- I Small-molecule metabolism
- I.A Degradation
- I.A.1 Carbon compounds [22]
- I.A.2 Amino acids and amines [18]
- I.A.3 Fatty acids [119]
- I.A.4 Phosphorous compounds [4]
- I.B Energy Metabolism
- I.B.1 Glycolysis [12]
- I.B.2 Pyruvate dehydrogenase [6]
- I.B.3 TCA cycle [19]
- I.B.4 Glyoxylate bypass [5]
- I.B.5 Pentose phosphate pathway [11]
- I.B.6 Respiration
- I.B.7 Miscellaneous oxidoreductases and oxygenases [171]
- I.B.8 ATP-proton motive force [8]
- I.C Central intermediary metabolism
- I.C.1 General [13]
- I.C.2 Gluconeogenesis [2]
- I.C.3 Sugar nucleotides [14]
- I.C.4 Amino sugars [1]
- I.C.5 Sulphur metabolism [15]
- I.D Amino acid biosynthesis
- I.D.1 Glutamate family [19]
- I.D.2 Aspartate family [21]
- I.D.3 Serine family [15]
- I.D.4 Aromatic amino acid family [15]
- I.D.5 Histidine [11]
- I.D.6 Pyruvate family [1]
- I.D.7 Branched amino acid family [13]
- I.E Polyamine synthesis [1]
- I.F Purines, pyrimidines, nucleosides and nucleotides
- I.F.1 Purine ribonucleotide biosynthesis [20]
- I.F.2 Pyrimidine ribonucleotide biosynthesis [9]
- I.F.3 2'-deoxyribonucleotide metabolism [12]
- I.F.4 Salvage of nucleosides and nucleotides [10]
- I.F.5 Miscellaneous nucleoside/nucleotide reactions [9]
- I.G Biosynthesis of cofactors, prosthetic groups and carriers
- I.G.1 Biotin [8]
- I.G.10 Thioredoxin, glutaredoxin and mycothiol [8]
- I.G.11 Menaquinone, PQQ, ubiquinone and other terpenoids [15]
- I.G.12 Heme and porphyrin [9]
- I.G.13 Cobalamin [17]
- I.G.14 Iron utilisation [6]
- I.G.2 Folic acid [11]
- I.G.3 Lipoate [2]
- I.G.4 Molybdopterin [20]
- I.G.5 Pantothenate [4]
- I.G.6 Pyridoxine [1]
- I.G.7 Pyridine nucleotide [4]
- I.G.8 Thiamine [4]
- I.G.9 Riboflavin [8]
- I.H Lipid Biosynthesis
- I.H.1 Synthesis of fatty and mycolic acids [27]
- I.H.2 Modification of fatty and mycolic acids [14]
- I.H.3 Acyltransferases, Mycoloyltransferases, and phospholipid synthesis [25]
- I.I Polyketide and non-ribosomal peptide synthesis [41]
- I.J Broad regulatory functions
- II Macromolecule metabolism
- II.A Synthesis and modification of macromolecules
- II.A.1 Ribosomal protein synthesis and modification [58]
- II.A.2 Ribosome modification and maturation [3]
- II.A.3 Aminoacyl tRNA synthases and their modification [26]
- II.A.4 Nucleoproteins [4]
- II.A.5 DNA replication, repair, recombination and restriction/modification [69]
- II.A.6 Protein translation and modification [15]
- II.A.7 RNA synthesis, RNA modification and DNA transcription [32]
- II.A.8 Polysaccharides (cytoplasmic) [8]
- II.B Degradation of macromolecules
- II.B.1 RNA [6]
- II.B.2 DNA [3]
- II.B.3 Proteins, peptides and glycopeptides [34]
- II.B.4 Polysaccharides, lipopolysaccharides and phospholipids [8]
- II.B.5 Esterases and lipases [27]
- II.B.6 Aromatic hydrocarbons [9]
- II.C Cell envelope
- III Cell Processes
- III.A Transport/binding proteins
- III.A.1 Amino acids [17]
- III.A.2 Cations [31]
- III.A.3 Carbohydrates, organic acids and alcohols [19]
- III.A.4 Anions [34]
- III.A.5 Fatty acid transport [2]
- III.A.6 Efflux proteins [20]
- III.B Chaperones/Heat shock [16]
- III.C Cell division [19]
- III.D Protein and peptide secretion [14]
- III.E Adaptations and atypical conditions [12]
- III.F Detoxification [22]
- IV Other
- IV.A Virulence [38]
- IV.B IS elements, Repeated sequences, and Phage
- IV.C PE and PPE families
- IV.D Antibiotic production and resistance [14]
- IV.E Bacteriocin-like proteins [3]
- IV.F Cytochrome P450 enzymes [22]
- IV.G Coenzyme F420-dependent enzymes [3]
- IV.H Miscellaneous transferases [61]
- IV.I Miscellaneous phosphatases, lyases, and hydrolases [18]
- IV.J Cyclases [6]
- IV.K Chelatases [2]
- V Conserved hypotheticals [915]
- VI Unknowns [606]
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Last Modified Thu Feb 19 15:20:12 2004
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