIP1, HIAP1, MALT2, MIHC, Q13489, RNF49, cIAP2, hiap-1
BLM	Bloom Syndrome	641	15	15q26.1	Mis, N, F	641, BLM, BS, CCDS10363.1, ENSG00000197299, MGC126616, MGC131618, MGC131620, RECQ2, RECQL2, RECQL3
BMPR1A	bone morphogenetic protein receptor, type IA	657	10	10q22.3	Mis, N, F	657, ACVRLK3, ALK3, BMPR1A, CCDS7378.1, CD292, ENSG00000107779, P36894
BRAF	v-raf murine sarcoma viral oncogene homolog B1	673	7	7q34	Mis, T, O	673, B-raf 1, B-raf1, BRAF, BRAF1, CCDS5863.1, ENSG00000157764, MGC126806, MGC138284, P15056, RAFB1
BRCA1	familial breast/ovarian cancer gene 1	672	17	17q21	D, Mis, N, F, S	672, BRCA1, BRCAI, BRCC1, ENSG00000012048, IRIS, PSCP, RNF53
BRCA2	familial breast/ovarian cancer gene 2	675	13	13q12	D, Mis, N, F, S	675, BRCA2, BRCC2, ENSG00000139618, FACD, FAD, FAD1, FANCB, FANCD, FANCD1, RP11-298P3_4
BRD3	bromodomain containing 3	8019	9	9q34	T	8019, BRD3, ENSG00000169925, KIAA0043, ORFX, Q15059, RING3L
BRD4	bromodomain containing 4	23476	19	19p13.1	T	23476, BRD4, BRD4_ENST00000263377, CAP, CCDS12328, ENSG00000141867, HUNK1, HUNKI, MCAP, O60885, Q05BM2, Q5BJ26, Q6NXE4, Q6PIS5, Q96HN0
BRIP1	BRCA1 interacting protein C-terminal helicase 1	83990	17	17q22	F, N, Mis	83990, BACH1, BRIP1, CCDS11631.1, ENSG00000136492, FANCJ, FLJ90232, MGC126521, MGC126523, OF, Q9BX63
BTG1	B-cell translocation gene 1, anti-proliferative	694	12	12q22	T	694, BTG1, CCDS9043.1, ENSG00000133639, P62324, Q6IBC8
BUB1B	BUB1 budding uninhibited by benzimidazoles 1 homolog beta (yeast)	701	15	15q15	Mis, N, F, S	701, BUB1B, BUB1beta, BUBR1, Bub1A, CCDS10053.1, ENSG00000156970, MAD3L, O60566, SSK1, hBUBR1
C12orf9	chromosome 12 open reading frame 9	93669	12	12q14.3	T
C15orf21	chromosome 15 open reading frame 21	283651	15	15q21.1	T
C15orf55	chromosome 15 open reading frame 55	256646	15	15q14	T	256646, C15orf55, CCDS32190.1, ENSG00000184507, NUT, Q86Y26, Q86YS8, Q9NTB3
C16orf75	chromosome 16 open reading frame 75	116028	16	16p13.13	T	116028, C16orf75, CCDS10548.1, ENSG00000175643, MGC24665, Q96E14, RMI2
C2orf44	chromosome 2 open reading frame 44	80304	2	2p23.3	T	80304, C2orf44, CCDS1705.1, ENSG00000163026, FLJ21945, PP384, Q8IYK0, Q9H6R7, Q9HBP5
CAMTA1	calmodulin binding transcription activator 1	611501	1	1p36.31-p36.23	T	23261, CAMTA1, CCDS30576.1, ENSG00000171735, KIAA0833, Q7Z7P1, Q96S92, Q9Y6Y1
CANT1	calcium activated nucleotidase 1	124583	17	17q25	T	124583, CANT1, CCDS11760.1, ENSG00000171302, Q8WVQ1, SCAN-1, SHAPY
CARD11	caspase recruitment domain family, member 11	84433	7	7p22	Mis	84433, BIMP3, CARD11, CARMA1, CCDS5336.1, ENSG00000198286, MGC133069, Q9BXL7
CARS	cysteinyl-tRNA synthetase	833	11	11p15.5	T	833, CARS, CCDS7742.1, ENSG00000110619, P49589, Q53HG6
CBFA2T1	core-binding factor, runt domain, alpha subunit 2;translocated to, 1 (ETO)	862	8	8q22	T	862, CBFA2T1, CCDS6257.1, ENSG00000079102, Q7Z4J5, Q9HBV9, RUNX1T1
CBFA2T3	core-binding factor, runt domain, alpha subunit 2; translocated to, 3 (MTG-16)	863	16	16q24	T	863, CBFA2T3, CCDS10972.1, ENSG00000129993, ETO2, MTG16, MTGR2, O60615, O60616, O60617, O75081, Q0P5Z6, ZMYND4
CBFB	core-binding factor, beta subunit	865	16	16q22	T	865, CBFB, CCDS10827.1, ENSG00000067955, PEBP2B, Q13951, Q9HCT2
CBL	Cas-Br-M (murine) ecotropic retroviral transforming	867	11	11q23.3	T, Mis S, O	867, C-CBL, CBL, CBL2, CCDS8418.1, ENSG00000110395, RNF55
CBLB	Cas-Br-M (murine) ecotropic retroviral transforming sequence b	868	3	3q13.11	Mis S	868, CBLB, CCDS2948.1, DKFZp686J10223, DKFZp779A0729, DKFZp779F1443, ENSG00000114423, FLJ36865, FLJ41152, Nbla00127, RNF56
CBLC	Cas-Br-M (murine) ecotropic retroviral transforming sequence c	23624	19	19q13.2	M	23624, CBL-3, CBL-SL, CBLC, CCDS12643.1, ENSG00000142273, Q9ULV8, RNF57
CCDC6	coiled-coil domain containing 6	8030	10	10q21	T	8030, CCDC6, CCDS7257.1, D10S170, ENSG00000108091, H4, PTC, Q05CP8, Q16204, Q6GSG7, TPC, TST1
CCNB1IP1	cyclin B1 interacting protein 1, E3 ubiquitin protein ligase	57820	14	14q11.2	T	57820, C14orf18, CCDS9547.1, CCNB1IP1, ENSG00000100814, HEI10, Q9NPC3
CCND1	cyclin D1	595	11	11q13	T	595, BCL1, CCDS8191.1, CCND1, D11S287E, ENSG00000110092, PRAD1, U21B31
CCND2	cyclin D2	894	12	12p13	T	894, CCDS8524.1, CCND2, ENSG00000118971, KIAK0002, MGC102758, P30279, Q53ER2
CCND3	cyclin D3	896	6	6p21	T	896, CCDS4863.1, CCND3, ENSG00000112576, P30281, Q6FG62
CCNE1	cyclin E1	898	19	19q12	A	898, CCDS12419.1, CCNE, CCNE1, ENSG00000105173, P24864
CD273	programmed cell death 1 ligand 2	80380	9	9p24.2	T	80380, B7DC, Btdc, CCDS6465.1, CD273, ENSG00000197646, MGC142238, MGC142240, PD-L2, PDCD1L2, PDCD1LG2, PDL2, Q2LC89, Q9BQ51, bA574F11_2
CD274	CD274 molecule	29126	9	9p24	T	29126, B7-H, B7H1, CCDS6464.1, CD274, ENSG00000120217, MGC142294, MGC142296, PD-L1, PDCD1L1, PDCD1LG1, PDL1, Q0GN75, Q9NZQ7
CD74	CD74 molecule, major histocompatibility complex, class II invariant chain	972	5	5q32	T	972, CCDS34276.1, CD74, DHLAG, ENSG00000019582, HLADG, Ia-GAMMA, O19685, Q8SNA0, Q9TNQ4, Q9TNQ6, protein 41
CD79A	CD79a molecule, immunoglobulin-associated alpha	973	19	19q13.2	O, S	973, CCDS12589.1, CD79A, ENSG00000105369, IGA, MB-1, P11912, Q53FB8
CD79B	CD79b molecule, immunoglobulin-associated beta	974	17	17q23	Mis, O	974, B29, CCDS11655.1, CD79B, ENSG00000007312, IGB, P40259
CDH1	cadherin 1, type 1, E-cadherin (epithelial) (ECAD)	999	16	16q22.1	Mis, N, F, S	999, Arc-1, CCDS10869.1, CD324, CDH1, CDHE, ECAD, ENSG00000039068, LCAM, P12830, UVO, uvomorulin
CDH11	cadherin 11, type 2, OB-cadherin (osteoblast)	1009	16	16q22.1	T	1009, CAD11, CCDS10803.1, CDH11, ENSG00000140937, OB, P55287, Q59EQ1, Q96CZ9
CDK12	cyclin-dependent kinase 12	51755	17	17q12	Mis, N, F	51755, CCDS11337.1, CDK12, CRK7, CRKR, CRKRS, ENSG00000167258, KIAA0904, Q9NYV4
CDK4	cyclin-dependent kinase 4	1019	12	12q14	Mis	1019, CCDS8953.1, CDK4, CMM3, ENSG00000135446, MGC14458, P11802, PSK-J3
CDK6	cyclin-dependent kinase 6	1021	7	7q21-q22	T	1021, CCDS5628.1, CDK6, ENSG00000105810, MGC59692, PLSTIRE, Q00534
CDKN2A	cyclin-dependent kinase inhibitor 2A (p16(INK4a)) gene	1029	9	9p21	D, Mis, N, F, S	1029, ARF, CDK4I, CDKN2, CDKN2A, CMM2, ENSG00000147889, INK4, INK4a, MLM, MTS1, P42771, TP16, p14, p14ARF, p16, p16INK4, p16INK4a, p19
CDKN2C	cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)	1031	1	1p32	D	1031, CCDS555.1, CDKN2C, ENSG00000123080, INK4C, P42773, Q6ICV4, Q9P1T2, p18, p18-INK4C
CDKN2a(p14)	cyclin-dependent kinase inhibitor 2A-- p14ARF protein	1029	9	9p21	D, S	1029, ARF, CCDS6511, CDK4I, CDKN2, CDKN2a(p14), CMM2, ENSG00000147889, INK4, INK4a, MLM, MTS1, Q5ZEY9, Q8N726, TP16, p14, p14ARF, p16, p16INK4, p16INK4a, p19
CDX2	caudal type homeo box transcription factor 2	1045	13	13q12.3	T	1045, CCDS9328.1, CDX2, CDX3, ENSG00000165556, Q5VTU7, Q99626, Q9UD92
CEBPA	CCAAT/enhancer binding protein (C/EBP), alpha	1050	19	19q13.1	Mis, N, F	1050, C/EBP-alpha, CEBP, CEBPA, P49715
CEP1	centrosomal protein 1	11064	9	9q33	T	11064, A2A2Y1, CCDS35118.1, CEP1, CEP110, CNTRL, ENSG00000119397, Q3MN79, Q5FWF8, Q5JVD0, Q5JVD1, Q5JVD6, Q6PKC1, Q7Z7A1, Q8TEP3, Q9Y489
CHCHD7	coiled-coil-helix-coiled-coil-helix domain containing 7	79145	8	8q11.2	T	79145, CCDS34896.1, CHCHD7, ENSG00000170791, FLJ40966, MGC2217, Q9BUK0
CHEK2	CHK2 checkpoint homolog (S. pombe)	11200	22	22q12.1	F	11200, CCDS13843.1, CDS1, CHEK2, CHK2, ENSG00000183765, HuCds1, LFS2, O96017, PP1425, RAD53, RP11-436C9_1, bA444G7
CHIC2	cysteine-rich hydrophobic domain 2	26511	4	4q11-q12	T	26511, BTL, CCDS3493.1, CHIC2, Q9UKJ5
CHN1	chimerin (chimaerin) 1	1123	2	2q31-q32.1	T	1123, ARHGAP2, CHN, CHN1, ENSG00000128656, RHOGAP2, RhoGAP2, n-chimerin
CIC	capicua homolog	23152	19	19q13.2	Mis, F, S	23152, CCDS12601.1, CIC, ENSG00000079432, KIAA0306, Q96RK0
CIITA	class II, major histocompatibility complex, transactivator	4261	16	16p13	T	4261, A0N0N9, C2TA, CCDS10544.1, CIITA, ENSG00000179583, MHC2TA, P33076, Q29704, Q66X48, Q8SNB7, Q96KL4
CLTC	clathrin, heavy polypeptide (Hc)	1213	17	17q11-qter	T	1213, CCDS32696.1, CLTC, CLTCL2, ENSG00000141367, Q00610, Q49AL0
CLTCL1	clathrin, heavy polypeptide-like 1	8218	22	22q11.21	T	8218, CLTCL, CLTCL1, ENSG00000070371, P53675
CMKOR1	chemokine orphan receptor 1	57007	2	2q37.3	T	57007, CCDS2516.1, CMKOR1, CXCR7, ENSG00000144476, GPR159, P25106, RDC1
COL1A1	collagen, type I, alpha 1	1277	17	17q21.31-q22	T	1277, CCDS11561.1, COL1A1, ENSG00000108821, OI4, P02452, Q6LAN8, Q9UMA6
