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 YOGY   A resource for retrieving orthologous proteins
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Curation and Community Curation
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 Gene characterisation UPDATED 22/02/10    Progress of gene publication (protein coding) in small    scale experiments
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 Community Curation    Pilot project annotation progress
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 Priority unstudied genes UPDATED 22/02/10    Unstudied 1:1 nuclear genes conserved to human
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 GO "Slim" template UPDATED 25/02/10    Biological process GO Slim, annotation totals
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 Sequence Updates    Changes to the genome sequence since 07/03.    
 Sequence Updates, pending UPDATED 03/02/09    Pending changes, mainly from the Broad Institute,       some supported by data from other sources    
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 Gene Coordinate Changes    Changes to coordinates of individual genes since    publication
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 New and Removed genes    Genes identified or removed since publication
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 pombelist    Community mailing list
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 yeast_orthologous_groups    Mailing list for pombe/cerevisiae ortholog table    updates
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 Citing the fission yeast genome data    How to cite the fission yeast genome data

Genome News

  • December 2009

    Fission yeast is one of the 12 key organisms of the reference genomes project. The goal of this project is to completely annotate twelve reference genomes so that those annotations may be used to effectively seed the automatic annotation efforts of other genome.

  • November 2009

    GeneDB (S. pombe) now uses the latest update to Pfam, release 24.0 and 88.5% of fission yeast proteins now contain a match to at least one Pfam domain (increased from 83% in version 23). See pombelist for more information.

  • October 2009

    The fission yeast genome and annotation dataset is now available as part of Ensembl Fungi.

  • December 2008

    S. pombe GeneDB now includes "deep links" to the Biological General Repository for Interaction Datasets (BioGRID) interaction datasets from the 'Database Cross References' section of the individual Gene Pages. For further information see the pombelist archive.

  • May 2008

    Global sequence and chip study examines eukaryotic transcription
    Dynamic repertoire of the fission yeast transcriptome reveals: 94% of the genome is transcribed; extensive variation in different stages and conditions; global and condition-specific coupling between splicing efficiency and transcription; confirms the majority of introns; refines ~75 gene structures; identifies 453 new transcripts 26 of which were predicted to code for proteins. More...

  • For previous news items see the GeneDB news archive.

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Last Modified Fri Mar 12 12:13:22 2010

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