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Retrieve BLAST result
Fungal Genomes

Data Release Statement

This sequencing centre plans on publishing the completed and annotated sequences in a peer-reviewed journal as soon as possible. Permission of the principal investigator should be obtained before publishing analyses of the sequence/open reading frames/genes on a chromosome or genome scale.


The Sanger Institute fungal sequencing effort is concentrated on pathogens and model organisms. Below is a list of projects funded, underway or completed; all data from these projects are immediately and freely available.

Data are accessible in a number of ways; for each organism there is a BLAST server, allowing you to search the sequences with your own query. Sequences can also be down-loaded directly by FTP. In addition, for those organisms being sequenced using a cosmid approach, finished and annotated cosmids are submitted to EMBL and other public databases (these continue to be accessible by BLAST and FTP from here). The Pombe pages also contain added information such as functional classification of proteins. Enquiries about sequencing or analysis should be directed to the head of the Pathogen group, Julian Parkhill.

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  Organism Size (Mb) Status Funding
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Aspergillus fumigatus  
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  Pilot Study 10 BACs Finished
Pain et al. (2004)
Fungal Genet Biol.
Beowulf Genomics
  Complete genome sequence 35 Finished
Nierman et al. (2005)
Nature
Beowulf Genomics

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Candida dubliniensis  
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  Complete genome sequencing 16 Mb Finished
Jackson et al. (2009)
Genome Res.
Wellcome Trust

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Candida parapsilosis  
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  Complete genome sequencing 13 Mb Published
Butler et al. (2009)
Nature
Wellcome Trust

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Phytophthora infestans  
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  BAC Sequencing 3 BACs Finished
Armstrong et al. (2005)
P.N.A.S.
Scottish Crop Research Institute

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Pneumocystis carinii  
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  Telomeric Cosmid Sequencing 10 Cosmids Finished
Keely et al. (2005)
Genetics
Beowulf Genomics

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Saccharomyces cerevisiae   The yeast genome directory (1997) Nature
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  chromosomes IV,IX,XIII,XVI 3.93 Finished Wellcome Trust
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Schizosaccharomyces pombe   Wood et al. (2002) Nature
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chromosome I 5.7 Mb in finishing Wellcome Trust
European Commission
chromosome II 4.6 Mb in finishing European Commission
chromosome III 3.5 Mb in finishing European Commission
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Last Modified Wed Nov 25 09:36:20 2009

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