COPEB	core promoter element binding protein (KLF6)	1316	10	10p15	Mis, N	1316, BCD1, CCDS7060.1, COPEB, CPBP, DKFZp686N0199, ENSG00000067082, GBF, KLF6, PAC1, RP11-184A2_1, ST12, ZF9, Zf9
COX6C	cytochrome c oxidase subunit VIc	1345	8	8q22-q23	T	1345, CCDS6284.1, COX6C, ENSG00000164919, P09669
CREB1	cAMP responsive element binding protein 1	1385	2	2q34	T	1385, CREB1, ENSG00000118260
CREB3L1	cAMP responsive element binding protein 3-like 1	90993	11	11p11.2	T	90993, B2RA75, CREB3L1, ENSG00000157613, OASIS, Q96BA8
CREB3L2	cAMP responsive element binding protein 3-like 2	64764	7	7q34	T	64764, A2RRN1, BBF2H7, CCDS34760.1, CREB3L2, ENSG00000182158, MGC131709, MGC71006, Q6ZMR6, Q70SY1, Q8IY69, TCAG_1951439
CREBBP	CREB binding protein (CBP)	1387	16	16p13.3	T, N, F, Mis, O	1387, CBP, CCDS10509.1, CREBBP, ENSG00000005339, RSTS, RTS
CRLF2	cytokine receptor-like factor 2	64109	X,Y	Xp22.3; Yp11.3	Mis, T	CRLF2, ENSG00000205755, Q4V300
CRTC3	CREB regulated transcription coactivator 3	64784	15	15q26.1	T	64784, CCDS32331.1, CRTC3, ENSG00000140577, FLJ21868, Q6DK61, Q6DK62, Q6UUV7, Q8TEF4, Q9H6U2, TORC3
CTNNB1	catenin (cadherin-associated protein), beta 1	1499	3	3p22-p21.3	H, Mis, T	1499, CCDS2694.1, CTNNB, CTNNB1, ENSG00000168036, P35222
CYLD	familial cylindromatosis gene	1540	16	16q12-q13	Mis, N, F, S	1540, CDMT, CYLD, CYLD1, CYLDI, EAC, ENSG00000083799, FLJ20180, FLJ31664, HSPC057, KIAA0849, USPL2
D10S170	DNA segment on chromosome 10 (unique) 170, H4 gene (PTC1)	8030	10	10q21	T
DAXX	death-domain associated protein	1616	6	6p21.3	Mis, F, N	1616, A2AB94, BING2, CCDS4776.1, DAP6, DAQB-126H3_2, DAXX, ENSG00000206206, MGC126245, MGC126246, Q4VX54, Q53F85, Q59FG7, Q5STK9, Q5STR5, Q9UER7
DDB2	damage-specific DNA binding protein 2	1643	11	11p12	Mis, N	1643, CCDS7927.1, DDB2, ENSG00000134574, FLJ34321, Q92466
DDIT3	DNA-damage-inducible transcript 3	1649	12	12q13.1-q13.2	T	1649, CCDS8943.1, CEBPZ, CHOP, CHOP10, DDIT3, ENSG00000175197, GADD153, MGC4154, P35638, Q53YD1, _C/EBP zeta_
DDX10	DEAD (Asp-Glu-Ala-Asp) box polypeptide 10	1662	11	11q22-q23	T	1662, CCDS8342.1, DDX10, ENSG00000178105, HRH-J8, Q13206, Q59EC7, Q86VR6
DDX5	DEAD (Asp-Glu-Ala-Asp) box polypeptide 5	1655	17	17q21	T	1655, CCDS11659.1, DDX5, DKFZp686J01190, ENSG00000108654, G17P1, HLR1, HUMP68, P17844, Q7Z2V5, p68
DDX6	DEAD (Asp-Glu-Ala-Asp) box polypeptide 6	1656	11	11q23.3	T	1656, DDX6, ENSG00000110367, FLJ36338, HLR2, P26196, P54, Q8IV96, RCK
DEK	DEK oncogene (DNA binding)	7913	6	6p23	T	7913, CCDS34344.1, D6S231E, DEK, ENSG00000124795, P35659
DICER1	dicer 1, ribonuclease type III	23405	14	14q32.13	Mis F, N	23405, CCDS9931.1, DICER1, Dicer, ENSG00000100697, HERNA, K12H4_8-LIKE, KIAA0928, Q5D0K4, Q5D0K5, Q9UFF3, Q9UPY3
DNM2	dynamin 2	1785	19	19p13.2	F, N, Splice, Mis, O	1785, CCDS32907.1, CMTDI1, CMTDIB, DNM2, DYN2, DYNII, ENSG00000079805, Q9UPH5
DNMT3A	DNA (cytosine-5-)-methyltransferase 3 alpha	1788	2	2p23	Mis, F, N, S	1788, CCDS33157.1, DNMT3A, DNMT3A2, ENSG00000119772, M_HsaIIIA, Q59HC6, Q6PJ37, Q86TE8, Q86XF5, Q8IZV0, Q8WVA9, Q9Y6K1
DUX4	double homeobox, 4	22947	4	4q35	T	CCDS54828, DUX4, E0YLM6, F5GZ66, F8QWU0, F8QWU1, F8QWU2, P0CJ85, P0CJ86, P0CJ88, P0CJ89, P0CJ90, Q13060, Q14546, Q14547
EBF1	early B-cell factor 1	1879	5	5q34	T	1879, CCDS4343.1, COE1, EBF, EBF1, ENSG00000164330, O/E-1, OLF1, Q9UH73
ECT2L	epithelial cell transforming sequence 2 oncogene-like	345930	6	6q24.1	N, Splice, Mis	345930, C6orf91, CCDS43508.1, ECT2L, ENSG00000203734, LFDH, Q008S8, dJ509I19_2, dJ509I19_3
EGFR	epidermal growth factor receptor (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian)	1956	7	7p12.3-p12.1	A, O, Mis	1956, CCDS5514.1, EGFR, ENSG00000146648, ERBB, ERBB1, P00533, mENA
EIF4A2	eukaryotic translation initiation factor 4A, isoform 2	1974	3	3q27.3	T	1974, BM-010, CCDS3282.1, DDX2B, EIF4A, EIF4A2, EIF4F, ENSG00000156976
ELF4	E74-like factor 4 (ets domain transcription factor)	2000	X	Xq26	T	2000, CCDS14617.1, ELF4, ELFR, ENSG00000102034, MEF, Q5H9H5, Q99607, RP3-510O21_2
ELK4	ELK4, ETS-domain protein (SRF accessory protein 1)	2005	1	1q32	T	2005, CCDS1456.1, ELK4, ENSG00000158711, P28324, Q8IXL1, SAP1
ELKS	ELKS protein	23085	12	12p13.3	T	23085, A2RU77, CCDS8508.1, Cast2, ELKS, ENSG00000082805, ERC1, KIAA108, KIAA1081, MGC12974, Q8IUD2, RAB6IP2
ELL	ELL gene (11-19 lysine-rich leukemia gene)	8178	19	19p13.1	T	8178, C19orf17, CCDS12380.1, ELL, ELL1, ENSG00000105656, Men, P55199, Q59HG4, Q75MS0
ELN	elastin	2006	7	7q11.23	T	2006, CCDS5562.2, ELN, ENSG00000049540, FLJ38671, FLJ43523, Q9UMK5, SVAS, WBS, WS
EML4	echinoderm microtubule associated protein like 4	27436	2	2p21	T	27436, EML4, ENSG00000143924
EP300	300 kd E1A-Binding protein gene	2033	22	22q13	T, N, F, Mis, O	2033, CCDS14010.1, ENSG00000100393, EP300, RP1-85F18_1, p300
EPS15	epidermal growth factor receptor pathway substrate 15 (AF1p)	2060	1	1p32	T	2060, AF-1P, AF1P, CCDS557.1, ENSG00000085832, EPS15, MLLT5, P42566
ERBB2	v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)	2064	17	17q21.1	A, Mis, O	2064, ENSG00000141736, ERBB2, HER-2, HER-2/neu, HER2, NEU, NGL, P04626, TKR1, c-erb B2, c-erbB2
ERCC2	excision repair cross-complementing rodent repair deficiency, complementation group 2 (xeroderma pigmentosum D)	2068	19	19q13.2-q13.3	Mis, N, F, S	2068, CCDS33049.1, COFS2, EM9, ENSG00000104884, ERCC2, MAG, MGC102762, MGC126218, MGC126219, P18074, Q2TB78, Q7KZU6, TTD, XPD
ERCC3	excision repair cross-complementing rodent repair deficiency, complementation group 3 (xeroderma pigmentosum group B complementing)	2071	2	2q21	Mis, S	2071, BTF2, CCDS2144.1, ENSG00000163161, ERCC3, GTF2H, P19447, Q53HW5, Q53QM0, RAD25, TFIIH, XPB
ERCC4	excision repair cross-complementing rodent repair deficiency, complementation group 4	2072	16	16p13.3-p13.13	Mis, N, F	2072, A0PJA9, CCDS32390.1, ENSG00000175595, ERCC4, Q92889, RAD1, XPF
ERCC5	excision repair cross-complementing rodent repair deficiency, complementation group 5 (xeroderma pigmentosum, complementation group G (Cockayne syndrome))	2073	13	13q33	Mis, N, F	2073, COFS3, ENSG00000134899, ERCC5, ERCM2, RP11-484I6_5, UVDR, XPG, XPGC
ERG	v-ets erythroblastosis virus E26 oncogene like (avian)	2078	21	21q22.3	T	2078, CCDS13657.1, ERG, P11308
ETV1	ets variant gene 1	2115	7	7p22	T	2115, DKFZp781L0674, ENSG00000006468, ER81, ETV1, MGC104699, MGC120533, MGC120534
ETV4	ets variant gene 4 (E1A enhancer binding protein, E1AF)	2118	17	17q21	T	2118, CCDS11465.1, E1A-F, E1AF, ENSG00000175832, ETV4, PEA3, PEAS3
ETV5	ets variant gene 5	2119	3	3q28	T	2119, CCDS33906.1, ENSG00000244405, ERM, ETV5, P41161, Q6IBN5
ETV6	ets variant gene 6 (TEL oncogene)	2120	12	12p13	T	2120, CCDS8643.1, ENSG00000139083, ETV6, P41212, Q9UME7, TEL, TEL/ABL
EVI1	ecotropic viral integration site 1	2122	3	3q26	T	2122, A1L4F3, CCDS3205.1, ENSG00000085276, EVI1, MDS1-EVI1, MECOM, PRDM3, Q03112, Q5HYI1, Q6MZS6, Q8IU84, Q8NEI5
EWSR1	Ewing sarcoma breakpoint region 1 (EWS)	2130	22	22q12	T	2130, CCDS13851.1, ENSG00000182944, EWS, EWSR1
EXT1	multiple exostoses type 1 gene	2131	8	8q24.11-q24.13	Mis, N, F, S	2131, CCDS6324.1, ENSG00000182197, EXT, EXT1, Q16394, ttv
EXT2	multiple exostoses type 2 gene	2132	11	11p12-p11	Mis, N, F, S	2132, CCDS7908.1, ENSG00000151348, EXT2, Q6NUL1, Q93063, SOTV
EZH2	enhancer of zeste homolog 2	2146	7	7q35-q36	Mis	2146, B2RAQ1, B3KS30, CCDS5891.1, CCDS5892, ENSG00000106462, ENX-1, ENX1, EZH1, EZH2, EZH2_ENST00000350995, KMT6, MGC9169, Q15910, Q6R125, Q75MG3, Q75MP9, Q75MQ0, Q96FI6
EZR	ezrin	7430	6	6q25.3	T	7430, CCDS5258.1, CVIL, CVL, DKFZp762H157, ENSG00000092820, EZR, FLJ26216, MGC1584, P15311, Q6NUR7, Q9UJZ2, Q9UJZ6, Q9UJZ7, Q9UJZ8, Q9UK20
FACL6	fatty-acid-coenzyme A ligase, long-chain 6	23305	5	5q31	T	23305, ACS2, ACSL6, CCDS34228.1, ENSG00000164398, FACL6, KIAA0837, LACS2, LACS5
FAM22A	family with sequence similarity 22, member A	728118	10	10q23.2	T	ENSG00000214562, FAM22A, FAM22D
FAM22B	family with sequence similarity 22, member B	729262	10	10q22.3	T
FAM46C	family with sequence similarity 46, member C	54855	1	1p12	Mis, F, O	54855, A3KMG2, CCDS896.1, ENSG00000183508, FAM46C, FLJ20202, Q5VWP2
FANCA	Fanconi anemia, complementation group A	2175	16	16q24.3	D, Mis, N, F, S	2175, ENSG00000187741, FA, FA-H, FA1, FAA, FACA, FAH, FANCA, FANCH, MGC75158
FANCC	Fanconi anemia, complementation group C	2176	9	9q22.3	D, Mis, N, F, S	2176, ENSG00000158169, FA3, FAC, FACC, FANCC, FLJ14675, RP11-80I15_2
