| Gene name: | Class: | Start/End: | Length: | Molecular weight: | |
|---|---|---|---|---|---|
| fadA | Rv0859 | I.A.3 | 955077 / 956285 | 1209 bp / 403 aa | 42415 Da |
| Product: | |||||
|
[beta] oxidation complex, subunit (acetyl-CoA |
|||||
| Description: | |||||
|
Rv0859, (MTV043.52), len: 403. fadA, Probable beta-ketoadipyl CoA thiolase similar to several e.g. Pseudomonasputida 4-hydroxybenzoate beta-ketoadipyl CoA thiolase PPU10895_2 (400 aa). Contains PS00098 Thiolases acyl-enzyme intermediate signature, PS00737 Thiolases signature 2 and PS00099 Thiolases active site. FASTA scores: D90777|D90777_9 (401 aa) opt: 852 z-score: 994.1 E(): 0; 44.5% identityin 422 aa overlap; and U10895|PPU10895_2 (400 aa) opt: 744 z-score: 868.7 E(): 0; 41.5% identity in 422 aa overlap. TBparse score is 0.849 |
|||||
| Translation: | |||||
MSEEAFIYEA
IRTPRGKQKN
GSLHEVKPLS
LVVGLIDELR
KRHPDLDENL
ISDVILGCVS
PVGDQGGDIA
RAAVLASGMP
VTSGGVQLNR
FCASGLEAVN
TAAQKVRSGW
DDLVLAGGVE
SMSRVPMGSD
GGAMGLDPAT
NYDVMFVPQS
IGADLIATIE
GFSREDVDAY
ALRSQQKAAE
AWSGGYFAKS
VVPVRDQNGL
LILDHDEHMR
PDTTKEGLAK
LKPAFEGLAA
LGGFDDVALQ
KYHWVEKINH
VHTGGNSSGI
VDGAALVMIG
SAAAGKLQGL
TPRARIVATA
TSGADPVIML
TGPTPATRKV
LDRAGLTVDD
IDLFELNEAF
ASVVLKFQKD
LNIPDEKLNV
NGGAIAMGHP
LGATGAMILG
TMVDELERRN
ARRALITLCI
GGGMGVATII
ERV
|
|||||
| Pfam domains present: | |||||
Not available
|
|||||
| Prosite patterns present: | |||||
PS00098 Thiolases acyl-enzyme intermediate signature
|
|||||
 |
 |
 |
 |
|
|
Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SA, UK Tel:+44 (0)1223 834244
Last Modified Wed Oct 22 16:58:45 2003
Genome Research Limited is a charity registered in England with number 1021457