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If you have a clone without mapping information you can still get an idea of where it belongs by looking at its neighbours. They might come with the mapping information (markers etc.) that your clone is lacking.
You can do this in the physical map (FPC database) at http://www.sanger.ac.uk/Projects/D_rerio/WebFPC/zebra/small.shtml or in Vega or EnsEMBL.
If you are in any doubt about the clone name, try http://www.sanger.ac.uk/cgi-bin/humpub/clone_status?species=Zebrafish for finding the internal names that have to be used in the 'search for clone' field.
The FPC database provides contig, clone and marker information.