FANCD2	Fanconi anemia, complementation group D2	2177	3	3p26	D, Mis, N, F	2177, CCDS2595.1, DKFZp762A223, ENSG00000144554, FA-D2, FA4, FACD, FAD, FAD2, FANCD, FANCD2, FLJ23826
FANCE	Fanconi anemia, complementation group E	2178	6	6p21-p22	N, F, S	2178, CCDS4805.1, ENSG00000112039, FACE, FAE, FANCE
FANCF	Fanconi anemia, complementation group F	2188	11	11p15	N, F	2188, CCDS7857.1, ENSG00000183161, FAF, FANCF, MGC126856, Q53FK7, Q6MZN0, Q9NPI8
FANCG	Fanconi anemia, complementation group G	2189	9	9p13	Mis, N, F, S	2189, CCDS6574.1, ENSG00000221829, FAG, FANCG, O15287, Q53XM5, XRCC9
FBXO11	F-box protein 11	80204	2	2p16.3	Mis, F, D	80204, A1L491, CCDS1837.1, ENSG00000138081, FBX11, FBXO11, FLJ12673, MGC44383, PRMT9, Q53RT5, Q86XK2, UG063H01, VIT1
FBXW7	F-box and WD-40 domain protein 7 (archipelago homolog, Drosophila)	55294	4	4q31.3	Mis, N, D, F	55294, AGO, CCDS3777.1, CCDS3778.1, CDC4, DKFZp686F23254, ENSG00000109670, FBW7, FBX30, FBXW6, FBXW7, FBXW7_NM_018315_2, FLJ11071, SEL-10, SEL10
FCGR2B	Fc fragment of IgG, low affinity IIb, receptor for (CD32)	2213	1	1q23	T	2213, CCDS30924.1, CD32, CD32B, ENSG00000072694, FCG2, FCGR2, FCGR2B, IGFR2, P31994, Q8IU78, Q8IU79, Q8IXE8, Q8IXE9, Q8IZV7, Q8NI89, Q8NIA0
FEV	FEV protein - (HSRNAFEV)	54738	2	2q36	T	54738, CCDS2428.1, ENSG00000163497, FEV, HSRNAFEV, PET-1, Pet-1
FGFR1	fibroblast growth factor receptor 1	2260	8	8p11.2-p11.1	T	2260, BFGFR, CD331, CEK, ENSG00000077782, FGFBR, FGFR1, FLG, FLT2, H2, H3, H4, H5, HBGFR, KAL2, N-SAM, P11362
FGFR1OP	FGFR1 oncogene partner (FOP)	11116	6	6q27	T	11116, CCDS5297.1, ENSG00000213066, FGFR1OP, FOP
FGFR2	fibroblast growth factor receptor 2	2263	10	10q26	Mis	2263, BEK, BFR-1, CD332, CEK3, CFD1, ECT1, ENSG00000066468, FGFR2, JWS, K-SAM, KGFR, TK14, TK25
FGFR3	fibroblast growth factor receptor 3	2261	4	4p16.3	Mis, T	2261, ACH, CCDS3353.1, CD333, CEK2, ENSG00000068078, FGFR3, HSFGFR3EX, JTK4, P22607
FH	fumarate hydratase	2271	1	1q42.1	Mis, N, F	2271, CCDS1617.1, ENSG00000091483, FH, HLRCC, LRCC, MCL, MCUL1, P07954, Q5SY06
FHIT	fragile histidine triad gene	2272	3	3p14.2	T	2272, A2IAS9, A2IAT6, AP3Aase, CCDS2894.1, ENSG00000189283, FHIT, FRA3B, O00298, P49789, Q0MQR8, Q0PUW1, Q194U8, Q194V0, Q1WAB3, Q45QG9, Q5G284, Q71VB2
FIP1L1	FIP1 like 1 (S. cerevisiae)	81608	4	4q12	T	81608, CCDS3491.1, DKFZp586K0717, ENSG00000145216, FIP1L1, Q6UN15
FLI1	Friend leukemia virus integration 1	2313	11	11q24	T	2313, ENSG00000151702, EWSR2, FLI1, Q01543, SIC-1
FLJ27352	BX648577, FLJ27352 hypothetical LOC145788	145788	15	15q21.3	T
FLT3	fms-related tyrosine kinase 3	2322	13	13q12	Mis, O	2322, CD135, ENSG00000122025, FLK2, FLT3, P36888, RP11-153M24_3, STK1
FNBP1	formin binding protein 1 (FBP17)	23048	9	9q23	T	8412, BCAR3, ENSG00000137936, FNBP1, KIAA0554, NSP2, SH2D3B
FOXL2	forkhead box L2	668	3	3q23	Mis	668, BPES, BPES1, CCDS3105.1, ENSG00000183770, FOXL2, P58012, PFRK, PINTO, POF3, Q05CX9, Q4JHB5, Q4JHB7, Q53ZD3
FOXO1A	forkhead box O1A (FKHR)	2308	13	13q14.1	T	2308, CCDS9371.1, ENSG00000150907, FKH1, FKHR, FOXO1, FOXO1A, Q12778
FOXO3A	forkhead box O3A	2309	6	6q21	T	2309, AF6q21, CCDS5068.1, DKFZp781A0677, ENSG00000118689, FKHRL1, FKHRL1P2, FOXO2, FOXO3, FOXO3A, MGC12739, MGC31925, O43524, Q68DV3, Q9UPC2
FOXP1	forkhead box P1	27086	3	3p14.1	T	12CC4, 27086, CCDS2914.1, ENSG00000114861, FLJ23741, FOXP1, HSPC215, MGC12942, MGC88572, MGC99551, QRF1, hFKH1B
FSTL3	follistatin-like 3 (secreted glycoprotein)	10272	19	19p13	T	10272, CCDS12040.1, ENSG00000070404, FLRG, FSTL3, O95633
FUBP1	far upstream element (FUSE) binding protein 1	8880	1	1p13.1	F, N	8880, CCDS683.1, ENSG00000162613, FBP, FUBP, FUBP1
FUS	fusion, derived from t(12;16) malignant liposarcoma	2521	16	16p11.2	T	2521, CCDS10707.1, CHOP, ENSG00000089280, FUS, FUS-CHOP, FUS1, P35637, Q13344, Q6IBQ5, Q8TBR3, TLS, TLS/CHOP
FVT1	follicular lymphoma variant translocation 1	2531	18	18q21.3	T	2531, CCDS11982.1, ENSG00000119537, FVT1, KDSR, Q06136
GAS7	growth arrest-specific 7	8522	17	17p	T	8522, CCDS11152.1, ENSG00000007237, GAS7, KIAA0394, MGC1348, MLL/GAS7, O60861, Q29RX5, Q53Y77, Q59GS9, Q7Z571
GATA1	GATA binding protein 1 (globin transcription factor 1)	2623	X	Xp11.23	Mis, F	2623, CCDS14305.1, ENSG00000102145, ERYF1, GATA1, GF1, NFE1, P15976
GATA2	GATA binding protein 2	2624	3	3q21.3	Mis	2624, CCDS3049.1, ENSG00000179348, GATA2, MGC2306, NFE1B, P23769, Q53YE0, Q96BH0, Q96BH8
GATA3	GATA binding protein 3	2625	10	10p15	F, N, S	2625, CCDS31143.1, ENSG00000107485, GATA3, HDR, MGC2346, MGC5199, MGC5445, Q5VWG7
GMPS	guanine monphosphate synthetase	8833	3	3q24	T	8833, ENSG00000163655, GMPS
GNA11	guanine nucleotide binding protein (G protein), alpha 11 (Gq class)	2767	19	19p13.3	Mis	2767, CCDS12103.1, ENSG00000088256, GNA-11, GNA11
GNAQ	guanine nucleotide binding protein (G protein), q polypeptide	2776	9	9q21	Mis	2776, CCDS6658.1, ENSG00000156052, G-ALPHA-q, GAQ, GNAQ, P50148, Q5T8F3, Q6NT27, RP11-494N1_1
GNAS	guanine nucleotide binding protein (G protein), alpha stimulating activity polypeptide 1	2778	20	20q13.2	Mis	2778, AHO, C20orf45, CCDS13471.1, ENSG00000087460, GNAS, GNAS1, GNASXL, GNAS_NM_016592_1, GPSA, GSA, GSP, Gnas, MGC33735, NESP, NESP55, PHP1A, PHP1B, POH, RP4-543J19_4, SCG6, XL, XL2, XLalphas, dJ309F20_1_1, dJ806M20_3_3
GOLGA5	golgi autoantigen, golgin subfamily a, 5 (PTC5)	9950	14	14q	T	9950, CCDS9905.1, ENSG00000066455, GOLGA5, Q2TS49, Q8TBA6, golgin-84, ret-II, rfg5
GOPC	golgi associated PDZ and coiled-coil motif containing	57120	6	6q21	O	57120, CAL, CCDS5117.1, ENSG00000047932, FIG, GOPC, GOPC1, Q9HD26, dJ94G16_2 PIST
GPC3	glypican 3	2719	X	Xq26.1	T, D, Mis, N, F, S	2719, AC002420_1, CCDS14638.1, DGSX, ENSG00000147257, GPC3, OCI-5, P51654, Q1MTS4, Q2L880, Q53H15, Q8IYG2, SDYS, SGB, SGBS, SGBS1
GPHN	gephyrin (GPH)	10243	14	14q24	T	10243, CCDS9777.1, ENSG00000171723, GPHN
GRAF	GTPase regulator associated with focal adhesion kinase pp125(FAK)	23092	5	5q31	T, F, S	23092, ARHGAP26, ENSG00000145819, FLJ42530, GRAF, KIAA0621, OPHN1L, OPHN1L1
H3F3A	H3 histone, family 3A	3020	1	1q42.12	Mis	3020, CCDS1550.1, ENSG00000163041, H3F3, H3F3A, H3_3A, H3_3B, LOC347376, MGC87782, MGC87783, P84243, Q6TXQ4
HCMOGT-1	sperm antigen HCMOGT-1	92521	17	17p11.2	T	92521, CCDS32590.1, CYTSB, ENSG00000128487, FLJ36955, HCMOGT-1, NSP, Q5M775, SPECC1
HEAB	ATP_GTP binding protein	10978	11	11q12	T	10978, CCDS7964.1, CLP1, ENSG00000172409, HEAB, Q92989, hClp1
HERPUD1	homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1	9709	16	16q12.2-q13	T	9709, A4UAE9, CCDS10771.1, ENSG00000051108, HERP, HERPUD1, KIAA0025, Mif1, Q15011, Q53FP9, Q6IAN8, Q9HBR2, SUP
HEY1	hairy/enhancer-of-split related with YRPW motif 1	23462	8	8q21	T	23462, CCDS6225.1, CHF-2, CHF2, ENSG00000164683, HERP2, HESR-1, HESR1, HEY1, HRT-1, MGC1274, OAF1
HIP1	huntingtin interacting protein 1	3092	7	7q11.23	T	3092, ENSG00000127946, HIP1, ILWEQ, Q8TDA4
HIST1H4I	histone 1, H4i (H4FM)	8294	6	6p21.3	T	8294, CCDS4620.1, HIST1H4I, HIST4H4, MGC24116, P62805, Q0VAS5, Q6B823, Q6DRA9, Q6FGB8, Q6NWP7
HLF	hepatic leukemia factor	3131	17	17q22	T	3131, CCDS11585.1, ENSG00000108924, HLF, Q16534, Q6FHS9
HLXB9	homeo box HB9	3110	7	7q36	T	3110, CCDS34788.1, ENSG00000130675, HB9, HLXB9, MNX1, P50219, Q9UDY3
HMGA1	high mobility group AT-hook 1	3159	6	6p21	T	3159, CCDS4789.1, ENSG00000137309, HMG-R, HMGA1, HMGIY, MGC12816, MGC4242, MGC4854, P17096, Q5T6U9
HMGA2	high mobility group AT-hook 2 (HMGIC)	8091	12	12q15	T	8091, BABL, ENSG00000149948, HMGA2, HMGI-C, HMGIC, LIPO
HNRNPA2B1	heterogeneous nuclear ribonucleoprotein A2/B1	3181	7	7p15	T	3181, CCDS5397.1, ENSG00000122566, HNRNPA2, HNRNPA2B1, HNRNPB1, HNRPA2, HNRPB1, RNPA2, SNRPB1
HOOK3	hook homolog 3	84376	8	8p11.21	T	84376, CCDS6139.1, ENSG00000168172, HK3, HOOK3, Q86VS8
HOXA11	homeo box A11	3207	7	7p15-p14.2	T	3207, CCDS5411.1, ENSG00000005073, HOX1, HOX1I, HOXA11, P31270
HOXA13	homeo box A13	3209	7	7p15-p14.2	T	3209, CCDS5412.1, ENSG00000106031, HOX1, HOX1J, HOXA13, P31271, Q6DI00
HOXA9	homeo box A9	3205	7	7p15-p14.2	T	3205, CCDS5409.1, ENSG00000078399, HOX1, HOX1G, HOXA9, P31269
HOXC11	homeo box C11	3227	12	12q13.3	T	3227, CCDS8867.1, ENSG00000123388, HOX3H, HOXC11, O43248
HOXC13	homeo box C13	3229	12	12q13.3	T	3229, CCDS8865.1, ENSG00000123364, HOX3, HOX3G, HOXC13, P31276, Q6LAM3
HOXD11	homeo box D11	3237	2	2q31-q32	T	3237, CCDS2265.1, ENSG00000128713, HOXD11
