ZF-MODELS - http://zf-models.org/
ZF-MODELS resources at the Sanger Institute
The ZF-MODELS (Zebrafish MODELS for Human Development and Disease) is an Integrated Project funded by the European Commission as part of its 6th Framework Programme. Within this project, the following data has been mapped to the zebrafish genome assembly Zv7 and are visible in the Ensembl genome browser:
TILLING project
Microarray, TILLING and Enhancer Detection (CLGY) data mapped to the genome
The available DAS sources for the latest assembly in Danio rerio Ensembl are listed below. The links provide a simple one-click access to attach the DAS tracks to the Ensembl browser. In order to customise the appearance of the features, e.g. colour or grouping, follow the 'DAS sources' menu in the ContigView/GeneView pages.
add source for microarray oligos mapped to Zv7. This will take you to an example page (Ensembl chr 14:36095848-36145848) from which you can continue browsing
add source for TILLING mutations mapped to Zv7. This will take you to an example page (Ensembl chr 1:44090205-44097540) from which you can continue browsing
add source for insertions from the enhancer-detection screening mapped to Zv7. This will take you to an example page (Ensembl chr 9:27293583-27313661) from which you can continue browsing
add source for the ZF_mu myoblast EST library, cloned by Sarah Baxendale at the University of Sheffield, mapped to Zv7. This will take you to an example page (Ensembl chr 30914558-30914877) from which you can continue browsing
The above data are also searchable:
Expression patterns
The expression patterns generated by the Thisse lab have been mapped to Zv7 and are visible as feature tracks within the Ensembl ContigView and GeneView and linked to ZFIN. The data is searchable in BioMart using a controlled vocabulary to define developmental stages or anatomical details.
