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Fission Yeast GO slim terms
GO slim

"GO slims" are sets of Gene Ontology (GO) terms which provide a broad overview of the annotation distribution. 'Slims' are useful to provide an overview of a genome, or an experiment. This slim set gives almost complete coverage of gene products annotated to biological process terms for fission yeast. This is a good starting point for users who wish to create a "custom slim", or to familiarize themselves with the genome contents. The totals link to the AmiGO browser to i) access the complete lists of annotated gene products ii) explore child terms and annotation to these "nodes" iii) switch filters to see annotated gene products in other organisms

Tips for using "GO slim" sets, and building user defined "slims"

GO slim terms and annotations
GO Term NameGO IDAnnotations

25/02/10

ascospore formationGO:0030437104
carbohydrate metabolic processGO:0005975244
cell adhesionGO:000715524
cell wall organization or biogenesisGO:0070882 121
cellular amino acid metabolic processGO:0006520199
cellular homeostasisGO:0019725119
cellular nitrogen compound metabolic processGO:0034641325
chromatin modificationGO:0016568213
chromosome organizationGO:0051276387
chromosome segregation GO:0007059 192
cofactor metabolic processGO:0051186 153
conjugation with cellular fusion GO:0000747109
cytokinesisGO:0000910148
cytoskeleton organizationGO:0007010222
DNA metabolic processGO:0006259 325
DNA recombinationGO:000631098
DNA repairGO:0006281 154
DNA replication GO:0006260 154
establishment or maintenance of cell polarityGO:000716362
generation of precursor metabolites and energyGO:0006091 133
lipid metabolic processGO:0006629 217
mRNA metabolic processGO:0016071220
meiosisGO:0007126176
mitochondrion organizationGO:0007005 239
nucleobase, nucleoside and nucleotide metabolic processGO:0055086150
nucleocytoplasmic transportGO:0006913 117
peroxisome organizationGO:000703122
protein amino acid glycosylationGO:000648669
protein catabolic processGO:0030163 195
protein complex assemblyGO:0006461 159
protein folding GO:000645797
protein modification by small protein conjugation or removal GO:0070647156
protein targetingGO:0006605 166
regulation of mitotic cell cycle GO:0007346 176
response to stressGO:0006950 712
ribosome biogenesisGO:0042254306
RNA metabolic processGO:0016070936
signal transduction GO:0007165374
gene specific transcription from RNA polymerase II promoterGO:0032569151
tRNA metabolic process GO:0006399 128
transcriptionGO:0006350457
translationGO:0006412 630
transmembrane transport GO:0055085324
transportGO:0006810 864
vacuole organizationGO:000703334
vesicle-mediated transport GO:0016192 302
vitamin metabolic process GO:0006766 71
other process (refers to proteins only) 31
unknown process (refers to proteins only) 834
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Last Modified Tue Mar 9 12:51:28 2010

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