HOXD13	homeo box D13	3239	2	2q31-q32	T	3239, CCDS2264.1, HOX4I, HOXD13, P35453, SPD
HRAS	v-Ha-ras Harvey rat sarcoma viral oncogene homolog	3265	11	11p15.5	Mis	3265, CCDS7698.1, ENSG00000174775, HRAS, HRAS1, K-ras, N-ras, P01112, RASH1, c-bas/has
HRPT2	hyperparathyroidism 2	3279	1	1q21-q31	Mis, N, F	79577, C1orf28, CCDS1382.1, CDC73, ENSG00000134371, FLJ23316, HPT-JT, HRPT2, Q6P1J9, Q6PHR8
HSPCA	heat shock 90kDa protein 1, alpha	3320	14	14q32.31	T	3320, CCDS32160.1, ENSG00000080824, FLJ31884, HSP86, HSP90A, HSP90AA1, HSP90N, HSPC1, HSPCA, HSPCAL1, HSPCAL4, HSPN, Hsp89, Hsp90, LAP2, O75322, P07900, Q14568, Q2VPJ6, Q5CAQ6, Q5CAQ7, Q86SX1, Q86U12, Q8TBA7, Q96HX7
HSPCB	heat shock 90kDa protein 1, beta	3326	6	6p12	T	3326, CCDS4909.1, D6S182, ENSG00000096384, FLJ26984, HSP90-BETA, HSP90AB1, HSP90B, HSPC2, HSPCB, P08238, Q6PK50, Q9H6X9
IDH1	isocitrate dehydrogenase 1 (NADP+), soluble	3417	2	2q33.3	Mis	3417, CCDS2381.1, ENSG00000138413, IDH, IDH1, IDP, O75874, PICD, Q0QER2, Q567U4, Q6FHQ6, Q6FI37, Q6FIA4, Q7Z3V0
IDH2	socitrate dehydrogenase 2 (NADP+), mitochondrial	3418	15	15q26.1	M	3418, CCDS10359.1, ENSG00000182054, ICD-M, IDH, IDH2, IDHM, IDP, P48735, Q53GL5, mNADP-IDH
IGH@	immunoglobulin heavy locus	3492	14	14q32.33	T
IGK@	immunoglobulin kappa locus	50802	2	2p12	T
IGL@	immunoglobulin lambda locus	3535	22	22q11.1-q11.2	T
IKZF1	IKAROS family zinc finger 1	10320	7	7p12.2	D,T	10320, ENSG00000185811, Hs_54452, IKAROS, IKZF1, LyF-1, Q13422, ZNFN1A1, hIk-1
IL2	interleukin 2	3558	4	4q26-q27	T	3558, CCDS3726.1, ENSG00000109471, IL-2, IL2, P60568, Q0GK43, Q13169, Q16334, Q309Q7, Q6NZ91, Q6NZ93, Q6QWN0, Q71V48, Q7Z7M3, Q8NFA4, Q9C001
IL21R	interleukin 21 receptor	50615	16	16p11	T	50615, CCDS10630.1, ENSG00000103522, IL21R, Q9HBE5
IL6ST	interleukin 6 signal transducer (gp130, oncostatin M receptor)	3572	5	5q11	O	3572, A0N0L4, CCDS3971.1, CD130, CDw130, ENSG00000134352, GP130, GP130-RAPS, IL6R-beta, IL6ST, P40189, Q17RA0
IL7R	interleukin 7 receptor	146661	5	5p13	Mis, O	3575, CCDS3911.1, CD127, CDW127, ENSG00000168685, IL-7R-alpha, IL7R, P16871, Q05CU8, Q6NSP4, Q6NWM0, Q6NWM1, Q6NWM2, Q6NWM3
IRF4	interferon regulatory factor 4	3662	6	6p25-p23	T	3662, CCDS4469.1, ENSG00000137265, IRF4, LSIRF, MUM1, Q15306
IRTA1	immunoglobulin superfamily receptor translocation associated 1	83417	1	1q21	T	83417, CCDS1166.1, ENSG00000163518, FCRH4, FCRL4, IGFP2, IRTA1, Q96PJ5, Q96RE0
ITK	IL2-inducible T-cell kinase	3702	5	5q31-q32	T	3702, CCDS4336.1, EMT, ENSG00000113263, ITK, LYK, MGC126257, MGC126258, PSCTK2, Q08881
JAK1	Janus kinase 1	3716	1	1p32.3-p31.3	Mis	3716, CCDS41346, ENSG00000162434, JAK1, JAK1A, JAK1B, JAK1_ENST00000342505, JTK3, P23458, Q0VGA4, Q4LDX3, Q6P669, Q8IV82
JAK2	Janus kinase 2	3717	9	9p24	T, Mis, O	3717, A8K910, A9QVL8, B4DYV1, CCDS6457, ENSG00000096968, JAK2, JAK2_ENST00000381652, JTK10, O60674, Q506Q0, Q52R86, Q8IXP2
JAK3	Janus kinase 3	3718	19	19p13.1	Mis	3718, CCDS12366.1, ENSG00000105639, JAK-3, JAK3, JAK3_HUMAN, JAKL, L-JAK, LJAK, P52333
JAZF1	juxtaposed with another zinc finger gene 1	221895	7	7p15.2-p15.1	T	221895, CCDS5416.1, ENSG00000153814, JAZF1, Q69YN3, Q86VZ6
JUN	jun oncogene	3725	1	1p32-p31	A	3725, AP1, CCDS610.1, ENSG00000177606, JUN, P05412, Q6FHK0, Q6FHM7, c-Jun
KDM5A	lysine (K)-specific demethylase 5A, JARID1A	5927	12	12p11	T	5927, ENSG00000073614, JARID1A, KDM5A, RBBP2, RBP2
KDM5C	lysine (K)-specific demethylase 5C (JARID1C)	8242	X	Xp11.22-p11.21	N, F, S	8242, DXS1272E, ENSG00000126012, JARID1C, KDM5C, MRXJ, MRXSJ, RP11-258C19_2, SMCX, XE169
KDM6A	lysine (K)-specific demethylase 6A, UTX	7403	X	Xp11.2	D, N, F, S	7403, CCDS14265.1, DKFZp686A03225, ENSG00000147050, KDM6A, MGC141941, O15550, Q52LL9, Q590H7, Q59HG3, Q5JV43, Q68D33, Q6N053, RP13-886N14_3, UTX, bA386N14_2
KDR	vascular endothelial growth factor receptor 2	3791	4	4q11-q12	Mis	3791, CCDS3497.1, CD309, ENSG00000128052, FLK1, KDR, P35968, VEGFR, VEGFR2
KIAA1549	KIAA1549	57670	7	7q34	O	57670, ENSG00000122778, KIAA1549
KIF5B	kinesin family member 5B	3799	10	10p11.22	T	3799, CCDS7171.1, ENSG00000170759, KIF5B, KINH, KNS, KNS1, P33176, Q2TA90, Q66K46, Q6P164, UKHC
KIT	v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog	3815	4	4q12	Mis, O	3815, C-Kit, CD117, ENSG00000157404, KIT, P10721, SCFR
KLK2	kallikrein-related peptidase 2	3817	19	19q13.41	T	3817, CCDS12808.1, ENSG00000167751, KLK2, KLK2A2, MGC12201, P20151, Q6T775, hK2
KRAS	v-Ki-ras2 Kirsten rat sarcoma 2 viral oncogene homolog	3845	12	12p12.1	Mis	3845, C-K-RAS, CCDS8702.1, K-RAS2A, K-RAS2B, K-RAS4A, K-RAS4B, KI-RAS, KRAS, KRAS1, KRAS2, NS3, P01116, RASK2
KTN1	kinectin 1 (kinesin receptor)	3895	14	14q22.1	T	3895, CCDS9725.1, CG1, ENSG00000126777, KIAA0004, KTN1, Q17RZ5, Q3SWV9, Q5GGW3, Q6NZ46, Q6PDF7, Q86UP2
LAF4	lymphoid nuclear protein related to AF4	3899	2	2q11.2-q12	T	3899, AFF3, CCDS33258.1, ENSG00000144218, LAF4, MLLT2-like, P51826
LASP1	LIM and SH3 protein 1	3927	17	17q11-q21.3	T	3927, CCDS11331.1, ENSG00000002834, LASP1, Lasp-1, MLN50, Q14847
LCK	lymphocyte-specific protein tyrosine kinase	3932	1	1p35-p34.3	T	3932, ENSG00000182866, LCK, P06239, YT16, p56lck, pp58lck
LCP1	lymphocyte cytosolic protein 1 (L-plastin)	3936	13	13q14.1-q14.3	T	3936, CCDS9403.1, CP64, DKFZp781A23186, ENSG00000136167, FLJ25423, FLJ26114, FLJ39956, L-PLASTIN, LC64P, LCP1, P13796, PLS2, Q53FI1, Q59GX5, Q5TBN3, Q5TBN4, Q5TBN5
LCX	leukemia-associated protein with a CXXC domain	80312	10	10q21	T	80312, CCDS7281.1, CXXC6, ENSG00000138336, KIAA1676, LCX, Q8NFU7, TET1, bA119F7_1
LHFP	lipoma HMGIC fusion partner	10186	13	13q12	T	10186, CCDS9369.1, ENSG00000183722, LHFP, MGC22429
LIFR	leukemia inhibitory factor receptor	3977	5	5p13-p12	T	3977, CCDS3927.1, CD118, ENSG00000113594, LIFR, SJS2, STWS, SWS
LMO1	LIM domain only 1 (rhombotin 1) (RBTN1)	4004	11	11p15	T, A	4004, ENSG00000166407, LMO1, P25800, Q8IXR0, RBTN1, RHOM1, TTG1
LMO2	LIM domain only 2 (rhombotin-like 1) (RBTN2)	4005	11	11p13	T	4005, CCDS7888.1, ENSG00000135363, LMO2, P25791, RBTN2, RBTNL1, RHOM2, TTG2
LPP	LIM domain containing preferred translocation partner in lipoma	4026	3	3q28	T	4026, A1L4L6, CCDS3291.1, ENSG00000145012, LPP, Q93052
LRIG3	leucine-rich repeats and immunoglobulin-like domains 3	121227	12	12q14.1	T	121227, CCDS8960.1, ENSG00000139263, FLJ26573, FLJ90440, KIAA3016, LRIG3, Q6UXM1
LYL1	lymphoblastic leukemia derived sequence 1	4066	19	19p13.2-p13.1	T	4066, CCDS12292.1, ENSG00000104903, LYL1, P12980
MADH4	Homolog of Drosophila Mothers Against Decapentaplegic 4 gene	4089	18	18q21.1	D, Mis, N, F	4089, CCDS11950.1, DPC4, ENSG00000141646, JIP, MADH4, Q13485, Q9BYG6, SMAD4
MAF	v-maf musculoaponeurotic fibrosarcoma oncogene homolog	4094	16	16q22-q23	T	4094, CCDS10928.1, ENSG00000178573, MAF, MGC71685
MAFB	v-maf musculoaponeurotic fibrosarcoma oncogene homolog B (avian)	9935	20	20q11.2-q13.1	T	9935, CCDS13311.1, ENSG00000204103, KRML, MAFB, MGC43127, Q9Y5Q3
MALT1	mucosa associated lymphoid tissue lymphoma translocation gene 1	10892	18	18q21	T	10892, CCDS11968.1, ENSG00000172175, MALT1
MAML2	mastermind-like 2 (Drosophila)	84441	11	11q22-q23	T	84441, DKFZp686N0150, ENSG00000184384, KIAA1819, MAM-3, MAM2, MAM3, MAML2, MLL-MAML2, Q8IZL2
MAP2K4	mitogen-activated protein kinase kinase 4	6416	17	17p11.2	D, Mis, N	6416, CCDS11162.1, ENSG00000065559, JNKK, JNKK1, MAP2K4, MAPKK4, MEK4, MKK4, P45985, PRKMK4, SEK1, SERK1
MDM2	Mdm2 p53 binding protein homolog	4193	12	12q15	A	4193, CCDS8986.1, ENSG00000135679, HDM2, HDMX, MDM2, MGC71221, Q00987, Q546E6, Q8NDV9, Q8WYJ3, Q96DS4, hdm2
MDM4	Mdm4 p53 binding protein homolog	4194	1	1q32	A	4194, CCDS1447.1, DKFZp781B1423, ENSG00000198625, MDM4, MDMX, MGC132766, MRP1, RP11-430C7_1
MDS1	myelodysplasia syndrome 1	4197	3	3q26	T	4197, MDS1, MDS1-EVI1, PRDM3, Q13465, Q6FH90
MDS2	myelodysplastic syndrome 2	259283	1	1p36	T	259283, ENSG00000197880, MDS2, Q8NDY4
MECT1	mucoepidermoid translocated 1	94159	19	19p13	T	23373, CCDS32963.1, CRTC1, ENSG00000105662, FLJ14027, KIAA0616, MECT1, Q6UUV9, TORC1, WAMTP1
MED12	mediator complex subunit 12	9968	X	Xq13	M, S	9968, ARC240, CAGH45, CCDS43970, FGS1, HOPA, KIAA0192, MED12, MED12_ENST00000374080, OKS, OPA1, Q7Z2E0, Q7Z2F1, Q7Z2F4, Q93074, TNRC11, TRAP230
MEN1	multiple endocrine neoplasia type 1 gene	4221	11	11q13	D, Mis, N, F, S	4221, CCDS31600.1, ENSG00000133895, MEN1, Q9BUF0, Q9GZQ5, Q9UE24
