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Zebrafish Genome Resources Workshop - Dresden 2005

The Sanger Institute, ZFIN and NCBI organise the "Zebrafish Genome Resources Workshop" to be held concurrently with the 4th European Zebrafish Meeting in Dresden (Germany) on the 14th and 15th of July 2005.


Workshop
The aim of this workshop is to present an overview of the services and data collections that are accessible from the web pages of NCBI, ZFIN and the Sanger Institute. This will be complemented with practical sessions where different ways to access the web-based resources will be demonstrated with examples and exercises. These workshops will be held in a room equipped with computers where the attendees will have the chance to have a hands-on experience.


Program
The workshop will be held in parallel to the poster sessions on the 14th and 15th of July 2005 in Salon Zwinger / Semper. All conference attendees are welcome.
Thursday 14th July 2005 Salon Zwinger / Semper
13:00-13:45 Overview talks (Sanger - ZFIN - NCBI)
13:45-14:40 Questions & Practical session
17:00-19:00 Practical session
Friday 15th July 2005 Salon Zwinger / Semper
13:15-14:00 Overview talks (Sanger - ZFIN - NCBI)
14:00-14:15 Questions
17:20-19:00 Practical session

Material

Overview PowerPoint presentations:

  • Sanger
  • ZFIN
  • NCBI

Select the name of an institution to download a PDF of a particular module.
Where do I start?
  1. Zebrafish Genome Sequencing Page (Sanger)
  2. ZFIN, The Zebrafish Model Organism Database (ZFIN)
  3. Zebrafish Genome Resources and the NCBI Home Page (NCBI)
Maps and Genome Sequence
  1. Ensembl Genome Browser (Sanger)
  2. Vega Genome Browser (Sanger)
  3. Map Viewer Genome Browser (NCBI, ZFIN)
  4. How Do I Find a Zebrafish Gene in the Genome? (Sanger, NCBI)
Genes and Sequences
  1. How Do I Find Information About a Gene? (NCBI, ZFIN)
  2. Does My Gene Have Known Homologues/Orthologues? (Sanger, NCBI, ZFIN)
  3. How Can I Find cDNA Clones for My Gene? (ZFIN)
  4. What Information Is Available For a ZGC Clone and its Protein? (NCBI)
  5. Data Mining in Ensembl with EnsMart (Sanger)
Function and Expression
  1. How Do I Determine Gene Function? (NCBI, ZFIN)
  2. How Can I Find Gene Expression Data? (ZFIN)
  3. How Can I Find Possible Molecular Markers for an Anatomical Structure? (ZFIN)

Contact
If you require more information please contact us .

webmaster@sanger.ac.uk

Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SA, UK  Tel:+44 (0)1223 834244

Last Modified 15-Jul-2005

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