MET	met proto-oncogene (hepatocyte growth factor receptor)	4233	7	7q31	Mis	4233, AUTS9, ENSG00000105976, HGFR, MET, P08581, RCCP2
MITF	microphthalmia-associated transcription factor	4286	3	3p14.1	A	4286, CCDS2913.1, ENSG00000187098, MITF, WS2A
MKL1	megakaryoblastic leukemia (translocation) 1	57591	22	22q13	T	57591, A4FUJ8, BSAC, CCDS14003.1, ENSG00000196588, MAL, MKL1, MRTF-A, Q29R68, Q969V6
MLF1	myeloid leukemia factor 1	4291	3	3q25.1	T	4291, CCDS3182.1, ENSG00000178053, MLF1, P58340, Q2TLE3, Q2TLE4
MLH1	E.coli MutL homolog gene	4292	3	3p21.3	D, Mis, N, F, S	4292, CCDS2663.1, COCA2, ENSG00000076242, FCC2, HNPCC, HNPCC2, MGC5172, MLH1, P40692, Q0ZAJ3, Q0ZAJ6, Q53GX1, Q5GJ64, Q64FK0, Q6VBB8, hMLH1
MLL	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila)	4297	11	11q23	T, O	4297, ALL-1, CXXC7, ENSG00000118058, HRX, HTRX1, MLL, MLL/GAS7, MLL1A, TRX1
MLL2	myeloid/lymphoid or mixed-lineage leukemia 2	8085	12	12q12-q14	N, F, Mis	8085, ENSG00000167548, MLL2
MLL3	myeloid/lymphoid or mixed-lineage leukemia 3	58508	7	7q36.1	N	58508, ENSG00000055609, MLL3
MLLT1	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1 (ENL)	4298	19	19p13.3	T	4298, CCDS12160.1, ENL, ENSG00000130382, LTG19, MLLT1, Q03111, YEATS1
MLLT10	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10 (AF10)	8028	10	10p12	T	8028, AF10, CCDS7135.1, ENSG00000078403, MLLT10, O60696, P55197, Q59EQ6, Q71UR7
MLLT2	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 2 (AF4)	4299	4	4q21	T	4299, AF-4, AFF1, CCDS3616.1, ENSG00000172493, MLLT2, P51825, PBM1, Q05D98, Q14C88, Q6LA76, Q712L1
MLLT3	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 (AF9)	4300	9	9p22	T	4300, AF-9, AF9, CCDS6494.1, ENSG00000171843, MLLT3, P42568, Q5VV08, Q5VV09, Q6LEQ8, Q6MZE2, Q8IVB0, YEATS3
MLLT4	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4 (AF6)	4301	6	6q27	T	4301, CCDS5303.1, ENSG00000130396, MLLT4, Q5TIG7, Q5TIH1, Q96C95
MLLT6	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 6 (AF17)	4302	17	17q21	T	4302, AF17, CCDS11327.1, ENSG00000108292, MLLT6, P55198, Q59F28, Q96IU3, Q9H5F6
MLLT7	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 7 (AFX1)	4303	X	Xq13.1	T	4303, AFX1, ENSG00000184481, FOXO4, MLLT7, P98177
MN1	meningioma (disrupted in balanced translocation) 1	4330	22	22q13	T	4330, A5HML1, A9Z1V9, CCDS42998.1, ENSG00000169184, MGCR, MGCR1, MGCR1-PEN, MN1, Q10571, dJ353E16_2
MPL	myeloproliferative leukemia virus oncogene, thrombopoietin receptor	4352	1	p34	Mis	4352, C-MPL, CCDS483.1, CD110, ENSG00000117400, MPL, MPLV, P40238, Q308M1, Q5JUZ0, RP1-92O14_1, TPOR
MSF	MLL septin-like fusion	10801	17	17q25	T	10801, AF17q25, ENSG00000184640, KIAA0991, MSF, MSF1, NAPB, PNUTL4, SEPT9, SINT1, SeptD1
MSH2	mutS homolog 2 (E. coli)	4436	2	2p22-p21	D, Mis, N, F, S	4436, CCDS1834.1, COCA1, ENSG00000095002, FCC1, HNPCC, HNPCC1, MSH2, P43246, Q0ZAI9, Q0ZAJ1, Q53FK0, Q53GS1, Q53RU4, Q6VBB7
MSH6	mutS homolog 6 (E. coli)	2956	2	2p16	Mis, N, F, S	2956, CCDS1836.1, ENSG00000116062, GTBP, HNPCC5, HSAP, MSH6, P52701, Q1L838, Q3SWU9
MSI2	musashi homolog 2 (Drosophila)	124540	17	17q23.2	T	124540, CCDS11597.1, ENSG00000153944, MSI2
MSN	moesin	4478	X	Xq11.2-q12	T	4478, CCDS14382.1, ENSG00000147065, MSN, P26038, Q6PJT4
MTCP1	mature T-cell proliferation 1	4515	X	Xq28	T	4515, C6_1B, ENSG00000214827, GS1-273L24_4, MTCP1
MUC1	mucin 1, transmembrane	4582	1	1q21	T	4582, CCDS1098.1, CD227, EMA, ENSG00000185499, H23AG, MAM6, MUC1, PEM, PEMT, PUM, Q14877, Q4VX39, Q7Z545
MUTYH	mutY homolog (E. coli)	4595	1	1p34.3-1p32.1	Mis	4595, CCDS520.1, ENSG00000132781, MGC4416, MUTYH, MYH, MYHbeta, hMYH
MYB	v-myb myeloblastosis viral oncogene homolog	4602	6	6q22-23	T	4602, CCDS5174.1, Cmyb, ENSG00000118513, MYB, MYB_ENST00000341911, P10242, Q5THS4, Q5THS5, Q708E1, Q708E3, Q708E4, Q708E5, Q708E7, Q708E9, Q708J0, Q9UMI7, c-myb, c-myb_CDS, efg
MYC	v-myc myelocytomatosis viral oncogene homolog (avian)	4609	8	8q24.12-q24.13	A, T	4609, ENSG00000136997, MYC, c-Myc
MYCL1	v-myc myelocytomatosis viral oncogene homolog 1, lung carcinoma derived (avian)	4610	1	1p34.3	A	4610, ENSG00000116990, LMYC, MYCL, MYCL1
MYCN	v-myc myelocytomatosis viral related oncogene, neuroblastoma derived (avian)	4613	2	2p24.1	A	4613, CCDS1687.1, ENSG00000134323, MODED, MYCN, N-myc, NMYC, ODED
MYD88	myeloid differentiation primary response gene (88)	4615	3	3p22	Mis	4615, B4DKU4, B4DU08, B4E3D6, CCDS2674, MYD88, MYD88D, MYD88_ENST00000396334, Q99836
MYH11	myosin, heavy polypeptide 11, smooth muscle	4629	16	16p13.13-p13.12	T	4629, CCDS10566.1, ENSG00000133392, MYH11, O14729, Q16085, Q3MIV8, Q3MNF0, Q4G140, Q68D89, Q7Z7R0
MYH9	myosin, heavy polypeptide 9, non-muscle	4627	22	22q13.1	T	4627, CCDS13927.1, DFNA17, ENSG00000100345, MYH9, P35579, Q2PS10, Q60FE2, Q86XU5, Q99529, Q9UMJ0
MYST4	MYST histone acetyltransferase (monocytic leukemia) 4 (MORF)	23522	10	10q22	T	23522, CCDS7345.1, DKFZp313G1618, ENSG00000156650, FLJ90335, KIAA0383, MORF, MOZ2, MYST4, Q8WYB5, qkf, querkopf
NACA	nascent-polypeptide-associated complex alpha polypeptide	4666	12	12q23-q24.1	T	4666, CCDS31837.1, ENSG00000196531, FKSG17, HSD48, MGC117224, NACA, NACA1, NACAP1, Q13765, Q9BZK3
NBS1	Nijmegen breakage syndrome 1 (nibrin)	4683	8	8q21	Mis, N, F	4683, AT-V1, AT-V2, ATV, CCDS6249.1, ENSG00000104320, FLJ10155, MGC87362, NBN, NBS, NBS1
NCOA1	nuclear receptor coactivator 1	8648	2	2p23	T	8648, CCDS1712.1, ENSG00000084676, F-SRC-1, MGC129719, MGC129720, NCOA1, NCoA-1, RIP160, SRC1
NCOA2	nuclear receptor coactivator 2 (TIF2)	10499	8	8q13.1	T	10499, ENSG00000140396, GRIP1, MGC138808, NCOA2, NCoA-2, TIF2
NCOA4	nuclear receptor coactivator 4 - PTC3 (ELE1)	8031	10	10q11.2	T	8031, ARA70, CCDS7237.1, DKFZp762E1112, ELE1, ENSG00000138293, NCOA4, PTC3, Q13772, Q5T1E8, RFG, RP11-481A12_4
NDRG1	N-myc downstream regulated 1	10397	8	8q24.3	T	10397, CAP43, CCDS34945.1, CMT4D, DRG1, ENSG00000104419, GC4, HMSNL, NDR1, NDRG1, NMSL, PROXY1, Q53EU7, Q597H1, Q6IBG2, Q92597, Q9BRH7, RIT42, RTP, TARG1, TDD5
NF1	neurofibromatosis type 1 gene	4763	17	17q12	D, Mis, N, F, S, O	4763, ENSG00000196712, NF1, NFNS, P21359, Q14931, Q4W6X4, Q7Z3J5, Q9UMU3
NF2	neurofibromatosis type 2 gene	4771	22	22q12.2	D, Mis, N, F, S, O	4771, ACN, BANF, CCDS13861.1, ENSG00000186575, Merlin, NF2, P35240, Q9NRW8, SCH
NFE2L2	nuclear factor (erythroid-derived 2)-like 2 (NRF2)	4780	2	2q31	Mis	4780, CCDS42782.1, ENSG00000116044, NFE2L2, NRF2, Q16236, Q9BZF8
NFIB	nuclear factor I/B	4781	9	9p24.1	T	4781, CCDS6474.1, ENSG00000147862, NFI-RED, NFIB, NFIB2, NFIB3, NFIB_ENST00000397581, Q5VW26, RP11-280O24_2
NFKB2	nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100)	4791	10	10q24	T	4791, A8K9D9, CCDS41565.1, ENSG00000077150, LYT-10, LYT10, NFKB2
NIN	ninein (GSK3B interacting protein)	51199	14	14q24	T	51199, CCDS32078.1, ENSG00000100503, KIAA1565, NIN
NKX2-1	NK2 homeobox 1	7080	14	14q13	A	7080, BCH, BHC, CCDS9659.1, ENSG00000136352, NK-2, NKX2-1, NKX2A, NKX2_1, O14956, P43699, Q7KZF6, TEBP, TITF1, TTF-1, TTF1
NONO	non-POU domain containing, octamer-binding	4841	X	Xq13.1	T	4841, CCDS14410.1, ENSG00000147140, NMT55, NONO, NRB54, P54, P54NRB, Q15233
NOTCH1	Notch homolog 1, translocation-associated (Drosophila) (TAN1)	4851	9	9q34.3	T, Mis, O	4851, ENSG00000148400, NOTCH1, P46531, Q59ED8, Q5SXM3, TAN1, hN1
NOTCH2	Notch homolog 2	4853	1	1p13-p11	N, F, Mis	4853, AGS2, CCDS908.1, ENSG00000134250, NOTCH2, Q04721, Q13560, Q5VTD0, Q6IQ50, Q96JU8, Q9UFD5, hN2
NPM1	nucleophosmin (nucleolar phosphoprotein B23, numatrin)	4869	5	5q35	T, F	4869, B23, CCDS4376.1, ENSG00000181163, MGC104254, NPM, NPM1, P06748
NR4A3	nuclear receptor subfamily 4, group A, member 3 (NOR1)	8013	9	9q22	T	8013, A2A3I7, CCDS6742.1, CHN, CSMF, ENSG00000119508, MINOR, NOR1, NR4A3, Q92570, TEC
NRAS	neuroblastoma RAS viral (v-ras) oncogene homolog	4893	1	1p13.2	Mis	4893, ENSG00000213281, N-ras, NRAS, NRAS1, P01111
NSD1	nuclear receptor binding SET domain protein 1	64324	5	5q35	T	64324, ARA267, CCDS4412.1, DKFZp666C163, ENSG00000165671, FLJ22263, FLJ44628, NSD1, Q658U6, Q8NB95, Q96DQ7, Q96L73, Q96MN8, Q9H6B5, Q9H6H8, SOTOS, STO
NTRK1	neurotrophic tyrosine kinase, receptor, type 1	4914	1	1q21-q22	T	4914, CCDS1161.1, DKFZp781I14186, ENSG00000198400, MTC, NTRK1, P04629, TRK, TRK1, TRKA, p140-TrkA
NTRK3	neurotrophic tyrosine kinase, receptor, type 3	4916	15	15q25	T	4916, CCDS10340.1, ENSG00000140538, NTRK3, Q16288, TRKC, gp145(trkC)
NUMA1	nuclear mitotic apparatus protein 1	4926	11	11q13	T	4926, CCDS31633.1, ENSG00000137497, NUMA, NUMA1, Q14980, Q3SYK8, Q4LE64, Q86XH4, Q9UNL7, Q9UPG3
NUP214	nucleoporin 214kDa (CAN)	8021	9	9q34.1	T	8021, CAIN, CAN, CCDS6940.1, D9S46E, ENSG00000126883, MGC104525, N214, NUP214, P35658, Q3KQZ0, Q5JUP7, Q5JUP9, Q75R47, Q7Z3C4, Q86XD3, RP11-544A12_7
NUP98	nucleoporin 98kDa	4928	11	11p15	T	4928, ADIR2, CCDS7746.1, ENSG00000110713, NUP196, NUP98
OLIG2	oligodendrocyte lineage transcription factor 2 (BHLHB1)	10215	21	21q22.11	T	10215, BHLHB1, CCDS13620.1, ENSG00000205927, OLIG2, OLIGO2, PRKCBP2, RACK17
OMD	osteomodulin	4958	9	9q22.31	T	4958, CCDS6696.1, ENSG00000127083, OMD, Q5TBF4, Q99983, SLRR2C, osteoadherin
P2RY8	purinergic receptor P2Y, G-protein coupled, 8	286530	X,Y	Xp22.3; Yp11.3	T	286530, CCDS14115.1, ENSG00000182162, MGC50878, P2RY8, P2Y8, Q86VZ1, RP11-261P4_4
PAFAH1B2	platelet-activating factor acetylhydrolase, isoform Ib, beta subunit 30kDa	5049	11	11q23	T	5049, CCDS8380.1, ENSG00000168092, P68402, PAFAH1B2, Q6IBR6
PALB2	partner and localizer of BRCA2	79728	16	16p12.1	F, N, Mis	79728, ENSG00000083093, PALB2
PAX3	paired box gene 3	5077	2	2q35	T	5077, CCDS2448.1, CDHS, ENSG00000135903, HUP2, MGC120381, MGC120382, MGC120383, MGC120384, MGC134778, P23760, PAX3, Q12777, Q494Z3, Q494Z4, WS1
PAX5	paired box gene 5 (B-cell lineage specific activator protein)	5079	9	9p13	T, Mis, D, F, S	5079, BSAP, CCDS6607.1, ENSG00000196092, PAX5, Q02548, Q5VVI9
PAX7	paired box gene 7	5081	1	1p36.2-p36.12	T	5081, CCDS186.1, ENSG00000009709, HUP1, P23759, PAX7, PAX7B, Q0VA99, Q2PJS5
PAX8	paired box gene 8	7849	2	2q12-q14	T	7849, ENSG00000125618, PAX8
PBRM1	polybromo 1	55193	3	3p21	Mis, N, F, S, D, O	55193, BAF180, C9J053, C9J409, C9J9L6, C9JCJ2, C9JPI5, C9JQF1, CCDS2860, MGC156155, MGC156156, PB1, PBRM1, Q6IRX1, Q9NUX9
PBX1	pre-B-cell leukemia transcription factor 1	5087	1	1q23	T	5087, CCDS1246.1, P40424, PBX1, Q5T487, Q68DD6
PCM1	pericentriolar material 1 (PTC4)	5108	8	8p22-p21.3	T	5108, B4DWY1, B4DYD5, ENSG00000078674, PCM1, PTC4, Q15154
PCSK7	proprotein convertase subtilisin/kexin type 7	9159	11	11q23.3	T	9159, CCDS8382.1, ENSG00000160613, LPC, PC7, PC8, PCSK7, Q16549, Q3C1X1, Q53GM4, Q6PK65, Q96FK8, SPC7
PDE4DIP	phosphodiesterase 4D interacting protein (myomegalin)	9659	1	1q12	T	9659, CCDS30824.1, ENSG00000178104, PDE4DIP, Q5VU42, Q5VU43, Q5VU47, Q68DU2, Q86T40, Q8N3W0, Q9HCP3, Q9HCP4, Q9HCP5
PDGFB	platelet-derived growth factor beta polypeptide (simian sarcoma viral (v-sis) oncogene homolog)	5155	22	22q12.3-q13.1	T	5155, A2NWD3, CCDS13987.1, ENSG00000100311, FLJ12858, P01127, P78450, PDGF2, PDGFB, Q6FHE7, Q9UE56, Q9UE57, SIS, SSV, c-sis
PDGFRA	platelet-derived growth factor, alpha-receptor	5156	4	4q11-q13	Mis, O, T	5156, CCDS3495.1, CD140A, CD140a, ENSG00000134853, MGC74795, P16234, PDGFR2, PDGFRA, Rhe-PDGFRA
PDGFRB	platelet-derived growth factor receptor, beta polypeptide	5159	5	5q31-q32	T	5159, CCDS4303.1, CD140B, CD140b, ENSG00000113721, JTK12, P09619, PDGF-R-beta, PDGFR, PDGFR1, PDGFRB
PER1	period homolog 1 (Drosophila)	5187	17	17p13.1-17p12	T	5187, A2I2P6, CCDS11131.1, ENSG00000179094, O15534, PER, PER1, Q6IN51, Q8N6U1, Q9H2D0, RIGUI
PHF6	PHD finger protein 6	84295	X	Xq26.3	F, N, Splice, Mis	84295, BORJ, ENSG00000156531, MGC14797, PHF6
PHOX2B	paired-like homeobox 2b	8929	4	4p12	Mis, F	8929, PHOX2B
PICALM	phosphatidylinositol binding clathrin assembly protein (CALM)	8301	11	11q14	T	8301, CALM, CCDS8272.1, CLTH, ENSG00000073921, PICALM, Q13492, Q4LE54
PIK3CA	phosphoinositide-3-kinase, catalytic, alpha polypeptide	5290	3	3q26.3	Mis	5290, ENSG00000121879, MGC142161, MGC142163, P42336, PI3K, PIK3CA, p110-alpha
PIK3R1	phosphoinositide-3-kinase, regulatory subunit 1 (alpha)	5295	5	5q13.1	Mis, F, O	5295, CCDS3993.1, CCDS3995.1, ENSG00000145675, GRB1, P27986, PIK3R1, p85-ALPHA
PIM1	pim-1 oncogene	5292	6	6p21.2	T	5292, ENSG00000137193, P11309, PIM, PIM1
PLAG1	pleiomorphic adenoma gene 1	5324	8	8q12	T	5324, CCDS6165.1, ENSG00000181690, PLAG1, Q59GH8, Q6DJT9, Q9Y4L2
PML	promyelocytic leukemia	5371	15	15q22	T	5371, CCDS10255.1, ENSG00000140464, MYL, PML, PP8675, RNF71, TRIM19
PMS1	PMS1 postmeiotic segregation increased 1 (S. cerevisiae)	5378	2	2q31-q33	Mis, N	5378, CCDS2302.1, DKFZp781M0253, ENSG00000064933, HNPCC3, PMS1, PMSL1, hPMS1
PMS2	PMS2 postmeiotic segregation increased 2 (S. cerevisiae)	5395	7	7p22	Mis, N, F	5395, CCDS5343.1, ENSG00000122512, HNPCC4, H_DJ0042M02_9, PMS2, PMS2CL, PMSL2
PMX1	paired mesoderm homeo box 1	5396	1	1q24	T	5396, CCDS1291.1, ENSG00000116132, PMX1, PRRX1
PNUTL1	peanut-like 1 (Drosophila)	5413	22	22q11.2	T	5413, CCDS13764.1, ENSG00000184702, H5, HCDCREL-1, O95648, PNUTL1, Q99719, SEPT5
POU2AF1	POU domain, class 2, associating factor 1 (OBF1)	5450	11	11q23.1	T	5450, BOB1, CCDS31675.1, ENSG00000110777, OBF-1, OBF1, OCAB, POU2AF1, Q16633
POU5F1	POU domain, class 5, transcription factor 1	5460	6	6p21.31	T	5460, ENSG00000230336, MGC22487, OCT3, OCT4, OTF3, OTF3C, OTF3P1, OTF4, Oct4, POU5F1, POU5F1P1
PPARG	peroxisome proliferative activated receptor, gamma	5468	3	3p25	T	5468, CCDS2609.1, ENSG00000132170, HUMPPARG, NR1C3, PPARG, PPARG1, PPARG2
PPP2R1A	protein phosphatase 2, regulatory subunit A, alpha	5518	19	19q13.41	Mis	5518, CCDS12849.1, ENSG00000105568, MGC786, P30153, PPP2R1A, PR65A, Q6ICQ3, Q96DH3
PRCC	papillary renal cell carcinoma (translocation-associated)	5546	1	1q21.1	T	5546, CCDS1157, CCDS1158.1, ENSG00000143294, MGC17178, MGC4723, PRCC, PRCC_ENST00000353233, Q5SZ06, Q92733, Q96FT4, RCCP1, TPRC
PRDM1	PR domain containing 1, with ZNF domain	639	6	6q21	D, N, Mis, F, S	639, BLIMP1, CCDS5054, ENSG00000057657, MGC118922, MGC118923, MGC118924, MGC118925, O75626, PRDI-BF1, PRDM1, Q5T4E8, Q658W0, RP1-134E15_1
PRDM16	PR domain containing 16	63976	1	1p36.23-p33	T	63976, ENSG00000142611, KIAA1675, MEL1, PFM13, PRDM16, Q5VU54, Q9HAZ2
PRF1	perforin 1 (pore forming protein)	5551	10	10q22	M	5551, CCDS7305.1, ENSG00000180644, FLH2, HPLH2, MGC65093, P1, P14222, PFP, PRF1, Q59F57
PRKAR1A	protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1)	5573	17	17q23-q24	T, Mis, N, F, S	5573, CAR, CCDS11678.1, CNC, CNC1, DKFZp779L0468, ENSG00000108946, MGC17251, P10644, PKR1, PPNAD1, PRKAR1, PRKAR1A, Q68DQ4, Q96P62, TSE1
PRO1073	PRO1073 protein (ALPHA)	29005	11	11q31.1	T	29005, PRO1073, Q9UHZ2
PSIP2	PC4 and SFRS1 interacting protein 2 (LEDGF)	11168	9	9p22.2	T	11168, CCDS6480.1, ENSG00000164985, PSIP1, PSIP2, Q05CM9, Q8N4N4
PTCH	Homolog of Drosophila Patched gene	5727	9	9q22.3	Mis, N, F, S	5727, BCNS, CCDS6714.1, ENSG00000185920, FLJ26746, FLJ42602, HPE7, NBCCS, PTC, PTC1, PTCH, PTCH1, Q13635, Q59FG5, Q5R1U7, Q5R1V0, Q5VZC2, Q6TKP8, Q6TKP9, Q6TKQ0, Q86XG7, RP11-435O5_3
PTEN	phosphatase and tensin homolog gene	5728	10	10q23.3	D, Mis, N, F, S	5728, BZS, ENSG00000171862, MGC11227, MHAM, MMAC1, P60484, PTEN, PTEN1, TEP1
PTPN11	protein tyrosine phosphatase, non-receptor type 11	5781	12	12q24.1	Mis	5781, BPTP3, CCDS9163.1, CFC, ENSG00000179295, MGC14433, NS1, PTP-1D, PTP2C, PTPN11, Q06124, Q16344, SH-PTP2, SH-PTP3, SHP-2, SHP2
RAB5EP	rabaptin, RAB GTPase binding effector protein 1 (RABPT5)	9135	17	17p13	T	9135, ENSG00000029725, Q05BX6, Q15276, RAB5EP, RABEP1, RABPT5, neurocrescin, rabaptin-5
RAD51L1	RAD51-like 1 (S. cerevisiae) (RAD51B)	5890	14	14q23-q24.2	T	5890, CCDS9789.1, ENSG00000182185, MGC34245, O15315, R51H2, RAD51B, RAD51L1, REC2, hREC2
RAF1	v-raf-1 murine leukemia viral oncogene homolog 1	5894	3	3p25	T	5894, CCDS2612.1, CRAF, ENSG00000132155, P04049, RAF1, Raf-1, c-Raf
RALGDS	ral guanine nucleotide dissociation stimulator	5900	9	9q34.3	T	5900, CCDS6959.1, ENSG00000160271, FLJ20922, Q12967, Q5T7V4, Q6ZSD5, Q8N4Y1, Q8NF31, Q8WU11, Q9HAX8, Q9HAX9, Q9HAY0, RALGDS, RGF, RalGEF
RANBP17	RAN binding protein 17	64901	5	5q34	T	64901, CCDS34287.1, ENSG00000204764, FLJ32916, Q546R4, Q8IU74, Q8IVM9, Q96M10, Q9H2T7, RANBP17
RAP1GDS1	RAP1, GTP-GDP dissociation stimulator 1	5910	4	4q21-q25	T	5910, ENSG00000138698, GDS1, MGC118859, MGC118861, P52306, Q4QQI8, Q9BUX6, RAP1GDS1
RARA	retinoic acid receptor, alpha	5914	17	17q12	T	5914, CCDS11366.1, ENSG00000131759, NR1B1, RAR, RARA
RB1	retinoblastoma gene	5925	13	13q14	D, Mis, N, F, S	5925, ENSG00000139687, OSRC, P06400, RB, RB1
RBM15	RNA binding motif protein 15	64783	1	1p13	T	64783, A1A693, CCDS822.1, ENSG00000162775, OTT, OTT1, Q59EY1, Q96T37, RBM15
RECQL4	RecQ protein-like 4	9401	8	8q24.3	N, F, S	9401, ENSG00000160957, RECQ4, RECQL4, RTS, RecQ4
REL	v-rel reticuloendotheliosis viral oncogene homolog (avian)	5966	2	2p13-p12	A	5966, C-Rel, CCDS1864.1, ENSG00000162924, I-Rel, REL
RET	ret proto-oncogene	5979	10	10q11.2	T, Mis, N, F	5979, CCDS7200.1, CDHF12, ENSG00000165731, HSCR1, MEN2A, MEN2B, MTC1, P07949, PTC, RET, RET-ELE1, RET51
ROS1	v-ros UR2 sarcoma virus oncogene homolog 1 (avian)	6098	6	6q22	T	6098, ENSG00000047936, MCF3, P08922, ROS, ROS1, RP1-179P9_1
RPL22	ribosomal protein L22 (EAP)	6146	1	1p36.31	T	6146, CCDS58.1, EAP, RPL22
RPN1	ribophorin I	6184	3	3q21.3-q25.2	T	6184, CCDS3051.1, ENSG00000163902, OST1, P04843, Q53EP4, Q68DT1, Q6IBR0, Q96HX3, RPN1
RUNDC2A	RUN domain containing 2A	84127	16	16p13.13	T	84127, CCDS10553.1, ENSG00000140660, FLJ12363, Q9HA26, RUNDC2A
RUNX1	runt-related transcription factor 1 (AML1)	861	21	21q22.3	T	861, AML1, AMLCR1, CBFA2, CCDS13639.1, ENSG00000159216, PEBP2A2, Q01196, RUNX1
RUNXBP2	runt-related transcription factor binding protein 2 (MOZ/ZNF220)	7994	8	8p11	T	7994, CCDS6124.1, ENSG00000083168, MOZ, MYST3, Q92794, RUNXBP2, ZNF220
SBDS	Shwachman-Bodian-Diamond syndrome protein	51119	7	7q11	Gene Conversion	51119, CCDS5537.1, CGI-97, ENSG00000126524, FLJ10917, Q9Y3A5, SBDS, SDS, SWDS
SDC4	syndecan 4	6385	20	20q12	T	6385, CCDS13350.1, ENSG00000124145, MGC22217, P31431, Q53FN9, Q6FGN3, SDC4, SYND4
SDH5	chromosome 11 open reading frame 79	54949	11	11q12.2	M	54949, C11orf79, CCDS8007.1, ENSG00000167985, FLJ20487, Q9NX18, SDH5, SDHAF2
SDHB	succinate dehydrogenase complex, subunit B, iron sulfur (Ip)	6390	1	1p36.1-p35	Mis, N, F	6390, CCDS176.1, ENSG00000117118, IP, PGL4, SDH, SDH1, SDHB, SDHIP
SDHC	succinate dehydrogenase complex, subunit C, integral membrane protein, 15kDa	6391	1	1q21	Mis, N, F	6391, CYB560, CYBL, ENSG00000143252, PGL3, QPS1, SDH3, SDHC
SDHD	succinate dehydrogenase complex, subunit D, integral membrane protein	6392	11	11q23	Mis, N, F, S	6392, CBT1, CCDS31678.1, ENSG00000204370, O14521, PGL, PGL1, Q53XW5, SDH4, SDHD
SEPT6	septin 6	23157	X	Xq24	T	23157, CCDS14584.1, ENSG00000125354, KIAA0128, MGC16619, MGC20339, Q14141, Q5JTK3, Q6B514, Q6NT82, Q8NFH9, RP5-876A24_2, SEP2, SEPT2, SEPT6
SET	SET translocation	6418	9	9q34	T	2PP2A, 6418, CCDS6907.1, ENSG00000119335, ENSG00000181555, I2PP2A, IGAAD, PHAPII, SET, SETD2, SETD2_ENST00000409792, TAF-IBETA
SETD2	SET domain containing 2	29072	3	3p21.31	N, F, S, Mis	29072, ENSG00000181555, SETD2
SF3B1	splicing factor 3b, subunit 1, 155kDa	23451	2	2q33.1	Mis	23451, A0JLT9, A0PJH5, CCDS33356.1, ENSG00000115524, O75533, PRP10, PRPF10, Q32Q20, Q7Z497, Q9NTB4, SAP155, SF3B1, SF3b155
SFPQ	splicing factor proline/glutamine rich(polypyrimidine tract binding protein associated)	6421	1	1p34.3	T	6421, CCDS388.1, ENSG00000116560, P23246, PSF, Q5SZ71, Q6PIX2, Q86VG2, Q9BSV4, SFPQ
SFRS3	splicing factor, arginine/serine-rich 3	6428	6	6p21	T	6428, CCDS4823.1, ENSG00000112081, P84103, Q5R3K0, SFRS3, SRSF3, SRp20
SH3GL1	SH3-domain GRB2-like 1 (EEN)	6455	19	19p13.3	T	6455, CCDS32874.1, CNSA1, EEN, ENSG00000141985, Q6FGM0, Q99961, Q9BVL7, Q9BWP4, Q9UQD4, SH3D2B, SH3GL1, SH3P8
SIL	TAL1 (SCL) interrupting locus	6491	1	1p32	T	6491, CCDS548.1, ENSG00000123473, Q15468, Q5T0C6, Q5T0C9, Q5T0D0, SIL, STIL
SLC34A2	solute carrier family 34 (sodium phosphate), member 2	10568	4	4p15.2	T	10568, CCDS3435.1, ENSG00000157765, FLJ90534, NAPI-3B, NAPI-IIb, NPTIIb, O95436, SLC34A2
SLC45A3	solute carrier family 45, member 3	85414	1	1q32	T	85414, CCDS1458.1, ENSG00000158715, IPCA-6, IPCA6, PCANAP6, PRST, Q658X7, Q96JT2, SLC45A3
SMARCA4	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	6597	19	19p13.2	F, N, Mis	6597, BAF190, BRG1, CCDS12253.1, ENSG00000127616, FLJ39786, P51532, Q59FZ6, SMARCA4, SNF2, SNF2-BETA, SNF2L4, SNF2LB, SWI2, hSNF2b
SMARCB1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1	6598	22	22q11	D, N, F, S	6598, BAF47, CCDS13817.1, ENSG00000099956, INI1, Ini1, Q12824, RDT, SMARCB1, SNF5, SNF5L1, Sfh1p, Snr1, hSNFS
SMO	smoothened homolog (Drosophila)	6608	7	7q31-q32	Mis	6608, CCDS5811.1, ENSG00000128602, Gx, NP_005622, Q99835, Q9Y2Y5, SMO, SMOH
SOCS1	suppressor of cytokine signaling 1?	8651	16	16p13.13	F, O	8651, CCDS10546.1, CIS1, CISH1, Cish1, ENSG00000185338, JAB, O15524, Q4JHT5, SOCS-1, SOCS1, SSI-1, SSI1, TIP3
SOX2	SRY (sex determining region Y)-box 2	6657	3	3q26.3-q27	A	6657, ANOP3, CCDS3239.1, ENSG00000181449, MCOPS3, MGC2413, P48431, Q9UD89, SOX2
SRGAP3	SLIT-ROBO Rho GTPase activating protein 3	9901	3	3p25.3	T	9901, ARHGAP14, CCDS2572.1, ENSG00000196220, KIAA0411, MEGAP, SRGAP2, SRGAP3, WRP
SRSF2	serine/arginine-rich splicing factor 2	6427	17	17q25	Mis	6427, CCDS11749.1, Q01130, Q53FN0, SFRS2, SRSF2
SS18	synovial sarcoma translocation, chromosome 18	6760	18	18q11.2	T	6760, CCDS32807.1, ENSG00000141380, Q15532, Q4VAX2, Q8TDQ9, SS18, SSXT, SYT
SS18L1	synovial sarcoma translocation gene on chromosome 18-like 1	26039	20	20q13.3	T	26039, CCDS13491.1, ENSG00000184402, KIAA0693, O75177, Q6MZV9, Q6XYD9, SS18L1
SSH3BP1	spectrin SH3 domain binding protein 1	10006	10	10p11.2	T	10006, ABI-1, ABI1, CCDS7150.1, E3B1, SSH3BP1
SSX1	synovial sarcoma, X breakpoint 1	6756	X	Xp11.23-p11.22	T	6756, CCDS14290.1, ENSG00000126752, MGC150425, MGC5162, Q16384, RP11-552E4_1, SSRC, SSX1
SSX2	synovial sarcoma, X breakpoint 2	6757	X	Xp11.23-p11.22	T	6757, CCDS14345.1, ENSG00000157950, HD21, HOM-MEL-40, MGC119055, MGC15364, MGC3884, Q8WWZ9, Q9NZK4, RP11-552J9_2, SSX, SSX2
SSX4	synovial sarcoma, X breakpoint 4	6759	X	Xp11.23	T	6759, CCDS35240.1, ENSG00000204645, MGC119056, MGC12411, O60224, SSX4
STK11	serine/threonine kinase 11 gene (LKB1)	6794	19	19p13.3	D, Mis, N, F, S	6794, ENSG00000118046, LKB1, PJS, Q15831, STK11
STL	Six-twelve leukemia gene	7955	6	6q23	T
SUFU	suppressor of fused homolog (Drosophila)	51684	10	10q24.32	D, F, S	51684, CCDS7537.1, ENSG00000121410, PRO1280, Q5JSM1, Q5JWB5, Q9UMX1, RP11-47A8_1, SUFU, SUFUH, SUFUXL
SUZ12	suppressor of zeste 12 homolog (Drosophila)	23512	17	17q11.2	T	23512, CCDS11270.1, CHET9, ENSG00000178691, JJAZ1, KIAA0160, Q15022, SUZ12
SYK	spleen tyrosine kinase	6850	9	9q22	T	6850, CCDS6688.1, ENSG00000165025, P43405, SYK
TAF15	TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa	8148	17	17q11.1-q11.2	T	8148, CCDS32623.1, ENSG00000172660, Npl3, Q86X94, Q92804, RBP56, TAF15, TAF2N, hTAFII68
TAL1	T-cell acute lymphocytic leukemia 1 (SCL)	6886	1	1p32	T	6886, CCDS547.1, ENSG00000162367, P17542, Q16509, Q9UE36, SCL, TAL1, TCL5, tal-1
TAL2	T-cell acute lymphocytic leukemia 2	6887	9	9q31	T	6887, CCDS6767.1, Q16559, TAL2
TCEA1	transcription elongation factor A (SII), 1	6917	8	8q11.2	T	6917, ENSG00000187735, TCEA1
TCF1	transcription factor 1, hepatic (HNF1)	6927	12	12q24.2	Mis, F	6927, CCDS9209.1, ENSG00000135100, HNF1, HNF1A, LFB1, MODY3, P20823, TCF1
TCF12	transcription factor 12 (HTF4, helix-loop-helix transcription factors 4)	6938	15	15q21	T	6938, CCDS10160.1, ENSG00000140262, HEB, HTF4, HsT17266, Q86VM2, Q9NQY1, Q9NQY2, Q9NQY3, Q9NQY4, Q9NQY5, Q9NQY6, Q9NQY7, Q9NQY9, TCF12
TCF3	transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)	6929	19	19p13.3	T	6929, CCDS12074.1, E2A, ENSG00000071564, ITF1, MGC129647, MGC129648, P15923, Q6PJU3, TCF3
TCF7L2	transcription factor 7-like 2	6934	10	10q25.3	T	6934, CCDS7576.1, ENSG00000148737, Q6FHW4, TCF-4, TCF4, TCF7L2
TCL1A	T-cell leukemia/lymphoma 1A	8115	14	14q32.1	T	8115, CCDS9941.1, ENSG00000100721, P56279, TCL1, TCL1A
TCL6	T-cell leukemia/lymphoma 6	27004	14	14q32.1	T	27004, CCDS9940.1, ENSG00000187621, P56847, Q9NPH1, TCL6
TET2	tet oncogene family member 2	54790	4	4q24	Mis N, F	54790, A7E237, B5MDU0, C3W8F4, ENSG00000168769, FLJ20032, KIAA1546, MGC125715, Q6N021, TET2, TET2-202
TFE3	transcription factor binding to IGHM enhancer 3	7030	X	Xp11.22	T	7030, CCDS14315.2, ENSG00000068323, RCCP2, TFE3, TFEA
TFEB	transcription factor EB	7942	6	6p21	T	7942, AlphaTFEB, CCDS4858.1, ENSG00000112561, P19484, Q4VXW8, Q4VXX0, Q5QPI1, Q5QPI2, Q709A5, Q709A8, Q709A9, Q86WB1, TCFEB, TFEB
TFG	TRK-fused gene	10342	3	3q11-q12	T	10342, CCDS2939.1, ENSG00000114354, Q7Z426, Q7Z427, Q92734, Q969I2, TF6, TFG
TFPT	TCF3 (E2A) fusion partner (in childhood Leukemia)	29844	19	19q13	T	29844, CCDS12878.1, ENSG00000105619, P0C1Z6, TFPT
TFRC	transferrin receptor (p90, CD71)	7037	3	3q29	T	7037, CCDS3312.1, CD71, ENSG00000072274, P02786, Q1HE24, TFR1, TFRC
THRAP3	thyroid hormone receptor associated protein 3 (TRAP150)	9967	1	1p34.3	T	9967, CCDS405.1, ENSG00000054118, FLJ22082, MGC133082, MGC133083, Q05D20, Q6P0P7, Q6PJV4, Q7Z5U1, Q9Y2W1, THRAP3, TRAP150
TIF1	transcriptional intermediary factor 1 (PTC6,TIF1A)	8805	7	7q32-q34	T	8805, CCDS5847.1, ENSG00000122779, P04720, PTC6, RNF82, TF1A, TIF1, TIF1A, TIF1ALPHA, TRIM24, Tif1a, hTIF1
TLX1	T-cell leukemia, homeobox 1 (HOX11)	3195	10	10q24	T	3195, A1L4G3, CCDS7510.1, ENSG00000107807, HOX11, P31314, Q5VXP2, Q9UD59, TCL3, TLX1
TLX3	T-cell leukemia, homeobox 3 (HOX11L2)	30012	5	5q35.1	T	30012, CCDS34288.1, ENSG00000164438, HOX11L2, O43711, RNX, TLX3
TMPRSS2	transmembrane protease, serine 2	7113	21	21q22.3	T	7113, CCDS33564.1, ENSG00000184012, O15393, PRSS10, Q96T73, TMPRSS2
TNFAIP3	tumor necrosis factor, alpha-induced protein 3	7128	6	6q23	D, N, F	7128, A20, CCDS5187.1, ENSG00000118503, MGC104522, MGC138687, MGC138688, OTUD7C, P21580, Q5PY18, Q5VXQ8, Q5VXQ9, Q5VXR0, TNFA1P2, TNFAIP3
TNFRSF14	tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator)	8764	1	1p36.32	Mis, N, F	8764, ATAR, CCDS43.1, ENSG00000157873, HVEA, HVEM, LIGHTR, Q6IB95, Q8N634, Q92956, TNFRSF14, TR2
TNFRSF17	tumor necrosis factor receptor superfamily, member 17	608	16	16p13.1	T	608, BCM, BCMA, CCDS10552.1, CD269, ENSG00000048462, Q02223, Q6PE46, TNFRSF17
TNFRSF6	tumor necrosis factor receptor superfamily, member 6 (FAS)	355	10	10q24.1	Mis	355, ALPS1A, APO-1, APT1, CCDS7393.1, CD95, ENSG00000026103, FAS, FAS1, FASTM, P25445, Q5T9P1, Q6ICT6, Q8IUB6, Q8IUB7, TNFRSF6
TOP1	topoisomerase (DNA) I	7150	20	20q12-q13.1	T	7150, CCDS13312.1, ENSG00000198900, P11387, Q6NWZ5, Q6PK95, Q9BVT2, RP3-511B24_2, TOP1, TOPI
TP53	tumor protein p53	7157	17	17p13	Mis, N, F	7157, CCDS11118.1, ENSG00000141510, LFS1, P04637, P53, TP53, TRP53, p53
TPM3	tropomyosin 3	7170	1	1q22-q23	T	7170, CCDS1060.1, ENSG00000143549, TPM3
TPM4	tropomyosin 4	7171	19	19p13.1	T	7171, CCDS12338.1, ENSG00000167460, P67936, Q5U0D9, TPM4
TPR	translocated promoter region	7175	1	1q25	T	7175, A0PJC9, P12270, TPR
TRA@	T cell receptor alpha locus	6955	14	14q11.2	T
TRB@	T cell receptor beta locus	6957	7	7q35	T
TRD@	T cell receptor delta locus	6964	14	14q11	T
TRIM27	tripartite motif-containing 27	5987	6	6p22	T	5987, CCDS4654.1, DASS-46L4_6, ENSG00000234495, RFP, RNF76, TRIM27
TRIM33	tripartite motif-containing 33 (PTC7,TIF1G)	51592	1	1p13	T	51592, ENSG00000197323, FLJ32925, PTC7, Q9UPN9, RFG7, TF1G, TIF1G, TIF1GAMMA, TIFGAMMA, TRIM33
TRIP11	thyroid hormone receptor interactor 11	9321	14	14q31-q32	T	9321, CCDS9899.1, CEV14, ENSG00000100815, Q15643, Q6MZL5, TRIP11, Trip230
TSC1	tuberous sclerosis 1 gene	7248	9	9q34	D, Mis, N, F, S	7248, ENSG00000165699, KIAA0243, LAM, MGC86987, TSC, TSC1, hamartin
TSC2	tuberous sclerosis 2 gene	7249	16	16p13.3	D, Mis, N, F, S	7249, CCDS10458.1, ENSG00000103197, FLJ43106, LAM, TSC2, TSC4, tuberin
TSHR	thyroid stimulating hormone receptor	7253	14	14q31	Mis	7253, CCDS9872.1, ENSG00000165409, LGR3, MGC75129, TSHR, hTSHR-I
TTL	tubulin tyrosine ligase	150465	2	2q13	T	150465, 2410003M22Rik, 284076, CCDS2096.1, ENSG00000114999, ENSG00000170703, FLJ35808, MGC46235, Q585T3, Q8N841, Q8NG68, TTL, TTLL6_ENST00000393382, TTL_6
U2AF1	U2 small nuclear RNA auxiliary factor 1	7307	21	21q22.3	Mis	7307, CCDS13694.1, DKFZp313J1712, ENSG00000160201, FP793, Q01081, Q71RF1, Q7Z780, RN, RNU2AF1, U2AF1, U2AF35, U2AFBP
USP6	ubiquitin specific peptidase 6 (Tre-2 oncogene)	9098	17	17p13	T	9098, ENSG00000129204, HRP1, TRE17, TRE2, Tre-2, USP6
VHL	von Hippel-Lindau syndrome gene	7428	3	3p25	D, Mis, N, F, S	7428, A0PJF6, CCDS2597.1, ENSG00000134086, HRCA1, P40337, RCA1, VHL, VHL1
VTI1A	vesicle transport through interaction with t-SNAREs homolog 1A	143187	10	10q25.2	T	143187, CCDS7575.2, ENSG00000151532, MVti1, Q5W0D7, VTI1A, Vti1-rp2
WAS	Wiskott-Aldrich syndrome	7454	X	Xp11.23-p11.22	Mis, N, F, S	7454, CCDS14303.1, ENSG00000015285, IMD2, P42768, THC, WAS, WASP
WHSC1	Wolf-Hirschhorn syndrome candidate 1(MMSET)	7468	4	4p16.3	T	7468, B3VCH6, CCDS33940, D3DVQ2, FLJ23286, KIAA1090, MGC176638, MMSET, NSD2, O96028, REIIBP, TRX5, WHS, WHSC1, WHSC1_ENST00000382891
WHSC1L1	Wolf-Hirschhorn syndrome candidate 1-like 1 (NSD3)	54904	8	8p12	T	54904, CCDS6105.1, ENSG00000147548, WHSC1L1
WIF1	WNT inhibitory factor 1	11197	12	12q14.3	T	11197, CCDS8971.1, ENSG00000156076, WIF-1, WIF1
WRN	Werner syndrome (RECQL2)	7486	8	8p12-p11.2	Mis, N, F, S	7486, A1KYY9, CCDS6082.1, ENSG00000165392, Q14191, Q59F09, RECQ3, RECQL2, WRN
WT1	Wilms tumour 1 gene	7490	11	11p13	D, Mis, N, F, S	7490, ENSG00000184937, GUD, WAGR, WIT-2, WT1, WT33
WTX	family with sequence similarity 123B (FAM123B)	139285	X	Xq11.1	F, D, N, Mis	139285, CCDS14377.1, ENSG00000184675, FAM123B, FLJ39827, RP11-403E24_2, WTX
WWTR1	WW domain containing transcription regulator 1	607392	3	3q23-q24	T	25937, CCDS3144.1, DKFZP586I1419, ENSG00000018408, Q9GZV5, TAZ, WWTR1
XPA	xeroderma pigmentosum, complementation group A	7507	9	9q22.3	Mis, N, F, S	7507, CCDS6729.1, ENSG00000136936, P23025, Q5T1U9, Q6LD02, XP1, XPA, XPAC
XPC	xeroderma pigmentosum, complementation group C	7508	3	3p25	Mis, N, F, S	7508, ENSG00000154767, XP3, XPC, XPCC
XPO1	exportin 1 (CRM1 homolog, yeast)	7514	2	2p15	Mis	7514, CCDS33205.1, CRM1, DKFZp686B1823, ENSG00000082898, O14980, XPO1
YWHAE	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide (14-3-3 epsilon)	7531	17	17p13.3	T	14-3-3 epsilon, 14-3-3E, 7531, CCDS11001.1, ENSG00000108953, FLJ45465, KCIP-1, MDCR, MDS, P62258, Q4VJB6, Q53XZ5, YWHAE
ZNF145	zinc finger protein 145 (PLZF)	7704	11	11q23.1	T	7704, CCDS8367.1, ENSG00000109906, PLZF, Q05516, Q59H43, Q71UL5, Q71UL6, Q71UL7, ZBTB16, ZNF145
ZNF198	zinc finger protein 198	7750	13	13q11-q12	T	7750, ENSG00000121741, FIM, MYM, Q5W0Q3, Q9UBW7, RAMP, ZMYM2, ZNF198
ZNF278	zinc finger protein 278 (ZSG)	23598	22	22q12-q14	T	23598, CCDS13896.1, ENSG00000100105, PATZ1, Q9HD72, ZNF278
ZNF331	zinc finger protein 331	55422	19	19q13.3-q13.4	T	55422, CCDS33102.1, ENSG00000130844, Q68D63, Q6PK05, Q71QC3, Q71QC4, Q71QC5, Q71QC6, Q71QC8, Q71QC9, Q8NBU2, Q9NQX6, RITA, ZNF331, ZNF361, ZNF463
ZNF384	zinc finger protein 384 (CIZ/NMP4)	171017	12	12p13	T	171017, CCDS8557.1, ENSG00000126746, ZNF384
ZNF521	zinc finger protein 521	25925	18	18q11.2	T	25925, CCDS32806.1, DKFZp564D0764, EHZF, ENSG00000198795, Evi3, MGC142182, MGC142208, Q8IXI0, Q8IYZ2, Q8TES6, Q96K83, Q9C065, Q9HAL5, Q9UFK4, ZNF521
ZNF9	zinc finger protein 9 (a cellular retroviral nucleic acid binding protein)	7555	3	3q21	T	7555, CCDS3056.1, CNBP, DM2, ENSG00000169714, P62633, Q4JGY0, Q4JGY1, Q5U0E9, Q6T598, RNF163, ZNF9
ZRSR2	zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2	8233	X	Xp22.1	F, S, Mis	8233, ENSG00000169249, MGC142014, MGC142040, U2AF1-RS2, U2AF1L2, U2AF1RS2, URP, ZRSR2

A, amplification; AEL, acute eosinophilic leukemia; AL, acute leukemia; ALCL, anaplastic large-cell lymphoma; ALL, acute lymphocytic leukemia; AML, acute myelogenous leukemia; AML*, acute myelogenous leukemia (primarily treatment associated); APL, acute promyelocytic leukemia; B-ALL, B-cell acute lymphocytic leukaemia; B-CLL, B-cell Lymphocytic leukemia; B-NHL, B-cell Non-Hodgkin Lymphoma; CLL, chronic lymphatic leukemia; CML, chronic myeloid leukemia; CMML, chronic myelomonocytic leukemia; CNS, central nervous system; D, large deletion; DFSP, dermatofibrosarcoma protuberans; DLBL, diffuse large B-cell lymphoma; DLCL, diffuse large-cell lymphoma; Dom, dominant; E, epithelial; F, frameshift; GIST, gastrointestinal stromal tumour; JMML, juvenile myelomonocytic leukemia; L, leukaemia/lymphoma; M, mesenchymal; MALT, mucosa-associated lymphoid tissue lymphoma; MDS, myelodysplastic syndrome; Mis, Missense; MLCLS, mediastinal large cell lymphoma with sclerosis; MM, multiple myeloma; MPD, Myeloproliferative disorder; N, nonsense; NHL, non-Hodgkin lymphoma; NK/T, natural killer T cell; NSCLC, non small cell lung cancer; O, other; PMBL, primary mediastinal B-cell lymphoma; pre-B All, pre-B-cell acute lymphoblastic leukaemia; Rec, recesive; S, splice site; T, translocation; T-ALL, T-cell acute lymphoblastic leukemia; T-CLL, T-cell chronic lymphocytic leukaemia; TGCT, testicular germ cell tumour; T-PLL, T cell prolymphocytic leukaemia;